PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		43.834
Mouse brain, Intensity
Ponsi 		65.561
RNA expressioni
HPA Brain:561.0 nTPM
FANTOM5:891.6 Scaled Tags Per Million
Pig:414.8 nTPM
Mouse:364.5 nTPM
Allen mouse:13.9 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA026918
Medulla oblongata mean intensity 43.834
intensityi
FRONT BACK
Nucleus of the solitary tract 37.104
Raphe magnus nucleus 22.792
Cochlear nucleus 14.368
Lateral paragigantocellular nucleus 11.370
Raphe pallidus nucleus 6.578
Facial nucleus 21.004
Hypoglossal nucleus 10.942
Ambiguus nucleus 40.886
External cuneate nucleus 27.133
Inferior olivary nucleus 35.090
Raphe obscures nucleus 31.884
Dorsal motor nucleus of vagus 43.834
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 23.384
Parabrachial nucleus 24.095
Principle sensory trigeminal nucleus 13.604
Locus coeruleus 65.561
Pontine nucleus 9.042
Vestibular nucleus 19.972
Pontine reticular nucleus, oral 5.344
Lateral lemniscus 12.349
Superior paraolivary nucleus 18.102

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 561.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 252.7
2301 Female, age 85, both hemispheres 278.2
2188 Female, age 91, both hemispheres 266.1
1984 Male, age 76, both hemispheres 255.7
2090 Male, age 80, both hemispheres 210.8
Area postrema
nTPM: 165.9
2054 Male, age 76, both hemispheres 252.1
2799 Male, age 61, both hemispheres 141.1
2306 Male, age 80, both hemispheres 104.5
Dorsal cochlear nucleus
nTPM: 260.8
2187 Female, age 91, both hemispheres 292.8
2058 Male, age 76, both hemispheres 284.2
2802 Male, age 74, right hemisphere 272.5
2370 Male, age 61, both hemispheres 257.8
2378 Male, age 80, both hemispheres 196.9
Dorsal medullary reticular nucleus
nTPM: 362.3
2040 Female, age 85, both hemispheres 574.8
2373 Male, age 61, both hemispheres 263.0
2088 Male, age 76, both hemispheres 249.1
Dorsal motor vagal complex
nTPM: 284.8
2133 Female, age 91, both hemispheres 512.4
2000 Male, age 74, unknown 432.7
2844 Male, age 55, unknown 318.1
2813 Female, age 72, unknown 282.5
2643 Male, age 74, both hemispheres 195.2
2797 Male, age 61, both hemispheres 187.4
2185 Male, age 76, both hemispheres 175.8
2807 Female, age 85, both hemispheres 174.6
Dorsal tegmental nucleus
nTPM: 280.9
2083 Male, age 80, both hemispheres 328.9
1936 Male, age 76, left hemisphere 279.0
2326 Male, age 74, both hemispheres 259.3
2358 Male, age 61, both hemispheres 256.2
Dorsolateral tegmental area
nTPM: 265.1
2654 Male, age 80, both hemispheres 345.5
2751 Female, age 85, both hemispheres 290.6
2141 Male, age 76, both hemispheres 282.2
2360 Male, age 74, both hemispheres 239.1
2337 Male, age 61, both hemispheres 167.9
Gigantocellular reticular nuclei, medullary
nTPM: 348.6
2462 Male, age 74, both hemispheres 548.6
1876 Female, age 85, both hemispheres 389.0
2022 Male, age 76, right hemisphere 345.0
2310 Male, age 80, both hemispheres 335.9
2387 Female, age 91, both hemispheres 262.4
2314 Male, age 61, both hemispheres 210.7
Gigantocellular reticular nuclei, pars
nTPM: 385.6
2168 Male, age 76, both hemispheres 571.4
2084 Female, age 85, both hemispheres 436.9
2336 Male, age 61, both hemispheres 351.8
2706 Male, age 80, both hemispheres 286.4
2330 Male, age 80, both hemispheres 281.7
Inferior olive
nTPM: 185.4
2085 Female, age 85, both hemispheres 226.4
2563 Male, age 74, both hemispheres 206.9
2628 Female, age 91, both hemispheres 193.5
2178 Male, age 61, both hemispheres 168.4
2379 Male, age 80, both hemispheres 132.1
Kolliker-Fuse nucleus
nTPM: 352.6
2163 Male, age 80, both hemispheres 516.5
2793 Female, age 91, left hemisphere 320.7
2315 Male, age 76, right hemisphere 220.5
Lateral lemniscal nuclei
nTPM: 478.6
2169 Male, age 76, both hemispheres 591.2
2036 Male, age 80, both hemispheres 529.4
2453 Male, age 74, right hemisphere 510.7
2746 Female, age 85, left hemisphere 463.7
2320 Female, age 91, left hemisphere 298.2
Lateral medullary reticular nucleus
nTPM: 272.6
2044 Male, age 76, both hemispheres 476.5
2305 Male, age 74, both hemispheres 263.9
2804 Female, age 91, both hemispheres 254.6
2190 Female, age 85, both hemispheres 245.5
2374 Male, age 61, both hemispheres 214.4
2852 Male, age 80, both hemispheres 180.6
Lateral parabrachial nucleus
nTPM: 344.6
2139 Female, age 85, right hemisphere 524.0
2790 Male, age 61, both hemispheres 340.5
2013 Male, age 80, both hemispheres 332.5
2792 Male, age 76, both hemispheres 181.3
Lateral vestibular nucleus
nTPM: 358.3
2184 Male, age 76, both hemispheres 459.0
2311 Male, age 80, both hemispheres 257.6
Locus coeruleus
nTPM: 495.7
2720 Male, age 74, both hemispheres 629.8
2123 Female, age 91, both hemispheres 613.0
2014 Male, age 55, unknown 545.6
2317 Female, age 72, unknown 435.9
2788 Male, age 74, unknown 431.9
1980 Male, age 76, both hemispheres 413.6
2162 Male, age 80, both hemispheres 399.8
Medial olivary nucleus
nTPM: 161.9
2851 Male, age 80, both hemispheres 196.1
1962 Male, age 76, both hemispheres 164.8
2138 Female, age 91, both hemispheres 147.4
1943 Male, age 61, both hemispheres 139.2
Medial parabrachial nucleus
nTPM: 315.0
2854 Male, age 80, both hemispheres 381.0
2156 Male, age 61, both hemispheres 355.3
2170 Female, age 91, both hemispheres 312.1
2786 Male, age 76, both hemispheres 287.5
2463 Female, age 85, right hemisphere 239.0
Medial periolivary nuclei
nTPM: 451.7
2171 Female, age 85, both hemispheres 701.4
2063 Male, age 76, both hemispheres 613.1
2791 Male, age 74, right hemisphere 416.9
2081 Male, age 80, both hemispheres 281.1
2458 Female, age 91, both hemispheres 246.0
Medial vestibular nucleus
nTPM: 421.5
2134 Male, age 76, both hemispheres 488.6
2803 Female, age 91, both hemispheres 430.2
2093 Male, age 80, both hemispheres 429.7
2801 Male, age 74, both hemispheres 406.6
2743 Female, age 85, both hemispheres 396.1
2624 Male, age 61, both hemispheres 377.7
Motor facial nucleus
nTPM: 439.1
2062 Male, age 76, both hemispheres 641.4
2365 Male, age 74, right hemisphere 496.2
2327 Male, age 80, both hemispheres 452.5
2697 Female, age 85, both hemispheres 431.6
2126 Male, age 61, both hemispheres 335.6
2795 Female, age 91, both hemispheres 277.6
Motor hypoglossal nucleus
nTPM: 373.5
2132 Female, age 85, both hemispheres 460.8
2125 Female, age 91, both hemispheres 460.3
2461 Male, age 61, both hemispheres 428.7
2182 Male, age 80, both hemispheres 270.8
2277 Male, age 76, both hemispheres 246.8
Motor trigeminal nucleus
nTPM: 339.4
2079 Male, age 80, both hemispheres 455.5
2560 Male, age 74, both hemispheres 363.4
2309 Male, age 76, both hemispheres 320.0
2335 Male, age 61, both hemispheres 306.0
2321 Female, age 91, both hemispheres 252.1
Nuclei of the trapezoid body
nTPM: 522.5
2159 Male, age 61, both hemispheres 722.5
2735 Female, age 85, both hemispheres 678.0
1983 Male, age 76, both hemispheres 549.9
2166 Male, age 80, both hemispheres 389.5
2368 Female, age 91, both hemispheres 272.4
Nucleus ambiguus
nTPM: 311.2
2096 Female, age 85, both hemispheres 450.3
2071 Male, age 76, both hemispheres 172.0
Nucleus cuneatus
nTPM: 231.5
2131 Male, age 76, both hemispheres 366.9
2100 Male, age 76, both hemispheres 284.9
2376 Male, age 61, both hemispheres 275.4
2564 Male, age 74, both hemispheres 265.9
2562 Male, age 61, both hemispheres 264.6
2381 Male, age 80, both hemispheres 201.8
2805 Female, age 91, both hemispheres 160.8
2808 Female, age 85, both hemispheres 138.2
2380 Male, age 80, both hemispheres 124.6
Nucleus gracilis
nTPM: 148.8
2627 Male, age 74, both hemispheres 217.0
2382 Male, age 80, both hemispheres 126.7
2299 Female, age 85, both hemispheres 102.8
Nucleus raphe magnus
nTPM: 561.0
2160 Male, age 61, both hemispheres 872.4
2172 Female, age 85, both hemispheres 719.0
2455 Male, age 74, both hemispheres 630.0
2328 Male, age 80, both hemispheres 427.3
2051 Male, age 76, both hemispheres 414.3
2459 Female, age 91, both hemispheres 302.8
Nucleus raphe obscurus
nTPM: 217.3
2800 Male, age 61, midline 296.5
2845 Female, age 85, midline 249.8
2142 Male, age 76, midline 105.7
Nucleus raphe pallidus
nTPM: 262.8
2183 Male, age 80, midline 376.6
1924 Male, age 61, midline 290.8
2145 Male, age 76, midline 121.1
Nucleus tractus solitarii
nTPM: 295.2
2144 Female, age 91, right hemisphere 439.6
2656 Male, age 76, both hemispheres 283.3
2191 Female, age 85, both hemispheres 252.8
2307 Male, age 80, both hemispheres 205.0
Paramedian reticular nucleus
nTPM: 454.8
2050 Female, age 85, both hemispheres 588.3
2313 Male, age 61, both hemispheres 467.0
2057 Male, age 80, both hemispheres 461.9
2052 Male, age 76, both hemispheres 302.3
Parvicellular reticular nuclei
nTPM: 394.9
2558 Male, age 74, both hemispheres 446.1
2119 Male, age 80, both hemispheres 378.7
2095 Male, age 76, both hemispheres 359.9
Parvicellular reticular nuclei, medullary
nTPM: 419.0
2189 Female, age 91, both hemispheres 479.1
2091 Female, age 85, both hemispheres 432.0
2181 Male, age 80, left hemisphere 345.7
Pedunculopontine tegmental nucleus
nTPM: 324.3
1921 Female, age 85, both hemispheres 356.5
2334 Male, age 80, both hemispheres 337.5
2338 Male, age 61, both hemispheres 278.9
Peritrigeminal nucleus
nTPM: 365.5
2179 Male, age 61, both hemispheres 410.9
2136 Male, age 76, both hemispheres 362.1
2067 Female, age 85, both hemispheres 323.5
Pontine nuclei
nTPM: 538.9
2727 Male, age 61, right hemisphere 801.1
1863 Male, age 55, unknown 704.5
2787 Female, age 85, both hemispheres 681.7
2109 Female, age 72, unknown 586.2
1968 Male, age 76, left hemisphere 517.8
2454 Male, age 74, left hemisphere 431.4
2115 Male, age 80, left hemisphere 309.2
2319 Female, age 91, both hemispheres 279.2
Pontine raphe nucleus
nTPM: 456.3
2122 Female, age 85, midline 569.0
2853 Male, age 76, midline 343.7
Posteroventral cochlear nucleus
nTPM: 268.7
2752 Female, age 85, both hemispheres 456.8
2070 Male, age 76, both hemispheres 334.1
2371 Male, age 61, both hemispheres 233.5
2341 Male, age 80, both hemispheres 171.5
2135 Female, age 91, both hemispheres 147.5
Prepositus hypoglossal nucleus
nTPM: 334.4
2855 Female, age 85, right hemisphere 396.6
2086 Male, age 80, both hemispheres 272.3
Principal sensory trigeminal nucleus
nTPM: 484.6
2158 Male, age 61, both hemispheres 706.6
2008 Male, age 80, left hemisphere 552.5
2324 Male, age 76, both hemispheres 393.3
2367 Female, age 91, left hemisphere 285.8
Reticular pontine nucleus, caudal
nTPM: 366.8
2332 Male, age 80, right hemisphere 472.2
2092 Male, age 76, both hemispheres 420.0
2559 Male, age 74, both hemispheres 318.1
2457 Female, age 91, both hemispheres 257.0
Reticular pontine nucleus, oral
nTPM: 377.0
2012 Female, age 85, both hemispheres 504.9
2361 Male, age 74, both hemispheres 502.7
1939 Male, age 80, both hemispheres 325.7
2167 Male, age 76, both hemispheres 289.0
2366 Female, age 91, both hemispheres 262.5
Reticulotegmental nucleus
nTPM: 363.7
2325 Male, age 76, both hemispheres 462.9
2452 Male, age 74, both hemispheres 359.5
2333 Male, age 80, both hemispheres 326.4
2322 Female, age 91, both hemispheres 306.1
Spinal trigeminal nucleus, caudal
nTPM: 366.9
2390 Female, age 91, both hemispheres 696.4
2447 Male, age 76, both hemispheres 373.3
2642 Male, age 74, both hemispheres 271.8
2312 Male, age 61, both hemispheres 248.6
2308 Male, age 80, both hemispheres 244.6
Spinal trigeminal nucleus, interpolar
nTPM: 519.2
2625 Male, age 61, both hemispheres 751.7
2066 Male, age 76, right hemisphere 613.8
2389 Female, age 91, both hemispheres 436.9
2033 Male, age 80, both hemispheres 405.4
2386 Female, age 85, both hemispheres 388.4
Spinal trigeminal nucleus, oral
nTPM: 382.9
2737 Female, age 85, both hemispheres 427.5
2164 Male, age 80, both hemispheres 424.5
1978 Male, age 76, both hemispheres 296.6
Spinal vestibular nucleus
nTPM: 362.8
2186 Female, age 91, both hemispheres 456.8
2780 Male, age 80, both hemispheres 394.3
2806 Female, age 85, both hemispheres 374.1
2796 Male, age 61, both hemispheres 343.5
2748 Male, age 76, both hemispheres 321.5
2384 Male, age 74, both hemispheres 286.5
Subcoeruleus area
nTPM: 363.5
1958 Male, age 80, both hemispheres 449.2
2089 Male, age 76, left hemisphere 425.8
2323 Female, age 91, left hemisphere 420.8
2451 Male, age 74, both hemispheres 279.0
2369 Female, age 85, left hemisphere 242.5
Superior olive
nTPM: 443.9
1875 Female, age 85, both hemispheres 662.0
2364 Male, age 74, right hemisphere 439.3
2020 Male, age 76, both hemispheres 427.1
2329 Male, age 80, right hemisphere 377.2
2561 Female, age 91, both hemispheres 314.1
Superior vestibular nucleus
nTPM: 280.7
2015 Male, age 80, both hemispheres 343.6
2061 Male, age 76, both hemispheres 262.8
2383 Male, age 74, both hemispheres 235.8
Ventral medullary reticular nucleus
nTPM: 279.0
2060 Male, age 76, both hemispheres 327.5
2372 Male, age 61, both hemispheres 230.6
Ventral periolivary nuclei
nTPM: 474.8
2130 Female, age 85, both hemispheres 601.5
2165 Male, age 80, both hemispheres 524.6
2023 Male, age 76, both hemispheres 408.7
2794 Female, age 91, left hemisphere 364.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 318.1
2741 Female, age 85, both hemispheres 423.7
1986 Male, age 76, both hemispheres 392.7
2180 Male, age 61, both hemispheres 305.7
2302 Female, age 91, both hemispheres 268.4
2118 Male, age 80, both hemispheres 200.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 379.8
2449 Male, age 74, both hemispheres 547.5
2840 Female, age 85, both hemispheres 431.0
1959 Male, age 76, both hemispheres 422.0
2161 Male, age 80, both hemispheres 368.2
2359 Male, age 61, both hemispheres 303.2
2456 Female, age 91, both hemispheres 206.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 891.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 429.1
FF:10182-103D2 60 years, female 588.4
FF:10165-103B3 76 years, female 269.9
Medulla oblongata
Scaled Tags Per Million: 249.8
FF:10038-101F2 18-64 years, mixed 398.3
FF:10155-103A2 76 years, female 180.8
FF:10174-103C3 60 years, female 170.2
Pons
Scaled Tags Per Million: 891.6
FF:10033-101E6 18-54 years, mixed 891.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 414.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 277.4
Samples: 4

Max nTPM: 323.6
Min nTPM: 175.1
Sample A Female 323.6
Sample B Female 306.4
Sample C Male 304.5
Sample D Male 175.1
Pons
nTPM: 414.8
Samples: 4

Max nTPM: 529.2
Min nTPM: 302.1
Sample A Female 529.2
Sample B Female 302.1
Sample C Male 388.1
Sample D Male 439.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 364.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 364.6
Samples: 4

Max nTPM: 375.9
Min nTPM: 346.9
Sample A Male 375.9
Sample B Male 367.1
Sample C Female 368.3
Sample D Female 346.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.8
68443009 Antisense, RP_050111_01_B11, Mouse strain C57BL/6J (56 days, male) 15.8
1124 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 11.8
1125 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 9.2
Pons
Expression energy: 13.9
68443009 Antisense, RP_050111_01_B11, Mouse strain C57BL/6J (56 days, male) 15.4
1124 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 12.4
1125 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 8.1

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