HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:657.1 nTPM
HPA Brain:503.8 nTPM
GTEx:657.1 nTPM
FANTOM5:1202.5 Scaled Tags Per Million
Pig:428.0 nTPM
Mouse:146.4 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040520
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 503.8
Sample id Sample description nTPM
Hippocampus
nTPM: 435.3
2621 Female, age 67, right hemisphere 552.0
2529 Female, age 94, left hemisphere 495.7
1898 Male, age 80, left hemisphere 481.8
1911 Female, age 85, right hemisphere 458.6
1855 Male, age 76, left hemisphere 371.9
2148 Female, age 91, left hemisphere 251.9
Dentate gyrus
nTPM: 384.6
2530 Female, age 94, left hemisphere 532.6
2528 Male, age 74, both hemispheres 454.0
2010 Male, age 76, both hemispheres 366.7
2531 Female, age 67, both hemispheres 347.2
2246 Female, age 85, both hemispheres 346.4
1927 Female, age 91, both hemispheres 260.5
Entorhinal gyrus
nTPM: 360.2
2117 Female, age 91, right hemisphere 503.6
1787 Male, age 76, left hemisphere 384.2
2764 Male, age 80, right hemisphere 350.0
1938 Female, age 85, left hemisphere 332.2
2613 Female, age 94, left hemisphere 305.5
2686 Male, age 75, right hemisphere 286.1
Hippocampus, CA1
nTPM: 310.0
2527 Male, age 74, both hemispheres 412.9
1873 Female, age 85, both hemispheres 372.2
2082 Female, age 91, right hemisphere 292.3
2045 Male, age 76, both hemispheres 246.3
2749 Male, age 80, left hemisphere 226.2
Hippocampus, CA2
nTPM: 408.8
2437 Female, age 94, left hemisphere 600.9
2249 Male, age 74, both hemispheres 483.2
1963 Male, age 80, left hemisphere 411.4
1940 Female, age 85, left hemisphere 344.8
2113 Female, age 91, right hemisphere 339.0
1892 Male, age 76, both hemispheres 273.3
Hippocampus, CA3
nTPM: 322.9
1891 Female, age 85, both hemispheres 496.3
2436 Male, age 74, both hemispheres 454.0
1867 Male, age 76, both hemispheres 390.9
2861 Female, age 67, both hemispheres 228.3
2137 Male, age 80, left hemisphere 215.2
2620 Female, age 94, left hemisphere 152.5
Parahippocampal cortex
nTPM: 360.2
2018 Male, age 76, both hemispheres 487.4
2532 Female, age 72, left hemisphere 446.5
1990 Female, age 91, right hemisphere 421.5
1850 Male, age 80, both hemispheres 375.6
2692 Male, age 74, both hemispheres 371.1
1933 Female, age 85, both hemispheres 339.1
2245 Female, age 91, both hemispheres 338.3
2250 Female, age 67, right hemisphere 329.7
2693 Female, age 94, both hemispheres 311.3
2622 Female, age 67, right hemisphere 181.6
Perirhinal gyrus
nTPM: 328.7
2521 Female, age 94, right hemisphere 499.8
1794 Male, age 80, right hemisphere 312.0
1841 Female, age 85, right hemisphere 306.6
1847 Female, age 91, left hemisphere 276.2
2848 Male, age 76, right hemisphere 248.9
Subiculum
nTPM: 503.8
2438 Female, age 94, left hemisphere 645.7
2042 Male, age 76, both hemispheres 619.7
2619 Male, age 74, both hemispheres 477.2
1901 Male, age 80, both hemispheres 471.8
1977 Female, age 85, both hemispheres 447.1
2729 Female, age 91, right hemisphere 361.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 657.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 657.1
Samples: 197

Max nTPM: 1635.9
Min nTPM: 157.7
Std nTPM: 295.3
Median nTPM: 630.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 1635.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1547.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 1532.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1479.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1372.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1353.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1331.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 1311.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1286.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 1274.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1268.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1202.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1202.5
FF:10153-102I9 76 years, female 1263.6
FF:10169-103B7 60 years, female 1141.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 428.0
Pig sample Sample description nTPM
Subiculum
nTPM: 130.4
Samples: 4

Max nTPM: 165.0
Min nTPM: 107.0
Sample A Female 107.0
Sample B Female 165.0
Sample C Male 107.1
Sample D Male 142.3
Dorsal hippocampus
nTPM: 428.1
Samples: 4

Max nTPM: 720.1
Min nTPM: 115.1
Sample A Female 598.1
Sample B Female 278.9
Sample C Male 720.1
Sample D Male 115.1
Entorhinal cortex
nTPM: 96.2
Samples: 4

Max nTPM: 157.3
Min nTPM: 69.1
Sample A Female 69.1
Sample B Female 157.3
Sample C Male 77.9
Sample D Male 80.5
Ventral hippocampus
nTPM: 258.9
Samples: 4

Max nTPM: 353.3
Min nTPM: 110.3
Sample A Female 297.0
Sample B Female 110.3
Sample C Male 274.9
Sample D Male 353.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 146.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.1
Samples: 4

Max nTPM: 140.5
Min nTPM: 106.4
Sample A Male 140.5
Sample B Male 106.4
Sample C Female 140.4
Sample D Female 113.1
Hippocampal formation
nTPM: 146.4
Samples: 4

Max nTPM: 191.9
Min nTPM: 122.2
Sample A Male 122.2
Sample B Male 131.5
Sample C Female 191.9
Sample D Female 140.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 8.4

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