We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PTMA
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PTMA
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:840.5 nTPM
HPA Brain:1124.7 nTPM
GTEx:840.5 nTPM
FANTOM5:45.7 Scaled Tags Per Million
Pig:627.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047183
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1124.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 611.4
2288 Male, age 75, left hemisphere 912.5
2290 Female, age 72, unknown 674.8
2846 Female, age 79, unknown 651.5
2481 Female, age 94, left hemisphere 599.7
1781 Male, age 74, unknown 584.8
2289 Male, age 61, right hemisphere 530.6
1854 Male, age 80, left hemisphere 478.2
1857 Female, age 85, left hemisphere 458.9
Globus pallidus, externus
nTPM: 947.0
1996 Male, age 80, right hemisphere 1154.1
2567 Female, age 72, unknown 1067.3
2646 Male, age 61, right hemisphere 887.7
2772 Female, age 79, unknown 861.8
2395 Male, age 75, both hemispheres 764.2
Globus pallidus, internus
nTPM: 1124.7
2287 Male, age 75, right hemisphere 1363.5
2483 Female, age 94, right hemisphere 1266.2
2111 Female, age 85, right hemisphere 1239.9
2566 Female, age 72, unknown 1096.0
1818 Male, age 74, unknown 1019.7
2778 Female, age 91, both hemispheres 961.9
2037 Male, age 80, right hemisphere 925.5
Nucleus accumbens
nTPM: 611.5
2698 Female, age 72, unknown 898.1
2391 Female, age 94, left hemisphere 796.2
2286 Male, age 75, left hemisphere 721.1
2732 Male, age 80, right hemisphere 669.2
1806 Female, age 85, left hemisphere 573.9
1783 Male, age 74, unknown 524.3
2824 Male, age 61, right hemisphere 358.8
1856 Female, age 91, right hemisphere 350.7
Nucleus basalis of Meynert
nTPM: 708.8
2821 Male, age 75, both hemispheres 895.4
2569 Male, age 61, both hemispheres 779.8
2484 Female, age 94, left hemisphere 627.5
2393 Male, age 80, right hemisphere 532.5
Nucleus of the diagonal band
nTPM: 369.8
1979 Male, age 74, unknown 444.8
1812 Female, age 91, both hemispheres 423.0
2195 Female, age 85, both hemispheres 350.8
2775 Male, age 80, right hemisphere 320.0
2029 Male, age 61, right hemisphere 310.6
Putamen
nTPM: 620.5
2647 Male, age 75, left hemisphere 786.0
2489 Female, age 72, unknown 780.1
1829 Male, age 74, unknown 725.7
2482 Female, age 94, left hemisphere 694.9
1937 Female, age 91, right hemisphere 482.9
2466 Female, age 79, unknown 476.8
1838 Male, age 80, right hemisphere 397.4
Septal nuclei
nTPM: 418.8
2199 Male, age 80, right hemisphere 535.7
2394 Male, age 61, left hemisphere 504.0
2629 Female, age 94, right hemisphere 483.3
2059 Female, age 85, both hemispheres 419.0
2009 Female, age 91, both hemispheres 364.2
1960 Male, age 74, unknown 326.9
2031 Female, age 72, unknown 298.6
Stria terminalis, bed nucleus
nTPM: 387.0
2201 Male, age 74, unknown 451.8
1974 Female, age 91, both hemispheres 412.9
2486 Female, age 94, both hemispheres 296.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

840.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 728.3
Samples: 246

Max nTPM: 1543.4
Min nTPM: 306.4
Std nTPM: 189.0
Median nTPM: 702.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1543.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1353.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1328.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1214.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1207.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1179.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1164.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1152.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1151.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1125.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1115.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1104.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1104.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1084.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1040.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1035.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1031.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1028.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1027.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1012.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1004.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 992.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 969.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 965.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 963.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 956.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 952.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 945.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 943.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 942.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 930.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 929.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 919.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 912.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 909.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 907.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 905.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 897.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 896.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 891.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 891.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 891.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 890.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 888.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 887.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 886.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 882.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 881.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 880.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 873.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 870.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 866.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 863.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 857.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 857.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 855.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 849.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 848.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 840.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 837.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 831.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 827.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 823.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 823.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 818.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 815.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 815.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 813.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 812.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 811.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 809.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 807.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 807.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 807.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 806.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 805.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 805.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 805.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 798.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 796.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 788.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 786.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 785.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 785.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 780.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 779.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 778.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 776.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 775.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 768.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 768.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 762.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 760.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 757.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 755.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 755.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 755.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 755.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 754.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 750.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 750.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 750.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 748.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 745.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 743.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 742.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 739.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 737.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 735.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 734.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 734.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 729.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 728.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 728.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 724.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 724.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 719.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 716.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 711.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 710.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 709.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 703.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 702.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 701.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 700.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 700.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 699.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 693.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 690.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 688.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 685.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 681.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 681.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 679.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 679.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 674.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 673.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 671.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 671.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 669.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 669.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 668.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 667.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 666.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 665.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 664.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 661.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 658.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 658.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 658.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 656.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 655.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 652.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 650.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 648.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 648.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 647.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 647.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 642.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 639.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 637.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 637.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 636.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 632.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 630.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 629.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 625.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 623.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 620.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 618.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 616.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 615.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 614.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 613.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 610.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 609.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 604.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 603.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 601.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 598.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 593.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 593.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 592.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 591.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 591.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 588.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 588.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 587.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 586.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 583.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 581.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 579.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 575.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 573.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 571.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 570.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 568.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 564.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 564.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 564.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 563.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 561.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 561.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 561.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 560.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 560.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 558.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 555.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 552.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 551.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 545.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 545.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 540.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 534.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 530.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 527.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 525.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 520.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 517.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 515.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 512.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 510.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 505.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 505.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 499.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 495.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 490.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 487.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 486.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 486.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 481.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 480.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 479.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 473.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 469.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 464.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 463.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 447.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 446.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 439.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 423.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 421.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 412.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 407.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 385.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 306.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 600.1
Samples: 246

Max nTPM: 1715.0
Min nTPM: 300.1
Std nTPM: 194.9
Median nTPM: 558.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1715.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1195.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1152.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1142.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1135.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1112.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1105.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1078.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1038.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1036.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1028.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1028.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 976.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 967.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 963.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 959.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 957.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 956.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 948.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 945.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 937.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 917.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 883.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 876.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 850.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 840.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 819.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 818.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 813.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 804.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 798.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 790.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 788.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 788.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 784.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 783.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 780.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 779.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 768.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 767.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 763.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 761.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 760.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 758.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 751.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 745.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 735.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 732.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 730.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 726.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 726.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 720.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 717.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 712.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 712.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 707.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 701.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 701.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 699.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 693.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 685.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 684.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 683.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 681.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 680.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 678.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 673.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 672.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 670.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 668.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 667.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 662.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 650.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 646.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 639.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 637.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 636.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 635.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 632.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 632.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 631.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 631.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 627.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 624.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 623.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 623.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 623.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 622.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 620.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 613.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 612.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 610.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 608.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 608.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 606.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 606.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 604.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 603.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 603.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 600.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 596.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 595.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 590.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 588.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 588.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 585.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 585.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 584.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 581.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 581.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 577.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 577.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 575.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 575.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 572.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 568.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 565.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 565.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 564.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 564.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 563.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 559.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 559.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 557.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 553.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 545.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 544.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 544.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 544.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 541.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 541.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 538.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 537.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 536.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 536.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 529.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 526.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 524.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 523.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 522.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 521.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 518.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 518.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 518.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 515.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 513.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 510.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 509.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 507.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 506.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 505.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 505.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 503.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 503.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 503.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 503.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 502.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 502.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 501.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 501.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 499.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 498.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 498.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 496.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 495.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 494.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 492.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 488.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 485.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 484.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 483.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 481.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 475.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 475.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 473.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 472.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 471.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 471.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 471.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 470.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 470.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 470.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 469.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 467.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 466.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 465.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 465.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 464.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 463.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 463.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 462.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 461.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 461.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 456.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 453.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 450.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 450.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 449.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 449.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 449.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 449.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 447.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 446.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 444.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 444.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 442.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 442.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 441.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 441.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 436.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 435.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 430.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 428.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 425.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 419.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 418.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 418.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 417.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 416.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 416.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 415.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 409.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 408.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 407.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 404.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 404.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 403.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 386.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 380.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 372.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 371.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 371.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 370.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 368.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 366.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 362.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 357.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 355.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 353.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 339.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 339.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 337.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 335.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 328.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 317.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 300.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 840.5
Samples: 205

Max nTPM: 2050.4
Min nTPM: 361.0
Std nTPM: 232.3
Median nTPM: 798.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2050.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1578.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1486.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1473.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1463.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1454.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1444.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1410.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1367.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1335.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1280.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1265.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1243.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1240.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1194.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1178.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1172.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1143.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1135.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1104.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1098.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1088.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1085.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1075.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1073.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1071.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1070.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1062.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1057.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1048.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1046.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1045.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1042.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1035.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1034.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1034.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1032.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1017.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1017.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1016.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1016.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1013.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1010.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 987.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 986.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 978.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 971.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 970.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 970.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 947.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 934.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 934.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 931.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 928.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 920.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 919.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 918.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 917.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 908.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 907.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 906.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 903.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 900.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 899.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 896.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 894.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 893.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 891.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 890.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 887.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 883.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 880.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 879.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 873.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 870.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 870.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 864.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 863.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 856.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 848.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 844.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 842.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 838.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 836.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 836.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 831.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 830.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 825.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 823.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 820.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 819.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 818.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 818.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 817.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 816.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 815.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 814.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 813.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 806.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 805.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 800.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 799.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 798.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 798.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 794.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 792.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 789.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 788.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 783.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 777.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 777.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 776.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 774.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 774.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 773.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 772.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 769.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 769.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 765.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 764.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 763.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 763.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 762.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 759.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 758.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 756.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 753.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 753.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 749.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 749.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 748.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 747.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 744.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 740.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 736.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 728.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 726.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 724.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 722.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 721.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 720.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 715.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 713.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 713.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 712.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 709.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 704.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 700.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 698.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 698.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 693.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 691.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 688.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 685.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 683.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 677.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 677.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 672.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 669.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 667.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 667.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 660.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 659.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 657.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 656.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 655.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 652.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 652.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 650.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 648.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 648.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 640.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 638.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 636.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 631.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 628.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 628.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 627.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 627.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 626.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 623.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 619.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 619.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 618.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 615.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 614.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 612.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 605.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 580.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 572.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 571.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 567.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 562.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 562.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 551.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 549.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 546.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 538.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 534.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 522.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 522.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 415.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 414.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 396.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 361.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.2
FF:10164-103B2 76 years, female 31.2
Nucleus accumbens
Scaled Tags Per Million: 39.6
FF:10037-101F1 23-56 years, mixed 39.6
Putamen
Scaled Tags Per Million: 31.0
FF:10176-103C5 60 years, female 31.0
Globus pallidus
Scaled Tags Per Million: 45.7
FF:10161-103A8 76 years, female 57.0
FF:10175-103C4 60 years, female 34.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

627.7
Pig sample Sample description nTPM
Caudate
nTPM: 391.7
Samples: 4

Max nTPM: 430.9
Min nTPM: 351.0
Sample A Female 430.9
Sample B Female 383.9
Sample C Male 400.9
Sample D Male 351.0
Putamen
nTPM: 627.7
Samples: 4

Max nTPM: 923.4
Min nTPM: 458.7
Sample A Female 923.4
Sample B Female 458.7
Sample C Male 572.9
Sample D Male 555.7
Septum
nTPM: 516.0
Samples: 4

Max nTPM: 627.7
Min nTPM: 446.3
Sample A Female 627.7
Sample B Female 446.3
Sample C Male 451.7
Sample D Male 538.3
Ventral pallidum
nTPM: 516.4
Samples: 4

Max nTPM: 596.5
Min nTPM: 417.4
Sample A Female 417.4
Sample B Female 520.6
Sample C Male 531.2
Sample D Male 596.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org