HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		85.740
RNA expressioni
Consensus:170.8 nTPM
HPA Brain:198.1 nTPM
GTEx:170.8 nTPM
FANTOM5:270.3 Scaled Tags Per Million
Pig:191.7 nTPM
Mouse:271.8 nTPM
Allen mouse:21.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042527
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA042527
Hippocampal formation mean intensity 85.740
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 57.069
Molecular layer of the dentate gyrus 64.957
Granular dentate gyrus 48.801
CA1 - oriens layer 56.091
CA1 - pyramidal layer 53.248
CA1 - radiatum layer 59.233
CA2 - oriens layer 71.341
CA2 - pyramidal layer 64.360
CA2 - radiatum layer 71.132
CA3 - oriens layer 80.500
CA3 - pyramidal layer 85.740
CA3 - radiatum layer 74.459
Stratum lucidum 52.402
Lacunosum moleculare 64.186
Subiculum 53.607

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 198.1
Sample id Sample description nTPM
Hippocampus
nTPM: 186.0
1898 Male, age 80, left hemisphere 248.9
2621 Female, age 67, right hemisphere 226.9
2148 Female, age 91, left hemisphere 175.4
2529 Female, age 94, left hemisphere 169.9
1855 Male, age 76, left hemisphere 164.7
1911 Female, age 85, right hemisphere 130.4
Dentate gyrus
nTPM: 175.1
2530 Female, age 94, left hemisphere 265.4
1927 Female, age 91, both hemispheres 195.1
2010 Male, age 76, both hemispheres 173.1
2531 Female, age 67, both hemispheres 156.9
2246 Female, age 85, both hemispheres 137.0
2528 Male, age 74, both hemispheres 123.4
Entorhinal gyrus
nTPM: 196.4
2764 Male, age 80, right hemisphere 254.4
2613 Female, age 94, left hemisphere 249.0
2686 Male, age 75, right hemisphere 189.7
1787 Male, age 76, left hemisphere 185.6
1938 Female, age 85, left hemisphere 183.7
2117 Female, age 91, right hemisphere 116.2
Hippocampus, CA1
nTPM: 177.3
2749 Male, age 80, left hemisphere 309.7
2527 Male, age 74, both hemispheres 192.1
1873 Female, age 85, both hemispheres 171.3
2082 Female, age 91, right hemisphere 112.2
2045 Male, age 76, both hemispheres 101.4
Hippocampus, CA2
nTPM: 179.6
2437 Female, age 94, left hemisphere 293.2
1892 Male, age 76, both hemispheres 255.2
1963 Male, age 80, left hemisphere 187.8
2249 Male, age 74, both hemispheres 134.1
2113 Female, age 91, right hemisphere 105.0
1940 Female, age 85, left hemisphere 102.4
Hippocampus, CA3
nTPM: 186.6
2861 Female, age 67, both hemispheres 259.3
1867 Male, age 76, both hemispheres 199.7
2137 Male, age 80, left hemisphere 189.9
2436 Male, age 74, both hemispheres 171.5
2620 Female, age 94, left hemisphere 154.8
1891 Female, age 85, both hemispheres 144.2
Parahippocampal cortex
nTPM: 198.1
2245 Female, age 91, both hemispheres 242.3
2622 Female, age 67, right hemisphere 234.7
1850 Male, age 80, both hemispheres 219.3
1990 Female, age 91, right hemisphere 203.5
2692 Male, age 74, both hemispheres 202.3
2693 Female, age 94, both hemispheres 199.9
2532 Female, age 72, left hemisphere 196.1
1933 Female, age 85, both hemispheres 186.7
2250 Female, age 67, right hemisphere 161.1
2018 Male, age 76, both hemispheres 135.1
Perirhinal gyrus
nTPM: 197.4
1847 Female, age 91, left hemisphere 240.7
1794 Male, age 80, right hemisphere 222.7
2848 Male, age 76, right hemisphere 179.9
1841 Female, age 85, right hemisphere 172.5
2521 Female, age 94, right hemisphere 171.3
Subiculum
nTPM: 193.5
2438 Female, age 94, left hemisphere 349.1
1901 Male, age 80, both hemispheres 209.7
2619 Male, age 74, both hemispheres 197.9
1977 Female, age 85, both hemispheres 179.7
2042 Male, age 76, both hemispheres 122.9
2729 Female, age 91, right hemisphere 101.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 170.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 170.8
Samples: 197

Max nTPM: 410.3
Min nTPM: 20.5
Std nTPM: 84.1
Median nTPM: 156.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 410.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 383.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 369.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 362.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 357.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 352.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 348.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 345.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 334.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 329.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 327.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 270.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 270.3
FF:10169-103B7 60 years, female 338.5
FF:10153-102I9 76 years, female 202.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 191.7
Pig sample Sample description nTPM
Subiculum
nTPM: 142.8
Samples: 4

Max nTPM: 201.4
Min nTPM: 111.9
Sample A Female 201.4
Sample B Female 115.1
Sample C Male 142.6
Sample D Male 111.9
Dorsal hippocampus
nTPM: 191.7
Samples: 4

Max nTPM: 262.9
Min nTPM: 125.8
Sample A Female 262.9
Sample B Female 179.1
Sample C Male 199.1
Sample D Male 125.8
Entorhinal cortex
nTPM: 173.6
Samples: 4

Max nTPM: 190.4
Min nTPM: 160.0
Sample A Female 173.8
Sample B Female 190.4
Sample C Male 170.0
Sample D Male 160.0
Ventral hippocampus
nTPM: 189.9
Samples: 4

Max nTPM: 240.9
Min nTPM: 113.3
Sample A Female 240.9
Sample B Female 113.3
Sample C Male 240.6
Sample D Male 164.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 271.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 271.8
Samples: 4

Max nTPM: 281.0
Min nTPM: 263.3
Sample A Male 263.3
Sample B Male 281.0
Sample C Female 276.6
Sample D Female 266.4
Hippocampal formation
nTPM: 252.5
Samples: 4

Max nTPM: 262.1
Min nTPM: 240.7
Sample A Male 253.4
Sample B Male 253.9
Sample C Female 240.7
Sample D Female 262.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.6
68196909 Antisense, RP_041116_01_D02, Mouse strain C57BL/6J (56 days, male) 21.6

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