PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:444.9 nTPM
FANTOM5:481.5 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:641.6 nTPM
Allen mouse:13.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 444.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 319.2
2090 Male, age 80, both hemispheres 334.0
2301 Female, age 85, both hemispheres 326.9
1984 Male, age 76, both hemispheres 317.4
2188 Female, age 91, both hemispheres 298.6
Area postrema
nTPM: 300.4
2799 Male, age 61, both hemispheres 351.6
2306 Male, age 80, both hemispheres 295.5
2054 Male, age 76, both hemispheres 254.0
Dorsal cochlear nucleus
nTPM: 392.4
2802 Male, age 74, right hemisphere 529.4
2058 Male, age 76, both hemispheres 395.0
2378 Male, age 80, both hemispheres 372.2
2187 Female, age 91, both hemispheres 341.5
2370 Male, age 61, both hemispheres 323.9
Dorsal medullary reticular nucleus
nTPM: 333.4
2040 Female, age 85, both hemispheres 364.8
2373 Male, age 61, both hemispheres 320.5
2088 Male, age 76, both hemispheres 315.0
Dorsal motor vagal complex
nTPM: 309.6
2797 Male, age 61, both hemispheres 423.6
2133 Female, age 91, both hemispheres 353.6
2000 Male, age 74, unknown 343.8
2185 Male, age 76, both hemispheres 318.8
2844 Male, age 55, unknown 315.6
2643 Male, age 74, both hemispheres 263.3
2813 Female, age 72, unknown 241.9
2807 Female, age 85, both hemispheres 215.7
Dorsal tegmental nucleus
nTPM: 374.2
2083 Male, age 80, both hemispheres 422.6
2326 Male, age 74, both hemispheres 389.6
1936 Male, age 76, left hemisphere 355.5
2358 Male, age 61, both hemispheres 329.3
Dorsolateral tegmental area
nTPM: 361.2
2751 Female, age 85, both hemispheres 443.6
2654 Male, age 80, both hemispheres 386.8
2141 Male, age 76, both hemispheres 366.5
2337 Male, age 61, both hemispheres 326.0
2360 Male, age 74, both hemispheres 283.1
Gigantocellular reticular nuclei, medullary
nTPM: 379.5
1876 Female, age 85, both hemispheres 424.7
2310 Male, age 80, both hemispheres 396.4
2462 Male, age 74, both hemispheres 388.5
2314 Male, age 61, both hemispheres 361.0
2387 Female, age 91, both hemispheres 357.8
2022 Male, age 76, right hemisphere 348.4
Gigantocellular reticular nuclei, pars
nTPM: 361.2
2084 Female, age 85, both hemispheres 406.6
2168 Male, age 76, both hemispheres 372.8
2336 Male, age 61, both hemispheres 351.0
2330 Male, age 80, both hemispheres 339.3
2706 Male, age 80, both hemispheres 336.2
Inferior olive
nTPM: 386.2
2085 Female, age 85, both hemispheres 442.6
2563 Male, age 74, both hemispheres 393.9
2628 Female, age 91, both hemispheres 378.5
2178 Male, age 61, both hemispheres 364.5
2379 Male, age 80, both hemispheres 351.4
Kolliker-Fuse nucleus
nTPM: 338.1
2163 Male, age 80, both hemispheres 382.3
2315 Male, age 76, right hemisphere 322.8
2793 Female, age 91, left hemisphere 309.0
Lateral lemniscal nuclei
nTPM: 382.1
2453 Male, age 74, right hemisphere 454.5
2169 Male, age 76, both hemispheres 383.1
2036 Male, age 80, both hemispheres 373.5
2320 Female, age 91, left hemisphere 353.6
2746 Female, age 85, left hemisphere 345.7
Lateral medullary reticular nucleus
nTPM: 309.2
2044 Male, age 76, both hemispheres 361.3
2804 Female, age 91, both hemispheres 338.0
2374 Male, age 61, both hemispheres 333.3
2190 Female, age 85, both hemispheres 331.2
2852 Male, age 80, both hemispheres 282.8
2305 Male, age 74, both hemispheres 208.7
Lateral parabrachial nucleus
nTPM: 308.8
2139 Female, age 85, right hemisphere 383.1
2013 Male, age 80, both hemispheres 307.1
2790 Male, age 61, both hemispheres 285.6
2792 Male, age 76, both hemispheres 259.6
Lateral vestibular nucleus
nTPM: 375.5
2184 Male, age 76, both hemispheres 432.2
2311 Male, age 80, both hemispheres 318.8
Locus coeruleus
nTPM: 338.0
2123 Female, age 91, both hemispheres 412.2
1980 Male, age 76, both hemispheres 355.3
2162 Male, age 80, both hemispheres 353.0
2317 Female, age 72, unknown 342.9
2014 Male, age 55, unknown 324.5
2720 Male, age 74, both hemispheres 309.0
2788 Male, age 74, unknown 269.4
Medial olivary nucleus
nTPM: 323.3
2138 Female, age 91, both hemispheres 414.5
1962 Male, age 76, both hemispheres 318.3
2851 Male, age 80, both hemispheres 280.9
1943 Male, age 61, both hemispheres 279.6
Medial parabrachial nucleus
nTPM: 377.3
2463 Female, age 85, right hemisphere 434.6
2170 Female, age 91, both hemispheres 396.9
2786 Male, age 76, both hemispheres 390.7
2854 Male, age 80, both hemispheres 345.2
2156 Male, age 61, both hemispheres 319.1
Medial periolivary nuclei
nTPM: 348.8
2063 Male, age 76, both hemispheres 423.2
2171 Female, age 85, both hemispheres 417.0
2081 Male, age 80, both hemispheres 325.3
2458 Female, age 91, both hemispheres 302.8
2791 Male, age 74, right hemisphere 275.7
Medial vestibular nucleus
nTPM: 371.5
2093 Male, age 80, both hemispheres 424.2
2743 Female, age 85, both hemispheres 382.3
2803 Female, age 91, both hemispheres 378.7
2624 Male, age 61, both hemispheres 373.0
2134 Male, age 76, both hemispheres 353.4
2801 Male, age 74, both hemispheres 317.3
Motor facial nucleus
nTPM: 371.3
2062 Male, age 76, both hemispheres 438.0
2795 Female, age 91, both hemispheres 404.6
2126 Male, age 61, both hemispheres 388.5
2327 Male, age 80, both hemispheres 367.5
2365 Male, age 74, right hemisphere 330.2
2697 Female, age 85, both hemispheres 299.1
Motor hypoglossal nucleus
nTPM: 340.5
2125 Female, age 91, both hemispheres 433.9
2461 Male, age 61, both hemispheres 344.7
2132 Female, age 85, both hemispheres 333.3
2182 Male, age 80, both hemispheres 323.9
2277 Male, age 76, both hemispheres 266.8
Motor trigeminal nucleus
nTPM: 375.9
2560 Male, age 74, both hemispheres 420.7
2309 Male, age 76, both hemispheres 393.4
2079 Male, age 80, both hemispheres 374.5
2335 Male, age 61, both hemispheres 355.5
2321 Female, age 91, both hemispheres 335.2
Nuclei of the trapezoid body
nTPM: 402.7
2159 Male, age 61, both hemispheres 451.5
1983 Male, age 76, both hemispheres 445.8
2735 Female, age 85, both hemispheres 419.4
2166 Male, age 80, both hemispheres 349.6
2368 Female, age 91, both hemispheres 347.1
Nucleus ambiguus
nTPM: 399.1
2096 Female, age 85, both hemispheres 438.1
2071 Male, age 76, both hemispheres 360.1
Nucleus cuneatus
nTPM: 339.8
2564 Male, age 74, both hemispheres 431.6
2131 Male, age 76, both hemispheres 391.8
2562 Male, age 61, both hemispheres 389.1
2100 Male, age 76, both hemispheres 386.6
2805 Female, age 91, both hemispheres 334.8
2376 Male, age 61, both hemispheres 325.0
2808 Female, age 85, both hemispheres 281.4
2381 Male, age 80, both hemispheres 275.8
2380 Male, age 80, both hemispheres 241.8
Nucleus gracilis
nTPM: 294.0
2299 Female, age 85, both hemispheres 355.1
2627 Male, age 74, both hemispheres 275.4
2382 Male, age 80, both hemispheres 251.6
Nucleus raphe magnus
nTPM: 385.6
2160 Male, age 61, both hemispheres 421.3
2172 Female, age 85, both hemispheres 414.2
2455 Male, age 74, both hemispheres 412.5
2328 Male, age 80, both hemispheres 388.0
2459 Female, age 91, both hemispheres 350.2
2051 Male, age 76, both hemispheres 327.6
Nucleus raphe obscurus
nTPM: 303.7
2800 Male, age 61, midline 335.1
2845 Female, age 85, midline 304.7
2142 Male, age 76, midline 271.1
Nucleus raphe pallidus
nTPM: 319.1
2183 Male, age 80, midline 327.5
1924 Male, age 61, midline 315.8
2145 Male, age 76, midline 314.1
Nucleus tractus solitarii
nTPM: 283.6
2656 Male, age 76, both hemispheres 298.6
2144 Female, age 91, right hemisphere 287.0
2191 Female, age 85, both hemispheres 276.0
2307 Male, age 80, both hemispheres 272.9
Paramedian reticular nucleus
nTPM: 334.5
2050 Female, age 85, both hemispheres 379.1
2057 Male, age 80, both hemispheres 368.7
2313 Male, age 61, both hemispheres 334.5
2052 Male, age 76, both hemispheres 255.6
Parvicellular reticular nuclei
nTPM: 393.5
2558 Male, age 74, both hemispheres 412.0
2095 Male, age 76, both hemispheres 392.3
2119 Male, age 80, both hemispheres 376.3
Parvicellular reticular nuclei, medullary
nTPM: 365.2
2189 Female, age 91, both hemispheres 392.0
2091 Female, age 85, both hemispheres 386.1
2181 Male, age 80, left hemisphere 317.5
Pedunculopontine tegmental nucleus
nTPM: 337.3
1921 Female, age 85, both hemispheres 362.0
2334 Male, age 80, both hemispheres 348.1
2338 Male, age 61, both hemispheres 301.8
Peritrigeminal nucleus
nTPM: 362.9
2136 Male, age 76, both hemispheres 390.1
2179 Male, age 61, both hemispheres 361.4
2067 Female, age 85, both hemispheres 337.1
Pontine nuclei
nTPM: 400.6
1863 Male, age 55, unknown 474.7
2787 Female, age 85, both hemispheres 456.2
1968 Male, age 76, left hemisphere 425.0
2109 Female, age 72, unknown 405.8
2454 Male, age 74, left hemisphere 405.1
2727 Male, age 61, right hemisphere 375.3
2115 Male, age 80, left hemisphere 338.5
2319 Female, age 91, both hemispheres 324.1
Pontine raphe nucleus
nTPM: 402.5
2122 Female, age 85, midline 422.7
2853 Male, age 76, midline 382.4
Posteroventral cochlear nucleus
nTPM: 317.9
2752 Female, age 85, both hemispheres 358.1
2371 Male, age 61, both hemispheres 340.7
2070 Male, age 76, both hemispheres 339.5
2341 Male, age 80, both hemispheres 292.6
2135 Female, age 91, both hemispheres 258.4
Prepositus hypoglossal nucleus
nTPM: 394.2
2855 Female, age 85, right hemisphere 405.8
2086 Male, age 80, both hemispheres 382.7
Principal sensory trigeminal nucleus
nTPM: 374.8
2158 Male, age 61, both hemispheres 434.7
2324 Male, age 76, both hemispheres 391.1
2008 Male, age 80, left hemisphere 366.7
2367 Female, age 91, left hemisphere 306.5
Reticular pontine nucleus, caudal
nTPM: 391.1
2559 Male, age 74, both hemispheres 430.4
2332 Male, age 80, right hemisphere 429.1
2457 Female, age 91, both hemispheres 353.0
2092 Male, age 76, both hemispheres 351.9
Reticular pontine nucleus, oral
nTPM: 390.2
2167 Male, age 76, both hemispheres 454.3
2012 Female, age 85, both hemispheres 402.7
1939 Male, age 80, both hemispheres 385.1
2366 Female, age 91, both hemispheres 357.0
2361 Male, age 74, both hemispheres 351.9
Reticulotegmental nucleus
nTPM: 444.9
2452 Male, age 74, both hemispheres 550.2
2333 Male, age 80, both hemispheres 442.1
2325 Male, age 76, both hemispheres 416.4
2322 Female, age 91, both hemispheres 370.8
Spinal trigeminal nucleus, caudal
nTPM: 323.4
2447 Male, age 76, both hemispheres 410.2
2390 Female, age 91, both hemispheres 350.2
2312 Male, age 61, both hemispheres 322.1
2308 Male, age 80, both hemispheres 312.8
2642 Male, age 74, both hemispheres 221.4
Spinal trigeminal nucleus, interpolar
nTPM: 349.7
2066 Male, age 76, right hemisphere 420.8
2625 Male, age 61, both hemispheres 395.2
2389 Female, age 91, both hemispheres 329.7
2033 Male, age 80, both hemispheres 315.2
2386 Female, age 85, both hemispheres 287.7
Spinal trigeminal nucleus, oral
nTPM: 361.8
2164 Male, age 80, both hemispheres 404.3
1978 Male, age 76, both hemispheres 355.6
2737 Female, age 85, both hemispheres 325.6
Spinal vestibular nucleus
nTPM: 354.0
2186 Female, age 91, both hemispheres 402.7
2384 Male, age 74, both hemispheres 360.8
2748 Male, age 76, both hemispheres 359.0
2780 Male, age 80, both hemispheres 343.7
2806 Female, age 85, both hemispheres 339.5
2796 Male, age 61, both hemispheres 318.1
Subcoeruleus area
nTPM: 382.5
2369 Female, age 85, left hemisphere 455.5
2451 Male, age 74, both hemispheres 401.0
2323 Female, age 91, left hemisphere 361.5
2089 Male, age 76, left hemisphere 354.1
1958 Male, age 80, both hemispheres 340.5
Superior olive
nTPM: 323.3
2329 Male, age 80, right hemisphere 353.1
1875 Female, age 85, both hemispheres 334.5
2020 Male, age 76, both hemispheres 325.1
2561 Female, age 91, both hemispheres 316.9
2364 Male, age 74, right hemisphere 286.9
Superior vestibular nucleus
nTPM: 302.8
2061 Male, age 76, both hemispheres 358.1
2015 Male, age 80, both hemispheres 317.1
2383 Male, age 74, both hemispheres 233.2
Ventral medullary reticular nucleus
nTPM: 340.2
2060 Male, age 76, both hemispheres 342.2
2372 Male, age 61, both hemispheres 338.2
Ventral periolivary nuclei
nTPM: 365.2
2130 Female, age 85, both hemispheres 445.3
2165 Male, age 80, both hemispheres 414.4
2023 Male, age 76, both hemispheres 309.5
2794 Female, age 91, left hemisphere 291.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 361.6
2302 Female, age 91, both hemispheres 388.2
1986 Male, age 76, both hemispheres 384.0
2741 Female, age 85, both hemispheres 362.9
2180 Male, age 61, both hemispheres 351.2
2118 Male, age 80, both hemispheres 321.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 350.8
2456 Female, age 91, both hemispheres 389.4
2840 Female, age 85, both hemispheres 367.9
2161 Male, age 80, both hemispheres 365.5
2449 Male, age 74, both hemispheres 362.7
1959 Male, age 76, both hemispheres 309.8
2359 Male, age 61, both hemispheres 309.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 481.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 295.9
FF:10165-103B3 76 years, female 343.0
FF:10182-103D2 60 years, female 248.7
Medulla oblongata
Scaled Tags Per Million: 440.5
FF:10174-103C3 60 years, female 522.3
FF:10038-101F2 18-64 years, mixed 471.5
FF:10155-103A2 76 years, female 327.7
Pons
Scaled Tags Per Million: 481.5
FF:10033-101E6 18-54 years, mixed 481.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 49.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 47.7
Samples: 4

Max nTPM: 50.1
Min nTPM: 45.0
Sample A Female 46.1
Sample B Female 45.0
Sample C Male 50.1
Sample D Male 49.5
Pons
nTPM: 49.6
Samples: 4

Max nTPM: 66.6
Min nTPM: 37.8
Sample A Female 66.6
Sample B Female 37.8
Sample C Male 43.5
Sample D Male 50.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 641.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 641.6
Samples: 4

Max nTPM: 675.1
Min nTPM: 618.3
Sample A Male 632.3
Sample B Male 640.7
Sample C Female 675.1
Sample D Female 618.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.3
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 13.3
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 10.1
Pons
Expression energy: 12.8
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 12.8
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 11.8

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