HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:224.8 nTPM
HPA Brain:159.2 nTPM
GTEx:224.8 nTPM
FANTOM5:459.2 Scaled Tags Per Million
Pig:116.3 nTPM
Mouse:67.2 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 159.2
Sample id Sample description nTPM
Hippocampus
nTPM: 138.5
2529 Female, age 94, left hemisphere 179.7
1911 Female, age 85, right hemisphere 146.3
1855 Male, age 76, left hemisphere 129.6
1898 Male, age 80, left hemisphere 128.7
2621 Female, age 67, right hemisphere 126.6
2148 Female, age 91, left hemisphere 120.2
Dentate gyrus
nTPM: 120.0
2530 Female, age 94, left hemisphere 189.9
2010 Male, age 76, both hemispheres 132.4
2528 Male, age 74, both hemispheres 118.9
2531 Female, age 67, both hemispheres 102.9
2246 Female, age 85, both hemispheres 89.3
1927 Female, age 91, both hemispheres 86.4
Entorhinal gyrus
nTPM: 147.2
2117 Female, age 91, right hemisphere 230.2
2764 Male, age 80, right hemisphere 172.5
2686 Male, age 75, right hemisphere 141.0
2613 Female, age 94, left hemisphere 136.3
1938 Female, age 85, left hemisphere 118.6
1787 Male, age 76, left hemisphere 84.7
Hippocampus, CA1
nTPM: 106.4
2082 Female, age 91, right hemisphere 133.8
2527 Male, age 74, both hemispheres 133.6
1873 Female, age 85, both hemispheres 104.8
2749 Male, age 80, left hemisphere 99.0
2045 Male, age 76, both hemispheres 61.0
Hippocampus, CA2
nTPM: 130.0
1963 Male, age 80, left hemisphere 190.7
2437 Female, age 94, left hemisphere 151.5
2113 Female, age 91, right hemisphere 142.7
2249 Male, age 74, both hemispheres 130.5
1940 Female, age 85, left hemisphere 92.5
1892 Male, age 76, both hemispheres 71.9
Hippocampus, CA3
nTPM: 91.8
1891 Female, age 85, both hemispheres 143.0
1867 Male, age 76, both hemispheres 111.0
2861 Female, age 67, both hemispheres 102.3
2436 Male, age 74, both hemispheres 81.6
2137 Male, age 80, left hemisphere 60.1
2620 Female, age 94, left hemisphere 52.6
Parahippocampal cortex
nTPM: 118.1
2692 Male, age 74, both hemispheres 157.8
2532 Female, age 72, left hemisphere 132.1
1990 Female, age 91, right hemisphere 131.1
2245 Female, age 91, both hemispheres 118.2
2250 Female, age 67, right hemisphere 116.6
1933 Female, age 85, both hemispheres 111.8
1850 Male, age 80, both hemispheres 107.6
2622 Female, age 67, right hemisphere 107.2
2018 Male, age 76, both hemispheres 102.0
2693 Female, age 94, both hemispheres 96.5
Perirhinal gyrus
nTPM: 84.8
2521 Female, age 94, right hemisphere 104.0
1847 Female, age 91, left hemisphere 99.6
1794 Male, age 80, right hemisphere 89.4
1841 Female, age 85, right hemisphere 71.9
2848 Male, age 76, right hemisphere 59.0
Subiculum
nTPM: 159.2
2042 Male, age 76, both hemispheres 201.7
1901 Male, age 80, both hemispheres 167.4
2438 Female, age 94, left hemisphere 157.6
1977 Female, age 85, both hemispheres 151.3
2619 Male, age 74, both hemispheres 141.0
2729 Female, age 91, right hemisphere 136.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 224.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 224.8
Samples: 197

Max nTPM: 598.7
Min nTPM: 10.7
Std nTPM: 104.2
Median nTPM: 213.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 598.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 519.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 490.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 467.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 461.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 461.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 453.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 445.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 436.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 427.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 420.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 459.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 459.2
FF:10169-103B7 60 years, female 481.9
FF:10153-102I9 76 years, female 436.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 116.3
Pig sample Sample description nTPM
Subiculum
nTPM: 89.1
Samples: 4

Max nTPM: 124.7
Min nTPM: 69.5
Sample A Female 124.7
Sample B Female 92.0
Sample C Male 69.5
Sample D Male 70.1
Dorsal hippocampus
nTPM: 116.3
Samples: 4

Max nTPM: 174.2
Min nTPM: 47.2
Sample A Female 174.2
Sample B Female 91.8
Sample C Male 152.1
Sample D Male 47.2
Entorhinal cortex
nTPM: 77.1
Samples: 4

Max nTPM: 90.3
Min nTPM: 64.6
Sample A Female 64.6
Sample B Female 90.3
Sample C Male 83.5
Sample D Male 69.9
Ventral hippocampus
nTPM: 102.9
Samples: 4

Max nTPM: 122.3
Min nTPM: 73.5
Sample A Female 118.8
Sample B Female 73.5
Sample C Male 122.3
Sample D Male 96.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 67.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.2
Samples: 4

Max nTPM: 56.7
Min nTPM: 42.4
Sample A Male 56.7
Sample B Male 50.1
Sample C Female 51.4
Sample D Female 42.4
Hippocampal formation
nTPM: 67.2
Samples: 4

Max nTPM: 79.8
Min nTPM: 51.0
Sample A Male 51.0
Sample B Male 62.3
Sample C Female 79.8
Sample D Female 75.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
70437828 Antisense, RP_050614_03_A03, Mouse strain C57BL/6J (56 days, male) 3.8

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