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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
103.8
nTPM
GTEx:
103.8
nTPM
FANTOM5:
351.1
Scaled Tags Per Million
Pig:
243.6
nTPM
Mouse:
170.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
103.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 103.8
Samples: 105
Max nTPM: 174.0
Min nTPM: 22.5
Std nTPM: 27.0
Median nTPM:
163_1
78 years, male
174.0
177_1
74 years, male
165.9
172_1
72 years, female
160.1
318_1
68 years, male
148.5
506_1
65 years, male
143.5
243_1
75 years, male
139.3
353_1
82 years, female
137.4
319_1
81 years, male
136.6
355_1
70 years, female
135.1
425_1
59 years, female
133.7
386_1
76 years, male
132.6
292_1
71 years, male
132.0
335_1
73 years, female
132.0
349_1
83 years, male
131.7
291_1
76 years, male
129.1
356_1
87 years, female
128.1
351_1
91 years, male
127.9
406_1
79 years, male
127.5
376_1
75 years, female
126.9
316_1
62 years, male
126.5
352_1
62 years, male
126.1
321_1
62 years, female
126.0
286_1
68 years, female
125.8
404_1
82 years, female
125.4
237_1
82 years, male
124.8
6_1
73 years, female
123.8
322_1
76 years, male
123.8
503_1
68 years, male
123.3
350_1
84 years, female
122.1
377_1
82 years, female
121.5
295_1
61 years, female
120.8
452_1
88 years, female
120.8
348_1
84 years, male
120.5
320_1
89 years, female
119.8
189_1
76 years, male
119.3
115_1
83 years, male
118.3
394_1
75 years, female
118.2
517_1
88 years, male
117.8
405_1
91 years, male
117.5
229_1
69 years, female
117.4
251_1
78 years, male
117.2
293_1
68 years, female
115.8
264_1
73 years, female
115.4
173_1
67 years, male
114.4
447_1
81 years, male
112.7
480_1
63 years, male
111.3
317_1
60 years, male
110.1
18_1
88 years, male
109.3
384_1
83 years, male
108.9
99_1
64 years, male
108.2
354_1
81 years, female
107.7
379_1
60 years, male
106.8
375_1
74 years, female
106.5
109_1
81 years, female
106.1
246_1
77 years, male
105.5
218_1
71 years, female
103.2
396_1
62 years, male
100.6
518_1
75 years, female
99.7
145_1
84 years, male
99.5
254_1
77 years, female
99.3
35_1
74 years, female
98.8
153_1
70 years, female
98.3
314_1
67 years, male
98.0
120_1
70 years, female
97.8
126_1
63 years, male
96.2
324_1
76 years, male
95.8
2_1
77 years, female
95.7
288_1
66 years, female
95.4
265_1
87 years, male
94.3
347_1
72 years, male
94.3
4_1
88 years, female
93.8
526_1
61 years, male
93.6
499_1
55 years, female
92.7
468_1
89 years, male
92.1
9_1
66 years, female
90.9
311_1
78 years, male
90.5
81_1
67 years, male
90.4
41_1
94 years, female
90.0
266_1
85 years, male
89.2
17_1
71 years, male
88.5
137_1
83 years, male
84.0
389_1
86 years, female
83.1
313_1
79 years, female
81.8
139_1
64 years, female
80.9
42_1
85 years, male
79.7
217_1
76 years, male
78.4
307_1
66 years, female
77.9
43_1
64 years, female
76.9
142_1
61 years, female
75.7
117_1
61 years, male
74.6
32_1
67 years, male
73.6
414_1
84 years, female
70.9
315_1
62 years, female
68.2
162_1
79 years, female
67.3
119_1
70 years, female
66.6
501_1
88 years, male
65.1
466_1
57 years, female
64.2
89_1
63 years, male
62.4
415_1
77 years, female
61.2
495_1
57 years, female
61.1
149_1
88 years, male
58.1
413_1
59 years, female
54.2
308_1
70 years, female
50.0
490_1
67 years, female
30.5
491_1
89 years, female
22.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
