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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:550.3 nTPM
HPA Brain:469.8 nTPM
GTEx:550.3 nTPM
FANTOM5:501.0 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:683.3 nTPM
Allen mouse:12.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036048Antibody CAB002427
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

469.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 455.2
2481 Female, age 94, left hemisphere 606.4
2288 Male, age 75, left hemisphere 507.1
2290 Female, age 72, unknown 500.1
1781 Male, age 74, unknown 459.1
2846 Female, age 79, unknown 421.0
1857 Female, age 85, left hemisphere 401.1
1854 Male, age 80, left hemisphere 385.4
2289 Male, age 61, right hemisphere 361.2
Globus pallidus, externus
nTPM: 469.8
2646 Male, age 61, right hemisphere 558.7
2772 Female, age 79, unknown 527.5
1996 Male, age 80, right hemisphere 526.5
2567 Female, age 72, unknown 395.9
2395 Male, age 75, both hemispheres 340.5
Globus pallidus, internus
nTPM: 454.0
2483 Female, age 94, right hemisphere 727.7
2287 Male, age 75, right hemisphere 569.6
1818 Male, age 74, unknown 453.0
2037 Male, age 80, right hemisphere 419.1
2778 Female, age 91, both hemispheres 390.0
2566 Female, age 72, unknown 310.6
2111 Female, age 85, right hemisphere 307.7
Nucleus accumbens
nTPM: 386.3
2286 Male, age 75, left hemisphere 520.9
1783 Male, age 74, unknown 451.4
1806 Female, age 85, left hemisphere 405.3
2391 Female, age 94, left hemisphere 366.2
1856 Female, age 91, right hemisphere 365.9
2824 Male, age 61, right hemisphere 354.7
2698 Female, age 72, unknown 335.7
2732 Male, age 80, right hemisphere 290.2
Nucleus basalis of Meynert
nTPM: 432.0
2569 Male, age 61, both hemispheres 557.7
2484 Female, age 94, left hemisphere 542.6
2393 Male, age 80, right hemisphere 319.7
2821 Male, age 75, both hemispheres 308.0
Nucleus of the diagonal band
nTPM: 377.9
2775 Male, age 80, right hemisphere 408.8
2029 Male, age 61, right hemisphere 394.6
2195 Female, age 85, both hemispheres 378.2
1812 Female, age 91, both hemispheres 363.7
1979 Male, age 74, unknown 344.3
Putamen
nTPM: 424.9
2482 Female, age 94, left hemisphere 555.3
2466 Female, age 79, unknown 465.1
2489 Female, age 72, unknown 441.4
1829 Male, age 74, unknown 382.8
1838 Male, age 80, right hemisphere 377.4
2647 Male, age 75, left hemisphere 377.1
1937 Female, age 91, right hemisphere 374.9
Septal nuclei
nTPM: 365.0
1960 Male, age 74, unknown 469.5
2031 Female, age 72, unknown 421.9
2059 Female, age 85, both hemispheres 391.3
2009 Female, age 91, both hemispheres 342.0
2629 Female, age 94, right hemisphere 319.6
2199 Male, age 80, right hemisphere 314.9
2394 Male, age 61, left hemisphere 295.8
Stria terminalis, bed nucleus
nTPM: 357.9
1974 Female, age 91, both hemispheres 406.5
2486 Female, age 94, both hemispheres 353.9
2201 Male, age 74, unknown 313.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

550.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 491.1
Samples: 246

Max nTPM: 1900.2
Min nTPM: 174.8
Std nTPM: 181.2
Median nTPM: 454.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1900.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1351.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1053.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1037.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 920.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 912.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 897.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 889.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 884.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 882.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 850.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 840.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 833.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 820.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 795.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 780.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 770.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 770.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 768.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 697.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 697.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 682.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 680.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 680.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 674.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 673.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 673.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 662.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 655.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 654.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 647.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 646.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 642.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 640.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 639.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 638.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 638.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 633.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 618.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 616.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 612.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 610.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 607.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 598.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 594.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 590.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 588.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 587.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 585.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 584.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 582.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 582.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 579.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 576.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 576.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 569.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 563.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 557.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 553.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 553.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 550.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 549.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 548.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 547.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 542.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 541.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 541.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 536.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 535.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 531.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 530.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 529.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 523.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 520.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 520.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 519.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 519.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 517.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 515.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 515.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 515.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 513.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 512.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 511.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 510.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 510.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 507.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 506.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 505.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 504.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 501.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 499.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 496.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 491.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 487.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 484.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 481.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 480.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 479.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 479.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 478.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 477.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 472.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 472.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 470.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 470.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 469.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 468.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 468.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 468.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 467.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 467.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 466.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 465.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 464.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 463.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 460.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 460.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 460.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 458.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 456.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 455.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 454.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 453.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 453.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 453.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 452.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 449.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 449.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 448.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 447.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 444.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 443.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 441.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 438.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 437.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 437.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 436.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 434.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 434.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 434.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 431.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 431.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 430.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 429.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 428.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 427.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 427.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 425.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 422.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 419.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 419.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 418.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 417.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 416.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 414.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 412.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 408.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 408.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 408.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 406.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 406.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 406.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 406.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 404.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 404.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 399.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 399.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 397.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 397.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 396.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 396.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 396.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 395.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 393.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 390.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 390.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 389.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 387.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 386.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 384.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 383.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 383.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 383.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 382.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 382.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 381.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 380.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 377.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 374.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 373.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 373.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 371.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 368.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 368.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 366.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 366.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 365.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 365.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 365.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 361.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 361.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 360.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 358.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 354.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 353.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 351.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 351.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 349.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 349.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 348.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 347.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 347.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 346.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 345.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 345.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 343.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 341.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 341.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 332.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 332.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 331.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 328.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 326.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 325.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 318.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 316.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 315.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 315.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 312.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 312.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 309.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 307.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 306.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 305.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 304.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 303.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 280.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 279.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 268.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 265.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 254.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 208.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 203.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 174.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 428.6
Samples: 246

Max nTPM: 1566.0
Min nTPM: 166.1
Std nTPM: 187.6
Median nTPM: 379.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1566.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1433.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1431.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1017.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 947.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 930.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 877.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 875.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 849.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 810.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 797.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 771.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 756.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 733.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 712.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 708.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 702.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 701.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 701.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 697.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 684.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 660.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 657.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 647.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 645.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 645.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 641.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 640.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 634.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 632.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 627.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 589.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 582.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 582.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 582.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 581.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 580.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 573.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 562.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 543.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 540.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 533.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 532.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 532.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 529.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 527.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 521.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 520.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 511.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 509.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 508.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 505.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 500.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 495.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 493.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 491.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 491.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 489.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 485.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 480.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 469.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 469.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 467.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 466.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 466.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 464.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 462.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 461.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 458.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 457.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 457.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 455.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 454.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 453.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 453.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 451.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 451.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 446.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 446.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 445.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 443.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 437.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 437.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 435.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 434.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 433.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 424.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 423.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 423.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 423.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 421.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 420.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 419.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 419.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 418.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 418.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 417.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 416.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 416.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 414.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 414.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 409.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 409.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 408.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 401.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 399.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 398.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 398.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 396.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 395.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 395.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 394.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 393.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 393.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 391.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 391.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 390.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 389.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 388.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 387.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 386.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 383.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 380.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 379.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 378.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 376.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 375.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 374.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 374.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 372.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 371.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 370.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 370.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 369.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 366.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 363.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 363.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 362.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 362.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 361.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 360.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 358.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 357.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 357.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 354.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 353.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 353.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 349.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 347.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 346.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 346.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 344.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 344.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 343.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 343.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 342.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 342.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 342.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 342.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 340.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 340.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 338.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 337.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 334.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 333.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 331.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 328.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 327.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 327.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 324.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 323.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 323.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 323.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 322.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 322.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 320.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 320.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 318.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 316.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 316.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 316.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 315.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 314.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 313.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 313.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 312.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 312.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 311.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 311.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 309.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 309.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 307.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 306.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 304.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 303.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 302.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 300.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 299.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 298.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 298.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 297.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 296.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 296.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 295.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 295.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 295.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 295.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 293.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 291.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 289.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 286.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 284.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 282.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 279.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 278.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 277.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 276.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 276.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 275.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 275.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 274.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 273.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 271.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 271.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 271.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 265.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 265.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 264.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 263.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 261.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 259.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 259.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 258.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 256.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 254.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 248.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 244.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 241.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 240.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 239.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 238.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 232.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 230.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 225.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 196.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 166.1
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Brain - Putamen (basal ganglia)
Average nTPM: 550.3
Samples: 205

Max nTPM: 1729.1
Min nTPM: 225.7
Std nTPM: 204.5
Median nTPM: 503.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1729.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1680.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1109.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1099.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1014.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1000.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 991.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 980.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 941.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 932.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 929.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 925.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 915.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 905.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 900.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 897.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 890.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 866.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 861.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 839.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 830.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 818.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 792.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 789.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 767.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 766.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 741.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 725.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 709.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 709.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 708.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 704.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 682.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 670.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 669.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 669.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 665.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 660.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 655.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 652.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 648.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 645.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 642.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 640.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 636.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 628.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 627.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 624.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 624.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 622.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 622.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 612.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 612.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 609.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 599.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 597.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 596.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 592.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 591.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 588.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 587.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 586.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 584.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 581.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 580.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 580.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 579.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 578.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 565.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 564.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 563.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 560.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 551.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 549.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 547.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 540.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 539.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 536.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 536.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 536.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 533.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 532.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 530.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 529.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 528.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 526.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 525.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 524.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 522.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 520.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 518.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 518.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 517.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 516.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 515.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 514.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 514.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 507.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 506.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 503.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 503.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 503.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 503.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 501.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 499.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 499.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 499.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 499.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 498.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 496.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 493.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 491.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 490.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 490.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 490.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 489.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 486.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 486.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 484.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 483.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 478.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 478.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 478.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 477.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 475.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 474.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 471.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 468.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 468.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 466.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 466.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 463.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 463.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 463.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 463.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 462.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 460.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 453.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 453.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 452.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 450.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 448.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 448.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 448.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 447.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 443.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 442.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 442.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 442.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 437.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 436.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 436.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 431.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 428.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 427.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 424.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 423.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 419.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 419.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 418.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 414.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 414.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 413.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 413.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 409.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 408.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 403.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 402.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 401.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 398.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 392.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 390.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 389.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 387.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 386.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 386.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 385.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 368.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 367.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 362.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 361.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 356.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 356.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 353.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 353.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 346.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 346.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 346.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 343.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 341.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 341.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 336.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 335.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 335.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 334.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 334.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 333.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 333.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 327.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 316.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 304.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 270.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 259.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 245.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 225.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

501.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 369.0
FF:10164-103B2 76 years, female 369.0
Nucleus accumbens
Scaled Tags Per Million: 501.0
FF:10037-101F1 23-56 years, mixed 501.0
Putamen
Scaled Tags Per Million: 372.7
FF:10176-103C5 60 years, female 372.7
Globus pallidus
Scaled Tags Per Million: 291.6
FF:10161-103A8 76 years, female 294.4
FF:10175-103C4 60 years, female 288.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.6
Pig sample Sample description nTPM
Caudate
nTPM: 34.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 28.5
Sample A Female 28.5
Sample B Female 35.8
Sample C Male 42.4
Sample D Male 31.1
Putamen
nTPM: 40.6
Samples: 4

Max nTPM: 48.9
Min nTPM: 32.3
Sample A Female 37.9
Sample B Female 32.3
Sample C Male 48.9
Sample D Male 43.3
Septum
nTPM: 34.6
Samples: 4

Max nTPM: 38.0
Min nTPM: 32.2
Sample A Female 32.7
Sample B Female 32.2
Sample C Male 38.0
Sample D Male 35.3
Ventral pallidum
nTPM: 34.3
Samples: 4

Max nTPM: 43.5
Min nTPM: 27.9
Sample A Female 27.9
Sample B Female 36.1
Sample C Male 43.5
Sample D Male 29.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

683.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 604.4
Samples: 4

Max nTPM: 633.5
Min nTPM: 553.3
Sample A Male 615.6
Sample B Male 615.3
Sample C Female 553.3
Sample D Female 633.5
Septum
nTPM: 683.3
Samples: 4

Max nTPM: 778.5
Min nTPM: 592.9
Sample A Male 639.9
Sample B Male 721.7
Sample C Female 778.5
Sample D Female 592.9
Ventral forebrain
nTPM: 649.8
Samples: 4

Max nTPM: 777.2
Min nTPM: 588.0
Sample A Male 588.0
Sample B Male 621.3
Sample C Female 777.2
Sample D Female 612.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.7
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 11.7
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 10.2
Pallidum
Expression energy: 12.8
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 12.8
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 12.2

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