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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:199.0 nTPM
FANTOM5:1578.4 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.0
Sample id Sample description nTPM
Area postrema
nTPM: 143.4
2054 Male, age 76, both hemispheres 201.9
2799 Male, age 61, both hemispheres 145.1
2306 Male, age 80, both hemispheres 83.2
Dorsal medullary reticular nucleus
nTPM: 108.4
2040 Female, age 85, both hemispheres 117.6
2088 Male, age 76, both hemispheres 103.9
2373 Male, age 61, both hemispheres 103.8
Dorsal motor vagal complex
nTPM: 113.2
2797 Male, age 61, both hemispheres 149.2
2185 Male, age 76, both hemispheres 146.7
2813 Female, age 72, unknown 123.8
2000 Male, age 74, unknown 123.0
2844 Male, age 55, unknown 106.6
2133 Female, age 91, both hemispheres 102.6
2643 Male, age 74, both hemispheres 96.1
2807 Female, age 85, both hemispheres 57.3
Gigantocellular reticular nuclei, medullary
nTPM: 130.1
2022 Male, age 76, right hemisphere 182.8
1876 Female, age 85, both hemispheres 154.5
2462 Male, age 74, both hemispheres 123.3
2387 Female, age 91, both hemispheres 122.6
2314 Male, age 61, both hemispheres 105.4
2310 Male, age 80, both hemispheres 92.0
Gigantocellular reticular nuclei, pars
nTPM: 104.1
2084 Female, age 85, both hemispheres 146.5
2336 Male, age 61, both hemispheres 97.0
2168 Male, age 76, both hemispheres 95.9
2706 Male, age 80, both hemispheres 95.9
2330 Male, age 80, both hemispheres 85.4
Inferior olive
nTPM: 157.2
2563 Male, age 74, both hemispheres 204.7
2085 Female, age 85, both hemispheres 169.1
2178 Male, age 61, both hemispheres 142.8
2379 Male, age 80, both hemispheres 140.5
2628 Female, age 91, both hemispheres 128.6
Lateral medullary reticular nucleus
nTPM: 116.4
2044 Male, age 76, both hemispheres 211.3
2804 Female, age 91, both hemispheres 125.7
2374 Male, age 61, both hemispheres 113.4
2190 Female, age 85, both hemispheres 98.6
2305 Male, age 74, both hemispheres 77.3
2852 Male, age 80, both hemispheres 72.1
Medial olivary nucleus
nTPM: 137.6
1962 Male, age 76, both hemispheres 185.7
2138 Female, age 91, both hemispheres 177.6
2851 Male, age 80, both hemispheres 95.7
1943 Male, age 61, both hemispheres 91.2
Medial vestibular nucleus
nTPM: 143.8
2134 Male, age 76, both hemispheres 167.1
2803 Female, age 91, both hemispheres 163.0
2093 Male, age 80, both hemispheres 144.9
2624 Male, age 61, both hemispheres 142.7
2743 Female, age 85, both hemispheres 138.1
2801 Male, age 74, both hemispheres 106.7
Motor hypoglossal nucleus
nTPM: 98.8
2277 Male, age 76, both hemispheres 147.6
2125 Female, age 91, both hemispheres 122.5
2461 Male, age 61, both hemispheres 112.5
2182 Male, age 80, both hemispheres 56.0
2132 Female, age 85, both hemispheres 55.3
Nucleus ambiguus
nTPM: 156.1
2071 Male, age 76, both hemispheres 264.0
2096 Female, age 85, both hemispheres 48.2
Nucleus cuneatus
nTPM: 109.5
2564 Male, age 74, both hemispheres 152.9
2562 Male, age 61, both hemispheres 139.1
2376 Male, age 61, both hemispheres 122.8
2100 Male, age 76, both hemispheres 116.8
2131 Male, age 76, both hemispheres 108.8
2805 Female, age 91, both hemispheres 100.4
2808 Female, age 85, both hemispheres 93.0
2380 Male, age 80, both hemispheres 82.8
2381 Male, age 80, both hemispheres 68.5
Nucleus gracilis
nTPM: 90.0
2627 Male, age 74, both hemispheres 125.2
2299 Female, age 85, both hemispheres 82.4
2382 Male, age 80, both hemispheres 62.4
Nucleus raphe obscurus
nTPM: 130.2
2142 Male, age 76, midline 209.2
2845 Female, age 85, midline 94.3
2800 Male, age 61, midline 87.3
Nucleus raphe pallidus
nTPM: 114.2
2145 Male, age 76, midline 140.7
1924 Male, age 61, midline 112.2
2183 Male, age 80, midline 89.7
Nucleus tractus solitarii
nTPM: 108.2
2144 Female, age 91, right hemisphere 172.3
2656 Male, age 76, both hemispheres 117.4
2191 Female, age 85, both hemispheres 94.5
2307 Male, age 80, both hemispheres 48.4
Parvicellular reticular nuclei
nTPM: 131.2
2095 Male, age 76, both hemispheres 160.6
2119 Male, age 80, both hemispheres 145.1
2558 Male, age 74, both hemispheres 87.8
Parvicellular reticular nuclei, medullary
nTPM: 125.6
2189 Female, age 91, both hemispheres 139.4
2091 Female, age 85, both hemispheres 121.8
2181 Male, age 80, left hemisphere 115.5
Peritrigeminal nucleus
nTPM: 137.2
2136 Male, age 76, both hemispheres 199.8
2067 Female, age 85, both hemispheres 120.8
2179 Male, age 61, both hemispheres 90.9
Prepositus hypoglossal nucleus
nTPM: 125.5
2086 Male, age 80, both hemispheres 126.2
2855 Female, age 85, right hemisphere 124.7
Spinal trigeminal nucleus, caudal
nTPM: 105.9
2447 Male, age 76, both hemispheres 144.8
2390 Female, age 91, both hemispheres 130.7
2312 Male, age 61, both hemispheres 98.9
2642 Male, age 74, both hemispheres 85.8
2308 Male, age 80, both hemispheres 69.1
Spinal trigeminal nucleus, interpolar
nTPM: 144.0
2066 Male, age 76, right hemisphere 180.9
2625 Male, age 61, both hemispheres 175.9
2033 Male, age 80, both hemispheres 141.8
2389 Female, age 91, both hemispheres 135.2
2386 Female, age 85, both hemispheres 86.4
Spinal vestibular nucleus
nTPM: 143.7
2748 Male, age 76, both hemispheres 186.4
2806 Female, age 85, both hemispheres 152.1
2796 Male, age 61, both hemispheres 139.6
2186 Female, age 91, both hemispheres 134.3
2384 Male, age 74, both hemispheres 128.7
2780 Male, age 80, both hemispheres 121.3
Superior vestibular nucleus
nTPM: 199.0
2061 Male, age 76, both hemispheres 271.5
2383 Male, age 74, both hemispheres 183.7
2015 Male, age 80, both hemispheres 141.9
Ventral medullary reticular nucleus
nTPM: 121.0
2372 Male, age 61, both hemispheres 125.1
2060 Male, age 76, both hemispheres 116.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 121.3
1986 Male, age 76, both hemispheres 228.5
2302 Female, age 91, both hemispheres 120.9
2180 Male, age 61, both hemispheres 93.1
2741 Female, age 85, both hemispheres 91.6
2118 Male, age 80, both hemispheres 72.4

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1578.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1578.4
FF:10174-103C3 60 years, female 3225.8
FF:10038-101F2 18-64 years, mixed 761.9
FF:10155-103A2 76 years, female 747.4

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