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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: High
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Low
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: High
Processes in molecular layer: Not detected
Processes in white matter: High
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: High
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:336.0 nTPM
HPA Brain:162.9 nTPM
GTEx:336.0 nTPM
FANTOM5:314.0 Scaled Tags Per Million
Pig:128.2 nTPM
Mouse:757.1 nTPM
Allen mouse:1.4 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042582
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane High
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites High
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Low
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane High
Molecular layer cells - nucleus Not detected
Processes in granular layer High
Processes in molecular layer Not detected
Processes in white matter High
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core High
White matter cells - cytoplasm/membrane High
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 135.9
1768 Female, age 72, unknown 188.3
2101 Male, age 74, right hemisphere 169.5
2006 Male, age 61, right hemisphere 144.9
2055 Female, age 91, right hemisphere 134.4
1774 Male, age 80, left hemisphere 132.4
1769 Male, age 76, right hemisphere 125.4
2003 Female, age 85, right hemisphere 103.2
1788 Male, age 55, unknown 89.3
Cerebellar nuclei
nTPM: 162.9
2783 Female, age 72, unknown 202.1
2882 Male, age 76, left hemisphere 198.9
2177 Female, age 85, both hemispheres 173.0
2175 Male, age 61, right hemisphere 170.6
1879 Male, age 55, unknown 153.1
1871 Male, age 74, unknown 150.7
1966 Female, age 91, left hemisphere 146.0
2318 Male, age 74, left hemisphere 139.0
2005 Male, age 80, left hemisphere 132.9
Flocculonodular lobe
nTPM: 121.6
1765 Male, age 55, unknown 144.4
1771 Male, age 80, left hemisphere 143.3
1792 Male, age 74, unknown 121.8
2176 Female, age 91, right hemisphere 121.7
2004 Male, age 61, right hemisphere 116.7
1767 Male, age 76, left hemisphere 112.4
1835 Female, age 85, right hemisphere 91.1
Vermis
nTPM: 129.8
1751 Male, age 74, right hemisphere 191.3
2834 Male, age 80, left hemisphere 150.8
1778 Female, age 91, left hemisphere 145.6
1928 Female, age 72, unknown 141.4
1766 Male, age 55, unknown 140.6
1770 Male, age 76, left hemisphere 117.7
1825 Male, age 74, unknown 107.0
1988 Female, age 85, left hemisphere 97.1
2460 Male, age 61, both hemispheres 76.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

336.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 336.0
Samples: 215

Max nTPM: 740.9
Min nTPM: 154.7
Std nTPM: 93.2
Median nTPM: 321.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 740.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 696.7
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 670.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 638.4
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 606.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 590.7
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 580.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 572.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 564.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 512.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 503.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 502.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 499.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 495.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 493.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 489.2
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 479.6
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 467.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 458.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 454.1
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 443.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 434.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 434.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 431.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 427.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 424.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 420.6
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 419.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 415.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 410.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 404.6
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 403.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 403.5
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 403.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 402.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 400.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 399.2
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 397.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 396.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 394.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 392.5
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 392.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 389.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 389.4
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 388.1
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 383.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 383.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 382.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 380.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 375.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 374.7
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 373.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 371.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 371.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 370.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 370.4
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 369.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 368.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 368.1
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 367.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 366.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 364.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 364.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 364.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 363.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 363.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 362.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 362.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 362.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 361.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 359.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 357.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 356.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 355.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 355.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 355.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 354.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 352.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 352.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 351.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 351.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 350.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 350.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 349.8
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 349.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 349.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 346.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 344.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 343.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 342.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 340.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 339.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 337.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 334.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 334.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 334.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 334.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 332.2
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 331.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 330.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 329.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 329.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 328.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 328.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 326.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 322.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 322.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 321.8
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 321.4
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 318.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 318.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 318.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 318.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 316.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 316.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 315.8
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 314.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 314.3
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 314.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 313.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 312.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 312.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 311.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 309.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 309.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 308.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 304.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 303.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 303.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 302.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 301.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 300.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 300.6
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 299.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 299.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 299.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 298.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 298.3
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 298.2
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 297.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 297.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 297.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 295.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 294.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 291.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 291.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 291.2
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 290.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 290.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 289.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 288.2
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 287.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 286.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 285.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 284.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 284.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 283.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 282.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 280.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 280.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 279.5
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 278.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 274.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 272.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 270.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 270.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 270.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 270.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 268.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 268.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 265.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 262.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 261.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 261.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 260.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 259.9
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 259.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 258.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 257.2
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 253.9
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 251.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 250.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 249.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 248.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 248.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 245.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 245.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 245.3
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 242.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 242.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 241.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 241.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 238.4
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 236.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 236.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 236.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 231.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 227.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 227.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 225.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 224.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 223.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 219.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 219.5
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 217.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 216.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 214.1
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 202.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 196.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 196.1
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 196.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 178.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 178.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 167.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 154.7
Show allShow less
Brain - Cerebellum
Average nTPM: 275.1
Samples: 241

Max nTPM: 419.0
Min nTPM: 166.6
Std nTPM: 41.1
Median nTPM: 275.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 419.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 376.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 372.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 371.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 366.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 365.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 356.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 350.3
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 349.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 343.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 343.9
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 343.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 341.5
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 340.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 340.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 337.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 334.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 332.8
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 332.1
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 330.5
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 330.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 330.0
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 328.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 327.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 326.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 326.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 326.1
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 326.0
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 325.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 324.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 320.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 319.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 318.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 318.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 317.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 317.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 317.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 316.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 315.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 315.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 314.7
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 314.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 314.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 311.7
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 310.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 310.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 310.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 309.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 309.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 309.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 308.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 308.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 307.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 305.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 305.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 305.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 305.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 304.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 303.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 302.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 301.8
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 301.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 301.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 300.0
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 299.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 299.4
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 298.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 298.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 298.0
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 296.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 295.4
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 294.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 293.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 292.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 292.0
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 292.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 291.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 291.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 291.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 291.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 290.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 290.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 289.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 288.9
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 288.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 288.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 288.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 287.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 287.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 287.6
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 286.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 286.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 286.1
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 285.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 285.4
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 284.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 283.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 282.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 282.6
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 282.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 282.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 282.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 281.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 281.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 280.9
GTEX-17HII-2926-SM-79OMK 50-59 years, male 280.9
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 280.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 280.4
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 280.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 278.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 278.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 278.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 278.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 277.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 276.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 276.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 276.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 276.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 275.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 275.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 275.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 274.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 274.9
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 274.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 273.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 273.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 273.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 273.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 271.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 271.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 270.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 269.7
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 269.4
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 269.4
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 269.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 268.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 268.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 267.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 266.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 266.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 266.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 266.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 265.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 265.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 265.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 265.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 264.7
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 263.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 263.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 262.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 262.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 262.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 262.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 262.0
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 261.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 261.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 261.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 261.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 260.9
GTEX-144GL-2926-SM-5O99F 50-59 years, male 259.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 259.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 258.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 258.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 258.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 258.4
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 257.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 257.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 256.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 256.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 256.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 255.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 252.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 252.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 252.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 250.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 249.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 249.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 248.9
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 248.4
GTEX-1B933-3026-SM-731DB 50-59 years, female 247.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 246.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 245.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 244.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 244.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 244.1
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 243.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 243.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 243.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 243.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 242.3
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 241.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 240.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 239.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 239.4
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 238.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 238.7
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 238.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 237.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 236.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 236.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 235.9
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 235.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 235.3
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 235.1
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 234.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 233.8
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 233.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 233.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 231.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 229.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 228.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 227.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 227.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 226.7
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 226.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 225.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 224.3
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 223.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 223.2
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 222.0
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 219.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 218.8
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 218.1
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 217.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 216.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 211.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 210.2
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 208.5
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 206.7
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 201.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 201.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 200.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 200.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 198.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 198.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 187.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 185.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 183.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 183.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 175.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 166.6
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

314.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 314.0
FF:10083-102B2 22-68 years, mixed 416.4
FF:10166-103B4 76 years, female 211.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 128.2
Samples: 4

Max nTPM: 181.9
Min nTPM: 102.8
Sample A Female 181.9
Sample B Female 111.3
Sample C Male 116.8
Sample D Male 102.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

757.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 757.1
Samples: 4

Max nTPM: 787.3
Min nTPM: 728.9
Sample A Male 728.9
Sample B Male 742.3
Sample C Female 770.0
Sample D Female 787.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 1.4
68076547 Antisense, RP_040923_02_F08, Mouse strain C57BL/6J (56 days, male) 1.8
70918976 Antisense, RP_050712_04_H06, Mouse strain C57BL/6J (56 days, male) 0.9

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