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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
510.9
nTPM
FANTOM5:
403.7
Scaled Tags Per Million
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
510.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 465.9
2301
Female, age 85, both hemispheres
538.7
2090
Male, age 80, both hemispheres
494.0
2188
Female, age 91, both hemispheres
439.2
1984
Male, age 76, both hemispheres
391.7
Dorsal cochlear nucleus nTPM: 393.7
2378
Male, age 80, both hemispheres
472.3
2802
Male, age 74, right hemisphere
406.9
2187
Female, age 91, both hemispheres
390.9
2058
Male, age 76, both hemispheres
383.4
2370
Male, age 61, both hemispheres
315.3
Dorsal tegmental nucleus nTPM: 299.3
1936
Male, age 76, left hemisphere
375.2
2358
Male, age 61, both hemispheres
331.4
2326
Male, age 74, both hemispheres
264.7
2083
Male, age 80, both hemispheres
225.8
Dorsolateral tegmental area nTPM: 241.8
2337
Male, age 61, both hemispheres
289.0
2360
Male, age 74, both hemispheres
267.4
2654
Male, age 80, both hemispheres
244.6
2141
Male, age 76, both hemispheres
239.7
2751
Female, age 85, both hemispheres
168.3
Kolliker-Fuse nucleus nTPM: 510.9
2315
Male, age 76, right hemisphere
910.9
2793
Female, age 91, left hemisphere
421.9
2163
Male, age 80, both hemispheres
200.1
Lateral lemniscal nuclei nTPM: 300.8
2746
Female, age 85, left hemisphere
522.8
2320
Female, age 91, left hemisphere
283.6
2169
Male, age 76, both hemispheres
257.9
2036
Male, age 80, both hemispheres
241.4
2453
Male, age 74, right hemisphere
198.1
Lateral parabrachial nucleus nTPM: 506.6
2792
Male, age 76, both hemispheres
784.3
2013
Male, age 80, both hemispheres
601.9
2139
Female, age 85, right hemisphere
448.0
2790
Male, age 61, both hemispheres
192.1
Lateral vestibular nucleus nTPM: 360.3
2311
Male, age 80, both hemispheres
439.8
2184
Male, age 76, both hemispheres
280.8
Locus coeruleus nTPM: 332.7
2317
Female, age 72, unknown
386.2
2014
Male, age 55, unknown
373.1
1980
Male, age 76, both hemispheres
363.1
2123
Female, age 91, both hemispheres
337.6
2788
Male, age 74, unknown
311.4
2720
Male, age 74, both hemispheres
282.9
2162
Male, age 80, both hemispheres
275.0
Medial parabrachial nucleus nTPM: 293.4
2170
Female, age 91, both hemispheres
349.8
2854
Male, age 80, both hemispheres
330.1
2786
Male, age 76, both hemispheres
303.8
2463
Female, age 85, right hemisphere
245.8
2156
Male, age 61, both hemispheres
237.8
Medial periolivary nuclei nTPM: 333.2
2081
Male, age 80, both hemispheres
459.2
2063
Male, age 76, both hemispheres
380.2
2791
Male, age 74, right hemisphere
365.4
2458
Female, age 91, both hemispheres
253.3
2171
Female, age 85, both hemispheres
207.7
Motor facial nucleus nTPM: 327.4
2126
Male, age 61, both hemispheres
406.5
2697
Female, age 85, both hemispheres
377.6
2062
Male, age 76, both hemispheres
353.4
2795
Female, age 91, both hemispheres
314.6
2365
Male, age 74, right hemisphere
295.4
2327
Male, age 80, both hemispheres
216.7
Motor trigeminal nucleus nTPM: 298.5
2335
Male, age 61, both hemispheres
308.4
2079
Male, age 80, both hemispheres
306.6
2309
Male, age 76, both hemispheres
295.9
2321
Female, age 91, both hemispheres
293.0
2560
Male, age 74, both hemispheres
288.5
Nuclei of the trapezoid body nTPM: 302.6
1983
Male, age 76, both hemispheres
383.5
2166
Male, age 80, both hemispheres
367.2
2368
Female, age 91, both hemispheres
288.8
2735
Female, age 85, both hemispheres
256.7
2159
Male, age 61, both hemispheres
216.6
Nucleus raphe magnus nTPM: 270.0
2051
Male, age 76, both hemispheres
441.4
2328
Male, age 80, both hemispheres
275.7
2455
Male, age 74, both hemispheres
234.8
2459
Female, age 91, both hemispheres
231.0
2160
Male, age 61, both hemispheres
224.5
2172
Female, age 85, both hemispheres
212.7
Paramedian reticular nucleus nTPM: 237.3
2052
Male, age 76, both hemispheres
352.7
2050
Female, age 85, both hemispheres
228.3
2313
Male, age 61, both hemispheres
184.9
2057
Male, age 80, both hemispheres
183.4
Pedunculopontine tegmental nucleus nTPM: 246.3
2334
Male, age 80, both hemispheres
282.7
2338
Male, age 61, both hemispheres
244.3
1921
Female, age 85, both hemispheres
211.9
Pontine nuclei nTPM: 308.5
2115
Male, age 80, left hemisphere
550.1
2319
Female, age 91, both hemispheres
388.1
2109
Female, age 72, unknown
362.2
1968
Male, age 76, left hemisphere
334.6
1863
Male, age 55, unknown
262.1
2787
Female, age 85, both hemispheres
254.5
2727
Male, age 61, right hemisphere
160.3
2454
Male, age 74, left hemisphere
156.0
Pontine raphe nucleus nTPM: 222.4
2853
Male, age 76, midline
240.3
2122
Female, age 85, midline
204.5
Posteroventral cochlear nucleus nTPM: 356.6
2341
Male, age 80, both hemispheres
518.9
2135
Female, age 91, both hemispheres
452.3
2371
Male, age 61, both hemispheres
375.2
2070
Male, age 76, both hemispheres
243.1
2752
Female, age 85, both hemispheres
193.7
Principal sensory trigeminal nucleus nTPM: 305.3
2324
Male, age 76, both hemispheres
358.8
2367
Female, age 91, left hemisphere
350.5
2158
Male, age 61, both hemispheres
275.1
2008
Male, age 80, left hemisphere
236.9
Reticular pontine nucleus, caudal nTPM: 265.2
2092
Male, age 76, both hemispheres
424.1
2457
Female, age 91, both hemispheres
239.7
2332
Male, age 80, right hemisphere
202.5
2559
Male, age 74, both hemispheres
194.4
Reticular pontine nucleus, oral nTPM: 226.4
2366
Female, age 91, both hemispheres
346.5
2167
Male, age 76, both hemispheres
219.7
2361
Male, age 74, both hemispheres
199.1
2012
Female, age 85, both hemispheres
198.3
1939
Male, age 80, both hemispheres
168.4
Reticulotegmental nucleus nTPM: 235.4
2325
Male, age 76, both hemispheres
277.1
2322
Female, age 91, both hemispheres
260.8
2452
Male, age 74, both hemispheres
206.5
2333
Male, age 80, both hemispheres
197.5
Spinal trigeminal nucleus, oral nTPM: 260.7
1978
Male, age 76, both hemispheres
312.1
2164
Male, age 80, both hemispheres
242.5
2737
Female, age 85, both hemispheres
227.6
Subcoeruleus area nTPM: 229.4
2089
Male, age 76, left hemisphere
296.7
2451
Male, age 74, both hemispheres
269.8
1958
Male, age 80, both hemispheres
236.7
2323
Female, age 91, left hemisphere
197.2
2369
Female, age 85, left hemisphere
146.6
Superior olive nTPM: 340.7
2020
Male, age 76, both hemispheres
473.5
2561
Female, age 91, both hemispheres
348.7
2364
Male, age 74, right hemisphere
335.3
2329
Male, age 80, right hemisphere
288.6
1875
Female, age 85, both hemispheres
257.2
Ventral periolivary nuclei nTPM: 333.1
2023
Male, age 76, both hemispheres
459.7
2130
Female, age 85, both hemispheres
319.7
2794
Female, age 91, left hemisphere
297.7
2165
Male, age 80, both hemispheres
255.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 321.3
1959
Male, age 76, both hemispheres
421.0
2840
Female, age 85, both hemispheres
390.3
2161
Male, age 80, both hemispheres
387.9
2456
Female, age 91, both hemispheres
278.7
2449
Male, age 74, both hemispheres
249.6
2359
Male, age 61, both hemispheres
200.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
