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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:75.1 nTPM
HPA Brain:390.8 nTPM
GTEx:75.1 nTPM
FANTOM5:687.9 Scaled Tags Per Million
Pig:199.1 nTPM
Mouse:217.3 nTPM
Allen mouse:17.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007927Antibody CAB004581
Glial cells Not detectedLow
Neuronal cells LowLow



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

390.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 302.7
2481 Female, age 94, left hemisphere 353.2
1781 Male, age 74, unknown 320.3
2289 Male, age 61, right hemisphere 315.4
1857 Female, age 85, left hemisphere 313.8
1854 Male, age 80, left hemisphere 301.7
2290 Female, age 72, unknown 295.1
2288 Male, age 75, left hemisphere 284.7
2846 Female, age 79, unknown 236.9
Globus pallidus, externus
nTPM: 250.6
2772 Female, age 79, unknown 306.3
2395 Male, age 75, both hemispheres 273.9
2646 Male, age 61, right hemisphere 256.6
1996 Male, age 80, right hemisphere 215.6
2567 Female, age 72, unknown 200.7
Globus pallidus, internus
nTPM: 226.1
2483 Female, age 94, right hemisphere 316.5
1818 Male, age 74, unknown 271.9
2287 Male, age 75, right hemisphere 270.7
2037 Male, age 80, right hemisphere 201.6
2566 Female, age 72, unknown 193.4
2778 Female, age 91, both hemispheres 176.6
2111 Female, age 85, right hemisphere 152.0
Nucleus accumbens
nTPM: 294.6
1856 Female, age 91, right hemisphere 397.9
2824 Male, age 61, right hemisphere 372.9
1783 Male, age 74, unknown 304.0
1806 Female, age 85, left hemisphere 288.1
2286 Male, age 75, left hemisphere 278.6
2698 Female, age 72, unknown 243.0
2391 Female, age 94, left hemisphere 239.8
2732 Male, age 80, right hemisphere 232.8
Nucleus basalis of Meynert
nTPM: 291.0
2484 Female, age 94, left hemisphere 339.9
2569 Male, age 61, both hemispheres 284.5
2393 Male, age 80, right hemisphere 282.3
2821 Male, age 75, both hemispheres 257.2
Nucleus of the diagonal band
nTPM: 390.8
1812 Female, age 91, both hemispheres 445.3
2029 Male, age 61, right hemisphere 432.2
2775 Male, age 80, right hemisphere 426.7
2195 Female, age 85, both hemispheres 360.7
1979 Male, age 74, unknown 289.0
Putamen
nTPM: 288.7
1937 Female, age 91, right hemisphere 324.6
2647 Male, age 75, left hemisphere 311.0
1838 Male, age 80, right hemisphere 307.5
1829 Male, age 74, unknown 286.8
2482 Female, age 94, left hemisphere 278.4
2466 Female, age 79, unknown 273.3
2489 Female, age 72, unknown 239.6
Septal nuclei
nTPM: 348.4
2009 Female, age 91, both hemispheres 418.7
2031 Female, age 72, unknown 408.3
1960 Male, age 74, unknown 399.5
2629 Female, age 94, right hemisphere 346.8
2059 Female, age 85, both hemispheres 320.4
2199 Male, age 80, right hemisphere 277.3
2394 Male, age 61, left hemisphere 267.8
Stria terminalis, bed nucleus
nTPM: 370.4
1974 Female, age 91, both hemispheres 437.6
2486 Female, age 94, both hemispheres 387.4
2201 Male, age 74, unknown 286.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 71.7
Samples: 246

Max nTPM: 148.4
Min nTPM: 31.0
Std nTPM: 19.8
Median nTPM: 69.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 148.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 131.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 119.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 117.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 115.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 110.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 110.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 108.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 106.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 106.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 105.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 104.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 103.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 102.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 100.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 100.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 100.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 99.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 98.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 98.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 98.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 98.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 97.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 97.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 96.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 96.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 96.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 95.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 92.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 92.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 92.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 92.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 92.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 91.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 90.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 90.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 89.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 89.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 89.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 89.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 88.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 88.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 87.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 86.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 85.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 85.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 85.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 84.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 84.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 84.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 83.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 83.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 82.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 81.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 81.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 81.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 81.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 80.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 80.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 80.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 80.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 80.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 80.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 80.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 80.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 77.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 77.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 77.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 77.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 77.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 77.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 76.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 76.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 76.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 75.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 75.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 75.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 74.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 73.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 73.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 72.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 72.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 72.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 71.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 71.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 70.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 70.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 69.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 69.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 68.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 68.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 67.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 67.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 67.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 67.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 66.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 65.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 65.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 64.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 64.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 63.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 63.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 62.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 62.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 61.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 61.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 61.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 60.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 60.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 59.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 58.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 58.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 58.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 58.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 57.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 57.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 57.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 56.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 56.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 55.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 55.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 55.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 55.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 54.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 54.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 54.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 52.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 52.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 52.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 52.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 52.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 51.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 51.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 51.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 50.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 50.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 49.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 47.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 47.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 47.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 47.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 47.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 46.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 46.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 45.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 44.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 43.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 42.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 38.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 36.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 34.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 31.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 75.1
Samples: 246

Max nTPM: 151.2
Min nTPM: 15.7
Std nTPM: 25.0
Median nTPM: 74.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 151.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 138.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 138.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 125.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 123.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 123.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 123.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 122.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 121.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 120.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 119.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 119.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 118.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 117.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 116.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 115.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 115.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 115.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 114.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 112.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 111.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 110.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 110.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 108.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 108.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 108.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 106.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 105.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 104.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 104.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 104.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 104.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 103.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 102.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 102.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 102.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 102.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 102.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 101.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 101.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 99.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 99.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 98.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 97.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 97.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 96.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 96.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 96.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 96.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 96.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 96.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 95.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 95.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 94.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 94.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 93.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 93.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 92.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 92.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 92.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 92.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 92.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 91.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 90.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 89.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 89.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 89.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 88.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 88.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 87.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 87.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 87.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 87.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 87.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 86.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 86.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 85.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 85.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 85.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 85.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 85.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 85.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 85.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 84.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 84.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 84.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 84.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 84.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 84.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 84.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 83.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 82.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 82.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 81.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 81.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 81.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 80.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 80.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 80.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 79.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 79.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 78.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 78.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 77.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 77.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 76.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 76.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 75.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 75.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 75.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 75.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 74.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 74.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 73.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 73.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 73.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 72.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 72.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 72.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 72.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 72.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 71.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 71.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 71.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 71.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 71.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 70.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 70.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 70.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 70.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 70.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 69.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 69.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 69.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 69.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 69.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 66.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 65.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 65.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 64.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 64.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 63.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 62.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 61.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 61.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 60.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 60.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 60.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 59.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 59.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 59.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 59.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 58.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 58.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 57.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 56.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 56.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 56.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 55.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 55.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 55.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 54.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 52.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 52.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 52.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 52.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 52.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 51.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 51.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 50.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 50.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 50.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 50.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 50.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 50.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 50.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 49.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 49.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 49.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 48.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 48.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 47.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 47.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 47.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 45.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 45.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 45.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 44.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 43.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 43.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 42.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 41.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 41.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 41.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 40.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 40.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 39.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 38.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 38.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 37.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 36.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 35.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 34.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 34.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 33.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 30.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 26.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.7
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Brain - Putamen (basal ganglia)
Average nTPM: 61.5
Samples: 205

Max nTPM: 106.4
Min nTPM: 27.1
Std nTPM: 16.4
Median nTPM: 59.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 106.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 104.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 97.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 94.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 93.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 92.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 91.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 91.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 90.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 90.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 90.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 88.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 88.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 87.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 86.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 86.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 86.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 85.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 84.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 84.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 84.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 82.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 81.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 81.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 80.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 79.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 79.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 79.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 78.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 77.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 76.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 76.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 75.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 75.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 75.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 74.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 74.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 74.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 74.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 73.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 73.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 72.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 72.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 71.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 71.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 71.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 70.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 70.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 70.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 70.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 70.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 70.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 70.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 69.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 69.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 68.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 68.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 68.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 67.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 67.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 66.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 66.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 66.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 65.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 65.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 64.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 63.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 63.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 62.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 62.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 62.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 61.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 61.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 61.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 60.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 60.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 60.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 60.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 60.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 60.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 59.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 59.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 59.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 58.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 58.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 58.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 57.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 57.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 56.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 56.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 56.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 56.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 56.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 55.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 55.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 55.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 55.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 53.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 53.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 53.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 52.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 52.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 52.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 52.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 51.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 51.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 50.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 50.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 49.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 49.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 49.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 49.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 49.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 49.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 48.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 47.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 47.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 47.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 47.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 46.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 46.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 46.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 45.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 45.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 45.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 44.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 44.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 43.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 43.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 42.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 42.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 42.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 42.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 41.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 41.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 40.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 40.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 39.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 39.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 39.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 37.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 37.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 37.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 35.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 35.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 35.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 31.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 30.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 29.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 27.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

687.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 511.1
FF:10164-103B2 76 years, female 511.1
Nucleus accumbens
Scaled Tags Per Million: 687.9
FF:10037-101F1 23-56 years, mixed 687.9
Putamen
Scaled Tags Per Million: 623.2
FF:10176-103C5 60 years, female 623.2
Globus pallidus
Scaled Tags Per Million: 352.5
FF:10175-103C4 60 years, female 401.0
FF:10161-103A8 76 years, female 304.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.1
Pig sample Sample description nTPM
Caudate
nTPM: 199.1
Samples: 4

Max nTPM: 245.2
Min nTPM: 160.7
Sample A Female 160.7
Sample B Female 195.9
Sample C Male 245.2
Sample D Male 194.4
Putamen
nTPM: 197.7
Samples: 4

Max nTPM: 281.9
Min nTPM: 127.5
Sample A Female 127.5
Sample B Female 174.2
Sample C Male 281.9
Sample D Male 207.0
Septum
nTPM: 173.6
Samples: 4

Max nTPM: 216.4
Min nTPM: 136.3
Sample A Female 172.8
Sample B Female 168.7
Sample C Male 216.4
Sample D Male 136.3
Ventral pallidum
nTPM: 193.8
Samples: 4

Max nTPM: 269.6
Min nTPM: 152.0
Sample A Female 183.6
Sample B Female 169.8
Sample C Male 269.6
Sample D Male 152.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 211.0
Samples: 4

Max nTPM: 215.1
Min nTPM: 205.2
Sample A Male 205.2
Sample B Male 209.2
Sample C Female 215.1
Sample D Female 214.4
Septum
nTPM: 173.4
Samples: 4

Max nTPM: 198.3
Min nTPM: 158.1
Sample A Male 198.3
Sample B Male 159.0
Sample C Female 158.1
Sample D Female 178.1
Ventral forebrain
nTPM: 217.4
Samples: 4

Max nTPM: 236.5
Min nTPM: 197.3
Sample A Male 212.4
Sample B Male 223.2
Sample C Female 197.3
Sample D Female 236.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.8
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 20.2
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 15.4
Pallidum
Expression energy: 16.0
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 18.4
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 13.6

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