We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NDUFS5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NDUFS5
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:608.6 nTPM
HPA Brain:177.6 nTPM
GTEx:608.6 nTPM
FANTOM5:549.6 Scaled Tags Per Million
Pig:203.4 nTPM
Mouse:461.9 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042582
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 171.1
2846 Female, age 79, unknown 199.0
2481 Female, age 94, left hemisphere 195.9
1857 Female, age 85, left hemisphere 185.7
2290 Female, age 72, unknown 182.2
1854 Male, age 80, left hemisphere 178.3
1781 Male, age 74, unknown 160.9
2288 Male, age 75, left hemisphere 143.1
2289 Male, age 61, right hemisphere 124.0
Globus pallidus, externus
nTPM: 124.3
2772 Female, age 79, unknown 154.9
1996 Male, age 80, right hemisphere 143.5
2395 Male, age 75, both hemispheres 122.7
2567 Female, age 72, unknown 103.7
2646 Male, age 61, right hemisphere 96.4
Globus pallidus, internus
nTPM: 132.8
2287 Male, age 75, right hemisphere 167.5
2483 Female, age 94, right hemisphere 151.4
1818 Male, age 74, unknown 133.4
2778 Female, age 91, both hemispheres 128.6
2037 Male, age 80, right hemisphere 123.4
2566 Female, age 72, unknown 121.8
2111 Female, age 85, right hemisphere 103.9
Nucleus accumbens
nTPM: 177.6
1856 Female, age 91, right hemisphere 236.1
2698 Female, age 72, unknown 219.4
1783 Male, age 74, unknown 173.6
2391 Female, age 94, left hemisphere 173.2
1806 Female, age 85, left hemisphere 173.1
2824 Male, age 61, right hemisphere 170.8
2286 Male, age 75, left hemisphere 155.7
2732 Male, age 80, right hemisphere 118.8
Nucleus basalis of Meynert
nTPM: 139.3
2821 Male, age 75, both hemispheres 177.9
2393 Male, age 80, right hemisphere 158.3
2484 Female, age 94, left hemisphere 131.4
2569 Male, age 61, both hemispheres 89.6
Nucleus of the diagonal band
nTPM: 170.2
1812 Female, age 91, both hemispheres 189.2
2195 Female, age 85, both hemispheres 184.8
2775 Male, age 80, right hemisphere 181.7
2029 Male, age 61, right hemisphere 151.8
1979 Male, age 74, unknown 143.6
Putamen
nTPM: 161.8
1937 Female, age 91, right hemisphere 187.8
2482 Female, age 94, left hemisphere 182.4
1838 Male, age 80, right hemisphere 180.7
1829 Male, age 74, unknown 156.2
2466 Female, age 79, unknown 150.6
2647 Male, age 75, left hemisphere 143.5
2489 Female, age 72, unknown 131.0
Septal nuclei
nTPM: 158.5
2629 Female, age 94, right hemisphere 209.1
1960 Male, age 74, unknown 200.6
2031 Female, age 72, unknown 168.8
2059 Female, age 85, both hemispheres 154.1
2009 Female, age 91, both hemispheres 151.3
2199 Male, age 80, right hemisphere 136.1
2394 Male, age 61, left hemisphere 89.6
Stria terminalis, bed nucleus
nTPM: 160.4
1974 Female, age 91, both hemispheres 192.3
2486 Female, age 94, both hemispheres 158.0
2201 Male, age 74, unknown 130.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

608.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 531.1
Samples: 246

Max nTPM: 1510.5
Min nTPM: 207.6
Std nTPM: 184.6
Median nTPM: 511.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1510.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1440.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1280.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1257.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1071.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 963.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 948.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 896.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 888.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 876.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 864.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 861.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 843.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 827.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 816.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 801.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 797.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 791.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 775.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 771.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 764.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 764.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 753.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 736.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 721.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 715.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 711.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 708.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 706.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 700.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 699.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 696.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 692.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 692.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 689.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 687.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 687.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 679.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 677.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 676.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 675.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 673.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 665.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 665.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 655.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 653.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 652.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 651.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 648.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 647.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 641.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 637.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 624.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 624.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 615.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 615.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 614.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 611.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 609.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 606.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 605.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 603.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 603.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 598.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 596.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 595.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 592.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 591.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 591.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 587.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 587.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 586.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 584.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 582.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 580.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 578.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 577.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 574.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 574.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 574.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 573.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 569.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 566.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 565.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 564.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 563.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 562.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 562.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 557.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 555.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 555.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 555.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 555.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 549.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 549.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 548.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 547.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 546.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 543.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 543.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 538.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 537.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 533.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 532.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 532.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 529.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 529.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 529.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 528.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 526.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 524.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 524.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 521.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 521.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 521.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 520.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 517.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 517.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 515.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 515.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 513.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 513.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 513.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 509.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 507.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 505.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 505.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 505.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 505.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 504.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 504.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 499.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 497.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 497.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 494.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 494.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 494.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 493.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 492.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 491.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 489.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 488.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 488.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 487.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 486.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 485.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 477.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 476.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 476.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 475.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 474.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 472.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 468.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 467.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 466.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 464.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 464.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 463.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 461.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 460.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 458.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 451.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 450.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 446.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 445.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 441.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 438.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 437.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 436.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 434.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 429.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 424.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 422.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 421.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 420.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 417.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 416.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 415.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 412.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 411.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 409.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 409.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 408.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 408.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 406.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 406.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 406.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 405.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 405.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 401.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 401.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 394.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 393.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 388.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 385.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 382.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 377.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 375.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 372.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 370.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 369.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 368.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 368.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 368.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 367.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 364.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 361.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 361.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 361.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 361.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 357.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 354.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 354.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 353.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 353.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 350.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 347.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 345.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 345.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 336.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 336.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 336.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 334.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 329.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 326.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 324.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 322.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 321.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 317.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 315.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 314.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 310.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 307.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 306.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 305.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 292.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 292.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 291.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 287.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 285.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 269.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 268.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 268.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 257.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 236.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 207.6
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 608.6
Samples: 246

Max nTPM: 1387.0
Min nTPM: 281.6
Std nTPM: 188.6
Median nTPM: 575.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1387.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1366.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1299.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1191.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1165.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1157.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1115.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1045.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1009.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 973.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 958.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 956.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 952.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 926.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 893.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 887.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 886.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 881.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 864.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 862.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 857.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 855.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 854.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 853.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 852.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 850.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 835.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 828.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 825.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 818.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 815.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 811.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 811.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 797.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 795.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 791.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 790.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 787.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 776.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 769.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 768.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 762.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 760.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 759.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 754.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 754.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 753.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 747.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 747.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 745.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 738.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 736.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 733.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 725.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 724.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 723.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 721.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 720.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 719.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 711.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 710.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 707.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 702.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 701.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 701.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 699.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 699.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 699.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 698.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 698.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 697.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 689.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 686.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 682.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 680.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 674.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 672.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 671.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 669.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 666.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 662.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 660.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 660.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 660.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 654.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 647.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 645.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 637.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 636.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 636.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 635.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 634.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 634.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 634.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 630.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 629.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 621.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 620.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 619.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 619.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 619.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 618.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 618.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 614.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 613.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 612.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 608.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 607.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 605.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 605.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 603.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 603.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 601.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 597.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 591.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 589.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 587.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 584.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 584.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 579.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 579.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 577.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 576.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 573.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 572.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 571.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 569.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 569.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 566.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 565.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 561.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 558.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 549.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 549.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 547.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 545.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 542.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 541.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 537.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 535.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 535.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 533.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 531.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 531.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 531.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 530.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 527.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 526.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 524.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 524.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 524.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 524.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 524.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 523.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 522.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 522.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 521.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 520.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 518.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 516.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 516.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 514.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 514.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 509.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 506.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 506.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 505.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 504.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 503.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 502.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 502.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 502.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 500.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 499.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 499.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 498.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 497.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 497.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 494.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 492.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 485.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 483.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 482.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 481.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 481.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 473.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 473.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 472.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 472.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 470.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 468.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 463.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 463.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 463.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 459.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 455.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 454.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 454.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 451.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 449.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 446.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 446.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 445.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 445.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 445.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 443.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 438.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 435.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 434.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 431.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 430.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 429.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 422.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 420.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 419.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 417.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 408.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 405.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 404.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 403.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 402.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 401.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 399.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 398.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 398.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 394.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 392.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 391.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 390.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 389.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 383.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 378.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 369.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 369.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 368.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 357.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 357.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 353.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 350.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 334.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 330.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 329.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 309.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 285.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 282.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 281.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 564.2
Samples: 205

Max nTPM: 1090.9
Min nTPM: 270.1
Std nTPM: 167.2
Median nTPM: 542.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1090.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1057.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 996.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 981.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 968.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 964.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 936.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 908.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 907.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 891.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 890.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 883.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 882.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 882.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 873.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 869.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 827.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 818.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 807.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 794.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 792.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 782.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 781.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 777.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 774.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 758.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 749.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 747.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 747.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 745.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 730.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 730.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 729.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 700.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 697.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 694.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 689.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 687.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 686.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 684.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 684.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 684.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 681.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 681.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 669.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 667.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 665.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 665.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 665.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 663.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 662.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 662.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 661.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 659.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 656.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 656.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 655.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 655.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 652.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 639.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 635.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 635.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 633.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 632.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 631.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 631.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 630.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 630.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 620.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 618.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 615.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 612.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 612.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 606.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 603.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 601.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 598.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 597.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 597.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 595.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 594.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 592.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 590.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 587.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 586.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 586.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 583.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 579.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 578.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 577.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 576.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 569.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 566.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 562.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 562.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 561.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 560.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 556.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 553.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 552.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 548.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 547.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 542.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 538.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 537.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 533.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 532.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 531.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 525.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 517.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 516.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 515.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 513.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 510.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 507.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 507.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 506.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 504.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 503.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 503.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 502.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 502.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 501.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 497.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 496.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 496.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 496.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 495.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 494.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 494.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 493.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 492.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 490.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 489.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 489.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 489.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 488.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 482.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 478.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 477.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 477.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 476.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 473.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 467.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 456.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 456.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 456.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 456.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 455.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 454.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 451.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 446.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 445.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 441.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 440.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 436.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 433.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 432.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 431.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 429.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 428.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 428.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 427.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 419.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 416.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 414.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 414.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 409.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 406.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 404.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 404.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 392.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 390.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 388.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 386.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 385.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 385.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 384.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 384.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 383.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 383.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 381.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 374.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 372.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 372.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 370.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 366.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 362.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 358.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 350.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 341.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 341.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 337.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 331.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 322.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 307.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 302.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 299.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 297.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 297.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 292.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 280.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 277.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 277.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 270.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

549.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 411.8
FF:10164-103B2 76 years, female 411.8
Nucleus accumbens
Scaled Tags Per Million: 454.4
FF:10037-101F1 23-56 years, mixed 454.4
Putamen
Scaled Tags Per Million: 549.6
FF:10176-103C5 60 years, female 549.6
Globus pallidus
Scaled Tags Per Million: 461.3
FF:10175-103C4 60 years, female 676.4
FF:10161-103A8 76 years, female 246.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.4
Pig sample Sample description nTPM
Caudate
nTPM: 173.2
Samples: 4

Max nTPM: 184.2
Min nTPM: 151.3
Sample A Female 176.0
Sample B Female 184.2
Sample C Male 181.2
Sample D Male 151.3
Putamen
nTPM: 203.4
Samples: 4

Max nTPM: 262.1
Min nTPM: 176.4
Sample A Female 191.2
Sample B Female 184.0
Sample C Male 262.1
Sample D Male 176.4
Septum
nTPM: 180.3
Samples: 4

Max nTPM: 208.4
Min nTPM: 145.9
Sample A Female 208.4
Sample B Female 190.5
Sample C Male 176.5
Sample D Male 145.9
Ventral pallidum
nTPM: 171.8
Samples: 4

Max nTPM: 214.2
Min nTPM: 148.3
Sample A Female 171.9
Sample B Female 214.2
Sample C Male 152.6
Sample D Male 148.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

461.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 442.3
Samples: 4

Max nTPM: 459.5
Min nTPM: 423.1
Sample A Male 423.1
Sample B Male 444.5
Sample C Female 441.9
Sample D Female 459.5
Septum
nTPM: 460.4
Samples: 4

Max nTPM: 513.0
Min nTPM: 408.7
Sample A Male 408.7
Sample B Male 505.3
Sample C Female 513.0
Sample D Female 414.4
Ventral forebrain
nTPM: 461.9
Samples: 4

Max nTPM: 551.3
Min nTPM: 402.5
Sample A Male 402.5
Sample B Male 449.0
Sample C Female 551.3
Sample D Female 444.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
68076547 Antisense, RP_040923_02_F08, Mouse strain C57BL/6J (56 days, male) 0.7
70918976 Antisense, RP_050712_04_H06, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.9
68076547 Antisense, RP_040923_02_F08, Mouse strain C57BL/6J (56 days, male) 1.5
70918976 Antisense, RP_050712_04_H06, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org