PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		82.744
Mouse brain, Intensity
Ponsi 		52.357
RNA expressioni
HPA Brain:275.6 nTPM
FANTOM5:585.0 Scaled Tags Per Million
Pig:257.4 nTPM
Mouse:374.6 nTPM
Allen mouse:15.8 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA042527
Medulla oblongata mean intensity 82.744
intensityi
FRONT BACK
Nucleus of the solitary tract 52.173
Raphe magnus nucleus 29.703
Cochlear nucleus 45.554
Lateral paragigantocellular nucleus 34.715
Raphe pallidus nucleus 40.206
Facial nucleus 45.778
Hypoglossal nucleus 82.744
Ambiguus nucleus 57.727
External cuneate nucleus 67.116
Inferior olivary nucleus 45.176
Raphe obscures nucleus 40.334
Dorsal motor nucleus of vagus 64.734
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 49.636
Parabrachial nucleus -
Principle sensory trigeminal nucleus 45.279
Locus coeruleus 52.357
Pontine nucleus 41.147
Vestibular nucleus 36.058
Pontine reticular nucleus, oral 24.348
Lateral lemniscus 36.731
Superior paraolivary nucleus 39.067

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 275.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 135.7
1984 Male, age 76, both hemispheres 169.9
2301 Female, age 85, both hemispheres 144.2
2188 Female, age 91, both hemispheres 125.8
2090 Male, age 80, both hemispheres 102.8
Area postrema
nTPM: 88.3
2054 Male, age 76, both hemispheres 117.7
2306 Male, age 80, both hemispheres 76.6
2799 Male, age 61, both hemispheres 70.8
Dorsal cochlear nucleus
nTPM: 132.3
2058 Male, age 76, both hemispheres 150.0
2802 Male, age 74, right hemisphere 149.2
2370 Male, age 61, both hemispheres 124.5
2187 Female, age 91, both hemispheres 123.8
2378 Male, age 80, both hemispheres 113.7
Dorsal medullary reticular nucleus
nTPM: 173.3
2040 Female, age 85, both hemispheres 234.4
2373 Male, age 61, both hemispheres 144.4
2088 Male, age 76, both hemispheres 141.1
Dorsal motor vagal complex
nTPM: 151.3
2133 Female, age 91, both hemispheres 210.8
2643 Male, age 74, both hemispheres 164.0
2000 Male, age 74, unknown 160.4
2185 Male, age 76, both hemispheres 149.6
2797 Male, age 61, both hemispheres 148.1
2813 Female, age 72, unknown 140.0
2844 Male, age 55, unknown 130.4
2807 Female, age 85, both hemispheres 107.2
Dorsal tegmental nucleus
nTPM: 137.7
2083 Male, age 80, both hemispheres 158.2
2358 Male, age 61, both hemispheres 153.3
1936 Male, age 76, left hemisphere 144.6
2326 Male, age 74, both hemispheres 94.7
Dorsolateral tegmental area
nTPM: 116.7
2141 Male, age 76, both hemispheres 151.7
2654 Male, age 80, both hemispheres 146.3
2751 Female, age 85, both hemispheres 138.9
2360 Male, age 74, both hemispheres 81.8
2337 Male, age 61, both hemispheres 64.9
Gigantocellular reticular nuclei, medullary
nTPM: 171.6
2462 Male, age 74, both hemispheres 275.0
2310 Male, age 80, both hemispheres 190.2
2022 Male, age 76, right hemisphere 164.0
1876 Female, age 85, both hemispheres 160.3
2387 Female, age 91, both hemispheres 135.1
2314 Male, age 61, both hemispheres 105.1
Gigantocellular reticular nuclei, pars
nTPM: 208.5
2168 Male, age 76, both hemispheres 269.6
2084 Female, age 85, both hemispheres 210.5
2336 Male, age 61, both hemispheres 205.1
2706 Male, age 80, both hemispheres 179.6
2330 Male, age 80, both hemispheres 177.9
Inferior olive
nTPM: 103.1
2628 Female, age 91, both hemispheres 160.5
2085 Female, age 85, both hemispheres 133.2
2563 Male, age 74, both hemispheres 82.9
2178 Male, age 61, both hemispheres 71.6
2379 Male, age 80, both hemispheres 67.4
Kolliker-Fuse nucleus
nTPM: 177.3
2163 Male, age 80, both hemispheres 226.1
2793 Female, age 91, left hemisphere 205.8
2315 Male, age 76, right hemisphere 99.8
Lateral lemniscal nuclei
nTPM: 228.3
2169 Male, age 76, both hemispheres 288.4
2453 Male, age 74, right hemisphere 277.7
2746 Female, age 85, left hemisphere 206.0
2036 Male, age 80, both hemispheres 202.1
2320 Female, age 91, left hemisphere 167.3
Lateral medullary reticular nucleus
nTPM: 136.8
2044 Male, age 76, both hemispheres 227.6
2804 Female, age 91, both hemispheres 171.1
2374 Male, age 61, both hemispheres 148.9
2190 Female, age 85, both hemispheres 121.2
2852 Male, age 80, both hemispheres 87.7
2305 Male, age 74, both hemispheres 64.3
Lateral parabrachial nucleus
nTPM: 147.1
2139 Female, age 85, right hemisphere 224.8
2790 Male, age 61, both hemispheres 153.4
2013 Male, age 80, both hemispheres 136.4
2792 Male, age 76, both hemispheres 74.0
Lateral vestibular nucleus
nTPM: 178.7
2184 Male, age 76, both hemispheres 232.6
2311 Male, age 80, both hemispheres 124.8
Locus coeruleus
nTPM: 191.5
2720 Male, age 74, both hemispheres 289.1
2123 Female, age 91, both hemispheres 259.4
2162 Male, age 80, both hemispheres 180.2
1980 Male, age 76, both hemispheres 168.1
2317 Female, age 72, unknown 160.0
2014 Male, age 55, unknown 153.0
2788 Male, age 74, unknown 130.9
Medial olivary nucleus
nTPM: 69.4
2851 Male, age 80, both hemispheres 123.8
2138 Female, age 91, both hemispheres 61.6
1962 Male, age 76, both hemispheres 58.9
1943 Male, age 61, both hemispheres 33.4
Medial parabrachial nucleus
nTPM: 162.1
2854 Male, age 80, both hemispheres 204.8
2156 Male, age 61, both hemispheres 183.4
2786 Male, age 76, both hemispheres 151.0
2463 Female, age 85, right hemisphere 148.6
2170 Female, age 91, both hemispheres 122.6
Medial periolivary nuclei
nTPM: 204.5
2171 Female, age 85, both hemispheres 296.7
2063 Male, age 76, both hemispheres 270.6
2458 Female, age 91, both hemispheres 169.3
2791 Male, age 74, right hemisphere 163.1
2081 Male, age 80, both hemispheres 122.9
Medial vestibular nucleus
nTPM: 212.2
2624 Male, age 61, both hemispheres 278.7
2803 Female, age 91, both hemispheres 217.3
2134 Male, age 76, both hemispheres 213.0
2093 Male, age 80, both hemispheres 198.5
2743 Female, age 85, both hemispheres 184.8
2801 Male, age 74, both hemispheres 181.3
Motor facial nucleus
nTPM: 235.4
2062 Male, age 76, both hemispheres 290.3
2697 Female, age 85, both hemispheres 259.5
2327 Male, age 80, both hemispheres 258.8
2365 Male, age 74, right hemisphere 225.3
2795 Female, age 91, both hemispheres 218.1
2126 Male, age 61, both hemispheres 160.7
Motor hypoglossal nucleus
nTPM: 186.0
2461 Male, age 61, both hemispheres 283.8
2125 Female, age 91, both hemispheres 213.3
2132 Female, age 85, both hemispheres 184.6
2182 Male, age 80, both hemispheres 156.8
2277 Male, age 76, both hemispheres 91.7
Motor trigeminal nucleus
nTPM: 174.7
2079 Male, age 80, both hemispheres 212.2
2560 Male, age 74, both hemispheres 208.1
2335 Male, age 61, both hemispheres 166.5
2309 Male, age 76, both hemispheres 158.0
2321 Female, age 91, both hemispheres 128.8
Nuclei of the trapezoid body
nTPM: 253.8
2159 Male, age 61, both hemispheres 321.4
2735 Female, age 85, both hemispheres 297.9
1983 Male, age 76, both hemispheres 260.3
2166 Male, age 80, both hemispheres 206.9
2368 Female, age 91, both hemispheres 182.7
Nucleus ambiguus
nTPM: 151.6
2096 Female, age 85, both hemispheres 225.5
2071 Male, age 76, both hemispheres 77.6
Nucleus cuneatus
nTPM: 148.1
2131 Male, age 76, both hemispheres 237.7
2100 Male, age 76, both hemispheres 211.8
2564 Male, age 74, both hemispheres 172.9
2562 Male, age 61, both hemispheres 157.0
2805 Female, age 91, both hemispheres 138.4
2376 Male, age 61, both hemispheres 127.4
2381 Male, age 80, both hemispheres 118.7
2808 Female, age 85, both hemispheres 102.2
2380 Male, age 80, both hemispheres 66.6
Nucleus gracilis
nTPM: 98.7
2627 Male, age 74, both hemispheres 120.8
2299 Female, age 85, both hemispheres 94.4
2382 Male, age 80, both hemispheres 81.0
Nucleus raphe magnus
nTPM: 275.6
2172 Female, age 85, both hemispheres 368.6
2160 Male, age 61, both hemispheres 366.8
2455 Male, age 74, both hemispheres 263.0
2328 Male, age 80, both hemispheres 240.8
2051 Male, age 76, both hemispheres 238.6
2459 Female, age 91, both hemispheres 176.1
Nucleus raphe obscurus
nTPM: 103.5
2800 Male, age 61, midline 146.0
2845 Female, age 85, midline 126.5
2142 Male, age 76, midline 38.1
Nucleus raphe pallidus
nTPM: 104.0
2183 Male, age 80, midline 156.3
1924 Male, age 61, midline 92.9
2145 Male, age 76, midline 62.7
Nucleus tractus solitarii
nTPM: 119.0
2191 Female, age 85, both hemispheres 126.5
2656 Male, age 76, both hemispheres 119.4
2307 Male, age 80, both hemispheres 116.7
2144 Female, age 91, right hemisphere 113.4
Paramedian reticular nucleus
nTPM: 180.9
2050 Female, age 85, both hemispheres 241.5
2313 Male, age 61, both hemispheres 202.2
2057 Male, age 80, both hemispheres 171.5
2052 Male, age 76, both hemispheres 108.2
Parvicellular reticular nuclei
nTPM: 198.1
2558 Male, age 74, both hemispheres 279.8
2095 Male, age 76, both hemispheres 160.8
2119 Male, age 80, both hemispheres 153.8
Parvicellular reticular nuclei, medullary
nTPM: 189.9
2091 Female, age 85, both hemispheres 208.0
2189 Female, age 91, both hemispheres 204.2
2181 Male, age 80, left hemisphere 157.4
Pedunculopontine tegmental nucleus
nTPM: 144.0
1921 Female, age 85, both hemispheres 177.3
2334 Male, age 80, both hemispheres 136.2
2338 Male, age 61, both hemispheres 118.4
Peritrigeminal nucleus
nTPM: 166.1
2179 Male, age 61, both hemispheres 181.2
2067 Female, age 85, both hemispheres 162.1
2136 Male, age 76, both hemispheres 155.1
Pontine nuclei
nTPM: 231.4
2787 Female, age 85, both hemispheres 420.4
1968 Male, age 76, left hemisphere 269.6
2727 Male, age 61, right hemisphere 265.0
1863 Male, age 55, unknown 264.2
2109 Female, age 72, unknown 197.8
2115 Male, age 80, left hemisphere 156.5
2454 Male, age 74, left hemisphere 155.6
2319 Female, age 91, both hemispheres 122.2
Pontine raphe nucleus
nTPM: 204.1
2122 Female, age 85, midline 235.6
2853 Male, age 76, midline 172.6
Posteroventral cochlear nucleus
nTPM: 117.5
2752 Female, age 85, both hemispheres 187.0
2070 Male, age 76, both hemispheres 143.6
2371 Male, age 61, both hemispheres 120.3
2341 Male, age 80, both hemispheres 93.5
2135 Female, age 91, both hemispheres 42.8
Prepositus hypoglossal nucleus
nTPM: 173.3
2855 Female, age 85, right hemisphere 187.1
2086 Male, age 80, both hemispheres 159.5
Principal sensory trigeminal nucleus
nTPM: 233.8
2158 Male, age 61, both hemispheres 339.5
2008 Male, age 80, left hemisphere 238.4
2324 Male, age 76, both hemispheres 195.0
2367 Female, age 91, left hemisphere 162.2
Reticular pontine nucleus, caudal
nTPM: 197.4
2332 Male, age 80, right hemisphere 283.3
2092 Male, age 76, both hemispheres 198.1
2457 Female, age 91, both hemispheres 186.4
2559 Male, age 74, both hemispheres 121.7
Reticular pontine nucleus, oral
nTPM: 179.7
2012 Female, age 85, both hemispheres 205.2
2361 Male, age 74, both hemispheres 184.3
2366 Female, age 91, both hemispheres 173.8
2167 Male, age 76, both hemispheres 173.0
1939 Male, age 80, both hemispheres 162.4
Reticulotegmental nucleus
nTPM: 176.5
2325 Male, age 76, both hemispheres 215.6
2452 Male, age 74, both hemispheres 171.7
2333 Male, age 80, both hemispheres 160.4
2322 Female, age 91, both hemispheres 158.3
Spinal trigeminal nucleus, caudal
nTPM: 195.6
2390 Female, age 91, both hemispheres 320.0
2447 Male, age 76, both hemispheres 244.4
2642 Male, age 74, both hemispheres 153.9
2312 Male, age 61, both hemispheres 132.3
2308 Male, age 80, both hemispheres 127.2
Spinal trigeminal nucleus, interpolar
nTPM: 242.1
2625 Male, age 61, both hemispheres 368.4
2066 Male, age 76, right hemisphere 253.1
2389 Female, age 91, both hemispheres 237.0
2033 Male, age 80, both hemispheres 179.5
2386 Female, age 85, both hemispheres 172.4
Spinal trigeminal nucleus, oral
nTPM: 196.1
2164 Male, age 80, both hemispheres 237.6
2737 Female, age 85, both hemispheres 208.4
1978 Male, age 76, both hemispheres 142.2
Spinal vestibular nucleus
nTPM: 177.8
2796 Male, age 61, both hemispheres 226.2
2186 Female, age 91, both hemispheres 201.0
2780 Male, age 80, both hemispheres 187.0
2806 Female, age 85, both hemispheres 180.2
2748 Male, age 76, both hemispheres 160.6
2384 Male, age 74, both hemispheres 111.8
Subcoeruleus area
nTPM: 166.2
2089 Male, age 76, left hemisphere 208.7
1958 Male, age 80, both hemispheres 202.3
2323 Female, age 91, left hemisphere 184.3
2451 Male, age 74, both hemispheres 124.1
2369 Female, age 85, left hemisphere 111.7
Superior olive
nTPM: 212.5
1875 Female, age 85, both hemispheres 281.2
2561 Female, age 91, both hemispheres 211.5
2329 Male, age 80, right hemisphere 209.8
2020 Male, age 76, both hemispheres 200.3
2364 Male, age 74, right hemisphere 159.9
Superior vestibular nucleus
nTPM: 123.0
2015 Male, age 80, both hemispheres 146.1
2061 Male, age 76, both hemispheres 132.9
2383 Male, age 74, both hemispheres 90.1
Ventral medullary reticular nucleus
nTPM: 125.6
2060 Male, age 76, both hemispheres 143.3
2372 Male, age 61, both hemispheres 107.8
Ventral periolivary nuclei
nTPM: 237.5
2165 Male, age 80, both hemispheres 291.7
2130 Female, age 85, both hemispheres 283.7
2794 Female, age 91, left hemisphere 215.1
2023 Male, age 76, both hemispheres 159.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 151.5
2741 Female, age 85, both hemispheres 197.9
1986 Male, age 76, both hemispheres 168.5
2302 Female, age 91, both hemispheres 152.4
2180 Male, age 61, both hemispheres 142.4
2118 Male, age 80, both hemispheres 96.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 203.4
2449 Male, age 74, both hemispheres 261.9
2840 Female, age 85, both hemispheres 251.6
1959 Male, age 76, both hemispheres 221.8
2161 Male, age 80, both hemispheres 203.7
2456 Female, age 91, both hemispheres 144.8
2359 Male, age 61, both hemispheres 136.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 585.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 276.1
FF:10182-103D2 60 years, female 387.7
FF:10165-103B3 76 years, female 164.4
Medulla oblongata
Scaled Tags Per Million: 164.2
FF:10038-101F2 18-64 years, mixed 273.4
FF:10155-103A2 76 years, female 111.6
FF:10174-103C3 60 years, female 107.7
Pons
Scaled Tags Per Million: 585.0
FF:10033-101E6 18-54 years, mixed 585.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 257.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 179.7
Samples: 4

Max nTPM: 221.6
Min nTPM: 104.6
Sample A Female 172.1
Sample B Female 220.6
Sample C Male 221.6
Sample D Male 104.6
Pons
nTPM: 257.4
Samples: 4

Max nTPM: 342.8
Min nTPM: 151.8
Sample A Female 342.8
Sample B Female 151.8
Sample C Male 210.5
Sample D Male 324.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 374.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 374.7
Samples: 4

Max nTPM: 385.5
Min nTPM: 362.1
Sample A Male 382.3
Sample B Male 368.7
Sample C Female 385.5
Sample D Female 362.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 15.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.1
68196909 Antisense, RP_041116_01_D02, Mouse strain C57BL/6J (56 days, male) 14.1
Pons
Expression energy: 15.8
68196909 Antisense, RP_041116_01_D02, Mouse strain C57BL/6J (56 days, male) 15.8

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