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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
183.6
nTPM
FANTOM5:
2132.3
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
183.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 100.5
1984
Male, age 76, both hemispheres
148.7
2301
Female, age 85, both hemispheres
99.6
2090
Male, age 80, both hemispheres
79.8
2188
Female, age 91, both hemispheres
73.8
Dorsal cochlear nucleus nTPM: 150.9
2370
Male, age 61, both hemispheres
182.5
2058
Male, age 76, both hemispheres
173.1
2802
Male, age 74, right hemisphere
159.1
2378
Male, age 80, both hemispheres
124.9
2187
Female, age 91, both hemispheres
114.6
Dorsal tegmental nucleus nTPM: 154.0
1936
Male, age 76, left hemisphere
223.1
2083
Male, age 80, both hemispheres
176.0
2326
Male, age 74, both hemispheres
116.9
2358
Male, age 61, both hemispheres
100.0
Dorsolateral tegmental area nTPM: 143.2
2654
Male, age 80, both hemispheres
199.6
2141
Male, age 76, both hemispheres
157.1
2360
Male, age 74, both hemispheres
151.3
2751
Female, age 85, both hemispheres
123.6
2337
Male, age 61, both hemispheres
84.4
Kolliker-Fuse nucleus nTPM: 183.6
2315
Male, age 76, right hemisphere
291.3
2163
Male, age 80, both hemispheres
181.5
2793
Female, age 91, left hemisphere
78.1
Lateral lemniscal nuclei nTPM: 95.4
2036
Male, age 80, both hemispheres
130.6
2169
Male, age 76, both hemispheres
117.9
2453
Male, age 74, right hemisphere
94.4
2746
Female, age 85, left hemisphere
73.7
2320
Female, age 91, left hemisphere
60.6
Lateral parabrachial nucleus nTPM: 124.4
2792
Male, age 76, both hemispheres
203.4
2139
Female, age 85, right hemisphere
119.5
2013
Male, age 80, both hemispheres
96.2
2790
Male, age 61, both hemispheres
78.5
Lateral vestibular nucleus nTPM: 139.0
2184
Male, age 76, both hemispheres
172.5
2311
Male, age 80, both hemispheres
105.5
Locus coeruleus nTPM: 171.2
2014
Male, age 55, unknown
270.3
2317
Female, age 72, unknown
217.5
1980
Male, age 76, both hemispheres
170.8
2123
Female, age 91, both hemispheres
169.3
2788
Male, age 74, unknown
139.5
2720
Male, age 74, both hemispheres
123.4
2162
Male, age 80, both hemispheres
107.4
Medial parabrachial nucleus nTPM: 128.3
2786
Male, age 76, both hemispheres
179.8
2854
Male, age 80, both hemispheres
129.0
2170
Female, age 91, both hemispheres
123.9
2156
Male, age 61, both hemispheres
105.7
2463
Female, age 85, right hemisphere
103.1
Medial periolivary nuclei nTPM: 90.6
2791
Male, age 74, right hemisphere
119.2
2063
Male, age 76, both hemispheres
109.2
2458
Female, age 91, both hemispheres
81.0
2081
Male, age 80, both hemispheres
74.1
2171
Female, age 85, both hemispheres
69.4
Motor facial nucleus nTPM: 98.4
2795
Female, age 91, both hemispheres
134.0
2062
Male, age 76, both hemispheres
115.2
2126
Male, age 61, both hemispheres
102.6
2365
Male, age 74, right hemisphere
93.1
2327
Male, age 80, both hemispheres
91.9
2697
Female, age 85, both hemispheres
53.8
Motor trigeminal nucleus nTPM: 111.1
2309
Male, age 76, both hemispheres
178.7
2335
Male, age 61, both hemispheres
113.3
2560
Male, age 74, both hemispheres
96.3
2079
Male, age 80, both hemispheres
86.8
2321
Female, age 91, both hemispheres
80.2
Nuclei of the trapezoid body nTPM: 100.3
1983
Male, age 76, both hemispheres
136.0
2368
Female, age 91, both hemispheres
111.2
2166
Male, age 80, both hemispheres
86.9
2735
Female, age 85, both hemispheres
85.7
2159
Male, age 61, both hemispheres
81.7
Nucleus raphe magnus nTPM: 90.8
2051
Male, age 76, both hemispheres
111.8
2455
Male, age 74, both hemispheres
106.5
2160
Male, age 61, both hemispheres
97.0
2328
Male, age 80, both hemispheres
90.1
2459
Female, age 91, both hemispheres
79.5
2172
Female, age 85, both hemispheres
60.0
Paramedian reticular nucleus nTPM: 133.2
2052
Male, age 76, both hemispheres
196.5
2057
Male, age 80, both hemispheres
122.3
2313
Male, age 61, both hemispheres
111.4
2050
Female, age 85, both hemispheres
102.5
Pedunculopontine tegmental nucleus nTPM: 132.8
2334
Male, age 80, both hemispheres
155.4
1921
Female, age 85, both hemispheres
131.9
2338
Male, age 61, both hemispheres
111.0
Pontine nuclei nTPM: 80.6
1968
Male, age 76, left hemisphere
104.0
2727
Male, age 61, right hemisphere
91.2
2115
Male, age 80, left hemisphere
84.6
2787
Female, age 85, both hemispheres
84.4
2319
Female, age 91, both hemispheres
73.6
2454
Male, age 74, left hemisphere
72.6
1863
Male, age 55, unknown
71.0
2109
Female, age 72, unknown
63.7
Pontine raphe nucleus nTPM: 128.4
2853
Male, age 76, midline
151.2
2122
Female, age 85, midline
105.6
Posteroventral cochlear nucleus nTPM: 120.9
2752
Female, age 85, both hemispheres
171.8
2371
Male, age 61, both hemispheres
162.7
2070
Male, age 76, both hemispheres
131.5
2135
Female, age 91, both hemispheres
69.8
2341
Male, age 80, both hemispheres
68.7
Principal sensory trigeminal nucleus nTPM: 111.2
2324
Male, age 76, both hemispheres
186.4
2008
Male, age 80, left hemisphere
99.0
2158
Male, age 61, both hemispheres
90.3
2367
Female, age 91, left hemisphere
69.3
Reticular pontine nucleus, caudal nTPM: 104.4
2092
Male, age 76, both hemispheres
128.3
2332
Male, age 80, right hemisphere
114.7
2457
Female, age 91, both hemispheres
91.2
2559
Male, age 74, both hemispheres
83.4
Reticular pontine nucleus, oral nTPM: 113.6
1939
Male, age 80, both hemispheres
177.4
2167
Male, age 76, both hemispheres
168.5
2012
Female, age 85, both hemispheres
102.4
2366
Female, age 91, both hemispheres
82.7
2361
Male, age 74, both hemispheres
37.2
Reticulotegmental nucleus nTPM: 135.0
2333
Male, age 80, both hemispheres
171.4
2325
Male, age 76, both hemispheres
134.3
2322
Female, age 91, both hemispheres
122.8
2452
Male, age 74, both hemispheres
111.5
Spinal trigeminal nucleus, oral nTPM: 140.1
1978
Male, age 76, both hemispheres
154.3
2737
Female, age 85, both hemispheres
146.7
2164
Male, age 80, both hemispheres
119.2
Subcoeruleus area nTPM: 132.0
2323
Female, age 91, left hemisphere
170.7
1958
Male, age 80, both hemispheres
152.1
2451
Male, age 74, both hemispheres
138.4
2369
Female, age 85, left hemisphere
104.9
2089
Male, age 76, left hemisphere
93.8
Superior olive nTPM: 95.0
2364
Male, age 74, right hemisphere
116.9
2020
Male, age 76, both hemispheres
106.5
2561
Female, age 91, both hemispheres
89.7
2329
Male, age 80, right hemisphere
87.3
1875
Female, age 85, both hemispheres
74.7
Ventral periolivary nuclei nTPM: 91.8
2023
Male, age 76, both hemispheres
109.1
2165
Male, age 80, both hemispheres
98.8
2130
Female, age 85, both hemispheres
79.8
2794
Female, age 91, left hemisphere
79.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 103.4
2359
Male, age 61, both hemispheres
119.7
1959
Male, age 76, both hemispheres
106.9
2456
Female, age 91, both hemispheres
105.9
2840
Female, age 85, both hemispheres
105.4
2161
Male, age 80, both hemispheres
94.9
2449
Male, age 74, both hemispheres
87.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
