PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:917.6 nTPM
FANTOM5:2334.7 Scaled Tags Per Million
Pig:2620.5 nTPM
Mouse:434.2 nTPM
Allen mouse:15.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 917.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 689.2
2301 Female, age 85, both hemispheres 931.8
2188 Female, age 91, both hemispheres 789.2
2090 Male, age 80, both hemispheres 674.9
1984 Male, age 76, both hemispheres 360.9
Area postrema
nTPM: 514.9
2306 Male, age 80, both hemispheres 839.7
2054 Male, age 76, both hemispheres 399.7
2799 Male, age 61, both hemispheres 305.3
Dorsal cochlear nucleus
nTPM: 588.4
2378 Male, age 80, both hemispheres 746.5
2187 Female, age 91, both hemispheres 727.2
2370 Male, age 61, both hemispheres 531.1
2802 Male, age 74, right hemisphere 480.0
2058 Male, age 76, both hemispheres 456.8
Dorsal medullary reticular nucleus
nTPM: 606.3
2373 Male, age 61, both hemispheres 737.9
2040 Female, age 85, both hemispheres 616.9
2088 Male, age 76, both hemispheres 464.1
Dorsal motor vagal complex
nTPM: 430.4
2185 Male, age 76, both hemispheres 667.8
2000 Male, age 74, unknown 521.4
2813 Female, age 72, unknown 517.3
2807 Female, age 85, both hemispheres 450.4
2133 Female, age 91, both hemispheres 412.2
2643 Male, age 74, both hemispheres 338.3
2844 Male, age 55, unknown 273.6
2797 Male, age 61, both hemispheres 262.3
Dorsal tegmental nucleus
nTPM: 529.0
2083 Male, age 80, both hemispheres 649.9
2326 Male, age 74, both hemispheres 596.3
1936 Male, age 76, left hemisphere 448.9
2358 Male, age 61, both hemispheres 420.9
Dorsolateral tegmental area
nTPM: 545.4
2751 Female, age 85, both hemispheres 811.3
2654 Male, age 80, both hemispheres 614.9
2337 Male, age 61, both hemispheres 511.0
2360 Male, age 74, both hemispheres 438.8
2141 Male, age 76, both hemispheres 351.2
Gigantocellular reticular nuclei, medullary
nTPM: 681.0
2314 Male, age 61, both hemispheres 1085.4
2387 Female, age 91, both hemispheres 831.8
1876 Female, age 85, both hemispheres 754.0
2310 Male, age 80, both hemispheres 522.8
2022 Male, age 76, right hemisphere 496.9
2462 Male, age 74, both hemispheres 395.4
Gigantocellular reticular nuclei, pars
nTPM: 575.6
2336 Male, age 61, both hemispheres 765.0
2706 Male, age 80, both hemispheres 632.9
2330 Male, age 80, both hemispheres 581.4
2084 Female, age 85, both hemispheres 509.4
2168 Male, age 76, both hemispheres 389.4
Inferior olive
nTPM: 808.3
2178 Male, age 61, both hemispheres 951.0
2628 Female, age 91, both hemispheres 814.9
2379 Male, age 80, both hemispheres 793.9
2563 Male, age 74, both hemispheres 786.1
2085 Female, age 85, both hemispheres 695.7
Kolliker-Fuse nucleus
nTPM: 689.6
2793 Female, age 91, left hemisphere 972.5
2315 Male, age 76, right hemisphere 574.8
2163 Male, age 80, both hemispheres 521.5
Lateral lemniscal nuclei
nTPM: 566.0
2320 Female, age 91, left hemisphere 744.4
2036 Male, age 80, both hemispheres 567.1
2746 Female, age 85, left hemisphere 540.3
2169 Male, age 76, both hemispheres 521.0
2453 Male, age 74, right hemisphere 457.2
Lateral medullary reticular nucleus
nTPM: 796.0
2374 Male, age 61, both hemispheres 1100.6
2305 Male, age 74, both hemispheres 987.0
2852 Male, age 80, both hemispheres 776.5
2190 Female, age 85, both hemispheres 752.1
2804 Female, age 91, both hemispheres 638.0
2044 Male, age 76, both hemispheres 521.8
Lateral parabrachial nucleus
nTPM: 640.0
2792 Male, age 76, both hemispheres 1102.4
2013 Male, age 80, both hemispheres 569.5
2139 Female, age 85, right hemisphere 480.6
2790 Male, age 61, both hemispheres 407.6
Lateral vestibular nucleus
nTPM: 573.3
2311 Male, age 80, both hemispheres 646.6
2184 Male, age 76, both hemispheres 500.0
Locus coeruleus
nTPM: 331.9
2720 Male, age 74, both hemispheres 473.6
2162 Male, age 80, both hemispheres 431.2
2788 Male, age 74, unknown 325.0
2317 Female, age 72, unknown 313.0
2123 Female, age 91, both hemispheres 274.9
2014 Male, age 55, unknown 264.4
1980 Male, age 76, both hemispheres 241.4
Medial olivary nucleus
nTPM: 856.9
1943 Male, age 61, both hemispheres 1063.7
1962 Male, age 76, both hemispheres 933.3
2851 Male, age 80, both hemispheres 815.7
2138 Female, age 91, both hemispheres 614.7
Medial parabrachial nucleus
nTPM: 644.9
2170 Female, age 91, both hemispheres 835.9
2854 Male, age 80, both hemispheres 731.9
2463 Female, age 85, right hemisphere 607.8
2786 Male, age 76, both hemispheres 568.9
2156 Male, age 61, both hemispheres 480.2
Medial periolivary nuclei
nTPM: 517.3
2791 Male, age 74, right hemisphere 686.5
2458 Female, age 91, both hemispheres 647.4
2081 Male, age 80, both hemispheres 511.1
2063 Male, age 76, both hemispheres 398.6
2171 Female, age 85, both hemispheres 343.2
Medial vestibular nucleus
nTPM: 650.7
2801 Male, age 74, both hemispheres 961.5
2803 Female, age 91, both hemispheres 814.8
2624 Male, age 61, both hemispheres 799.5
2093 Male, age 80, both hemispheres 583.3
2743 Female, age 85, both hemispheres 449.5
2134 Male, age 76, both hemispheres 295.7
Motor facial nucleus
nTPM: 615.2
2697 Female, age 85, both hemispheres 855.7
2365 Male, age 74, right hemisphere 812.0
2126 Male, age 61, both hemispheres 699.3
2795 Female, age 91, both hemispheres 550.4
2327 Male, age 80, both hemispheres 433.4
2062 Male, age 76, both hemispheres 340.2
Motor hypoglossal nucleus
nTPM: 584.2
2132 Female, age 85, both hemispheres 711.9
2182 Male, age 80, both hemispheres 662.4
2125 Female, age 91, both hemispheres 662.0
2461 Male, age 61, both hemispheres 625.2
2277 Male, age 76, both hemispheres 259.3
Motor trigeminal nucleus
nTPM: 561.2
2321 Female, age 91, both hemispheres 675.7
2560 Male, age 74, both hemispheres 664.8
2335 Male, age 61, both hemispheres 538.7
2309 Male, age 76, both hemispheres 505.5
2079 Male, age 80, both hemispheres 421.4
Nuclei of the trapezoid body
nTPM: 460.5
2166 Male, age 80, both hemispheres 549.6
2368 Female, age 91, both hemispheres 547.3
2159 Male, age 61, both hemispheres 509.3
1983 Male, age 76, both hemispheres 420.8
2735 Female, age 85, both hemispheres 275.2
Nucleus ambiguus
nTPM: 633.6
2071 Male, age 76, both hemispheres 856.9
2096 Female, age 85, both hemispheres 410.3
Nucleus cuneatus
nTPM: 577.6
2808 Female, age 85, both hemispheres 769.8
2380 Male, age 80, both hemispheres 727.0
2376 Male, age 61, both hemispheres 711.1
2381 Male, age 80, both hemispheres 703.5
2100 Male, age 76, both hemispheres 542.6
2564 Male, age 74, both hemispheres 511.6
2131 Male, age 76, both hemispheres 457.8
2805 Female, age 91, both hemispheres 394.8
2562 Male, age 61, both hemispheres 379.6
Nucleus gracilis
nTPM: 731.8
2382 Male, age 80, both hemispheres 884.3
2627 Male, age 74, both hemispheres 733.4
2299 Female, age 85, both hemispheres 577.6
Nucleus raphe magnus
nTPM: 487.5
2459 Female, age 91, both hemispheres 654.7
2455 Male, age 74, both hemispheres 575.2
2051 Male, age 76, both hemispheres 557.5
2328 Male, age 80, both hemispheres 547.6
2160 Male, age 61, both hemispheres 318.7
2172 Female, age 85, both hemispheres 271.5
Nucleus raphe obscurus
nTPM: 917.6
2845 Female, age 85, midline 1112.3
2800 Male, age 61, midline 929.7
2142 Male, age 76, midline 710.9
Nucleus raphe pallidus
nTPM: 717.3
2145 Male, age 76, midline 840.6
2183 Male, age 80, midline 659.8
1924 Male, age 61, midline 651.4
Nucleus tractus solitarii
nTPM: 306.2
2191 Female, age 85, both hemispheres 337.5
2656 Male, age 76, both hemispheres 300.3
2307 Male, age 80, both hemispheres 296.7
2144 Female, age 91, right hemisphere 290.5
Paramedian reticular nucleus
nTPM: 568.3
2052 Male, age 76, both hemispheres 698.7
2050 Female, age 85, both hemispheres 536.5
2313 Male, age 61, both hemispheres 525.0
2057 Male, age 80, both hemispheres 512.9
Parvicellular reticular nuclei
nTPM: 507.3
2095 Male, age 76, both hemispheres 620.0
2119 Male, age 80, both hemispheres 526.0
2558 Male, age 74, both hemispheres 376.0
Parvicellular reticular nuclei, medullary
nTPM: 520.0
2189 Female, age 91, both hemispheres 585.9
2091 Female, age 85, both hemispheres 489.4
2181 Male, age 80, left hemisphere 484.9
Pedunculopontine tegmental nucleus
nTPM: 550.1
2334 Male, age 80, both hemispheres 580.5
2338 Male, age 61, both hemispheres 565.2
1921 Female, age 85, both hemispheres 504.5
Peritrigeminal nucleus
nTPM: 615.5
2179 Male, age 61, both hemispheres 649.7
2136 Male, age 76, both hemispheres 643.1
2067 Female, age 85, both hemispheres 553.6
Pontine nuclei
nTPM: 601.4
2454 Male, age 74, left hemisphere 1042.4
2319 Female, age 91, both hemispheres 840.0
2109 Female, age 72, unknown 662.3
1863 Male, age 55, unknown 533.9
1968 Male, age 76, left hemisphere 524.7
2115 Male, age 80, left hemisphere 490.8
2727 Male, age 61, right hemisphere 361.5
2787 Female, age 85, both hemispheres 355.6
Pontine raphe nucleus
nTPM: 418.0
2853 Male, age 76, midline 449.1
2122 Female, age 85, midline 386.9
Posteroventral cochlear nucleus
nTPM: 689.1
2341 Male, age 80, both hemispheres 853.5
2135 Female, age 91, both hemispheres 831.0
2371 Male, age 61, both hemispheres 759.0
2070 Male, age 76, both hemispheres 547.9
2752 Female, age 85, both hemispheres 454.2
Prepositus hypoglossal nucleus
nTPM: 605.1
2855 Female, age 85, right hemisphere 790.3
2086 Male, age 80, both hemispheres 420.0
Principal sensory trigeminal nucleus
nTPM: 526.0
2367 Female, age 91, left hemisphere 838.1
2324 Male, age 76, both hemispheres 518.1
2158 Male, age 61, both hemispheres 395.7
2008 Male, age 80, left hemisphere 352.3
Reticular pontine nucleus, caudal
nTPM: 600.2
2559 Male, age 74, both hemispheres 746.2
2457 Female, age 91, both hemispheres 725.6
2092 Male, age 76, both hemispheres 529.5
2332 Male, age 80, right hemisphere 399.6
Reticular pontine nucleus, oral
nTPM: 789.5
2361 Male, age 74, both hemispheres 1024.4
2366 Female, age 91, both hemispheres 911.8
2167 Male, age 76, both hemispheres 751.3
1939 Male, age 80, both hemispheres 669.9
2012 Female, age 85, both hemispheres 589.8
Reticulotegmental nucleus
nTPM: 499.1
2322 Female, age 91, both hemispheres 643.0
2333 Male, age 80, both hemispheres 530.1
2452 Male, age 74, both hemispheres 490.4
2325 Male, age 76, both hemispheres 332.8
Spinal trigeminal nucleus, caudal
nTPM: 591.2
2312 Male, age 61, both hemispheres 842.3
2308 Male, age 80, both hemispheres 583.8
2390 Female, age 91, both hemispheres 565.2
2642 Male, age 74, both hemispheres 485.0
2447 Male, age 76, both hemispheres 479.6
Spinal trigeminal nucleus, interpolar
nTPM: 501.5
2389 Female, age 91, both hemispheres 569.9
2625 Male, age 61, both hemispheres 545.9
2033 Male, age 80, both hemispheres 512.0
2386 Female, age 85, both hemispheres 501.4
2066 Male, age 76, right hemisphere 378.2
Spinal trigeminal nucleus, oral
nTPM: 489.4
2164 Male, age 80, both hemispheres 549.8
1978 Male, age 76, both hemispheres 523.7
2737 Female, age 85, both hemispheres 394.6
Spinal vestibular nucleus
nTPM: 637.5
2806 Female, age 85, both hemispheres 826.6
2748 Male, age 76, both hemispheres 693.7
2796 Male, age 61, both hemispheres 674.5
2186 Female, age 91, both hemispheres 603.6
2384 Male, age 74, both hemispheres 526.1
2780 Male, age 80, both hemispheres 500.8
Subcoeruleus area
nTPM: 559.4
2369 Female, age 85, left hemisphere 945.7
1958 Male, age 80, both hemispheres 529.3
2089 Male, age 76, left hemisphere 474.2
2451 Male, age 74, both hemispheres 429.2
2323 Female, age 91, left hemisphere 418.8
Superior olive
nTPM: 620.7
2364 Male, age 74, right hemisphere 808.5
2020 Male, age 76, both hemispheres 654.9
2561 Female, age 91, both hemispheres 630.3
2329 Male, age 80, right hemisphere 544.3
1875 Female, age 85, both hemispheres 465.4
Superior vestibular nucleus
nTPM: 512.9
2015 Male, age 80, both hemispheres 563.5
2383 Male, age 74, both hemispheres 501.7
2061 Male, age 76, both hemispheres 473.6
Ventral medullary reticular nucleus
nTPM: 705.8
2372 Male, age 61, both hemispheres 868.3
2060 Male, age 76, both hemispheres 543.3
Ventral periolivary nuclei
nTPM: 521.8
2023 Male, age 76, both hemispheres 700.5
2794 Female, age 91, left hemisphere 489.2
2165 Male, age 80, both hemispheres 470.3
2130 Female, age 85, both hemispheres 427.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 645.1
2180 Male, age 61, both hemispheres 900.9
2118 Male, age 80, both hemispheres 675.2
2302 Female, age 91, both hemispheres 581.6
2741 Female, age 85, both hemispheres 537.7
1986 Male, age 76, both hemispheres 530.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 645.0
2840 Female, age 85, both hemispheres 802.4
2359 Male, age 61, both hemispheres 683.6
2456 Female, age 91, both hemispheres 673.5
2449 Male, age 74, both hemispheres 602.3
1959 Male, age 76, both hemispheres 583.2
2161 Male, age 80, both hemispheres 524.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2334.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1312.9
FF:10165-103B3 76 years, female 1375.1
FF:10182-103D2 60 years, female 1250.8
Medulla oblongata
Scaled Tags Per Million: 2334.7
FF:10038-101F2 18-64 years, mixed 2453.1
FF:10174-103C3 60 years, female 2442.7
FF:10155-103A2 76 years, female 2108.5
Pons
Scaled Tags Per Million: 1433.2
FF:10033-101E6 18-54 years, mixed 1433.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 2620.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2620.5
Samples: 4

Max nTPM: 3284.6
Min nTPM: 1510.3
Sample A Female 2640.8
Sample B Female 1510.3
Sample C Male 3046.2
Sample D Male 3284.6
Pons
nTPM: 1282.4
Samples: 4

Max nTPM: 2509.6
Min nTPM: 686.6
Sample A Female 686.6
Sample B Female 694.8
Sample C Male 1238.5
Sample D Male 2509.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 434.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 434.2
Samples: 4

Max nTPM: 462.3
Min nTPM: 419.8
Sample A Male 419.8
Sample B Male 426.5
Sample C Female 428.3
Sample D Female 462.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 15.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 15.1
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 15.1
Pons
Expression energy: 14.7
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 14.7

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