HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:433.5 nTPM
HPA Brain:501.0 nTPM
GTEx:433.5 nTPM
FANTOM5:336.6 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:595.1 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036048Antibody CAB002427
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 501.0
Sample id Sample description nTPM
Hippocampus
nTPM: 443.1
1898 Male, age 80, left hemisphere 480.7
2529 Female, age 94, left hemisphere 448.2
1911 Female, age 85, right hemisphere 443.7
2621 Female, age 67, right hemisphere 438.5
2148 Female, age 91, left hemisphere 424.1
1855 Male, age 76, left hemisphere 423.3
Dentate gyrus
nTPM: 437.6
2530 Female, age 94, left hemisphere 552.6
2010 Male, age 76, both hemispheres 501.2
1927 Female, age 91, both hemispheres 414.5
2531 Female, age 67, both hemispheres 405.8
2246 Female, age 85, both hemispheres 387.4
2528 Male, age 74, both hemispheres 364.1
Entorhinal gyrus
nTPM: 389.7
2764 Male, age 80, right hemisphere 442.1
1787 Male, age 76, left hemisphere 424.4
2117 Female, age 91, right hemisphere 404.5
2613 Female, age 94, left hemisphere 385.0
1938 Female, age 85, left hemisphere 371.9
2686 Male, age 75, right hemisphere 310.1
Hippocampus, CA1
nTPM: 501.0
2749 Male, age 80, left hemisphere 738.0
2527 Male, age 74, both hemispheres 489.2
2045 Male, age 76, both hemispheres 451.4
2082 Female, age 91, right hemisphere 427.2
1873 Female, age 85, both hemispheres 399.1
Hippocampus, CA2
nTPM: 458.3
1963 Male, age 80, left hemisphere 612.1
2249 Male, age 74, both hemispheres 472.3
2113 Female, age 91, right hemisphere 438.2
2437 Female, age 94, left hemisphere 437.5
1892 Male, age 76, both hemispheres 431.0
1940 Female, age 85, left hemisphere 358.7
Hippocampus, CA3
nTPM: 494.3
2436 Male, age 74, both hemispheres 618.0
2137 Male, age 80, left hemisphere 577.5
2861 Female, age 67, both hemispheres 516.6
1867 Male, age 76, both hemispheres 446.0
2620 Female, age 94, left hemisphere 445.8
1891 Female, age 85, both hemispheres 361.7
Parahippocampal cortex
nTPM: 405.7
2018 Male, age 76, both hemispheres 539.8
2245 Female, age 91, both hemispheres 446.4
2532 Female, age 72, left hemisphere 436.0
2622 Female, age 67, right hemisphere 417.8
1850 Male, age 80, both hemispheres 400.4
1990 Female, age 91, right hemisphere 396.8
1933 Female, age 85, both hemispheres 376.2
2250 Female, age 67, right hemisphere 365.3
2692 Male, age 74, both hemispheres 364.8
2693 Female, age 94, both hemispheres 313.7
Perirhinal gyrus
nTPM: 428.8
1794 Male, age 80, right hemisphere 519.1
1847 Female, age 91, left hemisphere 437.6
1841 Female, age 85, right hemisphere 436.0
2521 Female, age 94, right hemisphere 424.8
2848 Male, age 76, right hemisphere 326.6
Subiculum
nTPM: 397.3
1901 Male, age 80, both hemispheres 421.0
1977 Female, age 85, both hemispheres 408.7
2438 Female, age 94, left hemisphere 405.5
2619 Male, age 74, both hemispheres 403.5
2729 Female, age 91, right hemisphere 383.7
2042 Male, age 76, both hemispheres 361.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 433.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 433.5
Samples: 197

Max nTPM: 954.5
Min nTPM: 206.7
Std nTPM: 131.9
Median nTPM: 411.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 954.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 942.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 806.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 799.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 760.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 732.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 694.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 664.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 657.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 648.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 634.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 336.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 336.6
FF:10169-103B7 60 years, female 346.8
FF:10153-102I9 76 years, female 326.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 42.2
Pig sample Sample description nTPM
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 43.6
Min nTPM: 30.2
Sample A Female 43.6
Sample B Female 30.2
Sample C Male 32.8
Sample D Male 30.4
Dorsal hippocampus
nTPM: 42.2
Samples: 4

Max nTPM: 52.3
Min nTPM: 36.0
Sample A Female 52.3
Sample B Female 41.9
Sample C Male 38.5
Sample D Male 36.0
Entorhinal cortex
nTPM: 37.4
Samples: 4

Max nTPM: 41.5
Min nTPM: 31.4
Sample A Female 41.5
Sample B Female 37.9
Sample C Male 38.8
Sample D Male 31.4
Ventral hippocampus
nTPM: 39.9
Samples: 4

Max nTPM: 49.4
Min nTPM: 27.2
Sample A Female 42.3
Sample B Female 27.2
Sample C Male 49.4
Sample D Male 40.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 595.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 553.2
Samples: 4

Max nTPM: 594.6
Min nTPM: 521.7
Sample A Male 521.7
Sample B Male 548.1
Sample C Female 548.4
Sample D Female 594.6
Hippocampal formation
nTPM: 595.2
Samples: 4

Max nTPM: 691.9
Min nTPM: 552.1
Sample A Male 552.1
Sample B Male 562.7
Sample C Female 574.0
Sample D Female 691.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 15.1
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 13.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org