PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:525.1 nTPM
FANTOM5:977.8 Scaled Tags Per Million
Pig:252.1 nTPM
Mouse:107.1 nTPM
Allen mouse:13.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 525.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 295.1
1984 Male, age 76, both hemispheres 339.1
2301 Female, age 85, both hemispheres 295.3
2188 Female, age 91, both hemispheres 275.5
2090 Male, age 80, both hemispheres 270.6
Area postrema
nTPM: 271.7
2799 Male, age 61, both hemispheres 285.9
2054 Male, age 76, both hemispheres 266.1
2306 Male, age 80, both hemispheres 263.1
Dorsal cochlear nucleus
nTPM: 291.7
2802 Male, age 74, right hemisphere 397.5
2187 Female, age 91, both hemispheres 294.1
2058 Male, age 76, both hemispheres 281.1
2378 Male, age 80, both hemispheres 256.9
2370 Male, age 61, both hemispheres 228.9
Dorsal medullary reticular nucleus
nTPM: 301.6
2040 Female, age 85, both hemispheres 382.7
2088 Male, age 76, both hemispheres 269.3
2373 Male, age 61, both hemispheres 252.8
Dorsal motor vagal complex
nTPM: 333.5
2643 Male, age 74, both hemispheres 431.9
2133 Female, age 91, both hemispheres 418.5
2000 Male, age 74, unknown 407.1
2844 Male, age 55, unknown 349.1
2813 Female, age 72, unknown 314.9
2797 Male, age 61, both hemispheres 281.9
2807 Female, age 85, both hemispheres 237.6
2185 Male, age 76, both hemispheres 227.1
Dorsal tegmental nucleus
nTPM: 269.3
2083 Male, age 80, both hemispheres 313.5
2326 Male, age 74, both hemispheres 295.3
1936 Male, age 76, left hemisphere 264.1
2358 Male, age 61, both hemispheres 204.1
Dorsolateral tegmental area
nTPM: 255.9
2360 Male, age 74, both hemispheres 302.3
2654 Male, age 80, both hemispheres 293.8
2141 Male, age 76, both hemispheres 289.1
2751 Female, age 85, both hemispheres 223.5
2337 Male, age 61, both hemispheres 171.0
Gigantocellular reticular nuclei, medullary
nTPM: 317.4
2462 Male, age 74, both hemispheres 495.1
2310 Male, age 80, both hemispheres 311.3
2022 Male, age 76, right hemisphere 307.8
1876 Female, age 85, both hemispheres 272.1
2387 Female, age 91, both hemispheres 261.8
2314 Male, age 61, both hemispheres 256.2
Gigantocellular reticular nuclei, pars
nTPM: 373.4
2168 Male, age 76, both hemispheres 572.3
2084 Female, age 85, both hemispheres 369.8
2330 Male, age 80, both hemispheres 340.1
2706 Male, age 80, both hemispheres 322.7
2336 Male, age 61, both hemispheres 262.1
Inferior olive
nTPM: 335.5
2563 Male, age 74, both hemispheres 472.1
2085 Female, age 85, both hemispheres 341.6
2628 Female, age 91, both hemispheres 324.2
2178 Male, age 61, both hemispheres 270.5
2379 Male, age 80, both hemispheres 269.2
Kolliker-Fuse nucleus
nTPM: 336.0
2163 Male, age 80, both hemispheres 430.4
2315 Male, age 76, right hemisphere 310.7
2793 Female, age 91, left hemisphere 266.8
Lateral lemniscal nuclei
nTPM: 410.0
2169 Male, age 76, both hemispheres 561.0
2746 Female, age 85, left hemisphere 458.6
2453 Male, age 74, right hemisphere 392.4
2036 Male, age 80, both hemispheres 362.0
2320 Female, age 91, left hemisphere 275.8
Lateral medullary reticular nucleus
nTPM: 314.6
2804 Female, age 91, both hemispheres 373.1
2044 Male, age 76, both hemispheres 372.2
2305 Male, age 74, both hemispheres 340.6
2190 Female, age 85, both hemispheres 282.0
2852 Male, age 80, both hemispheres 264.3
2374 Male, age 61, both hemispheres 255.5
Lateral parabrachial nucleus
nTPM: 337.9
2139 Female, age 85, right hemisphere 569.3
2013 Male, age 80, both hemispheres 351.1
2790 Male, age 61, both hemispheres 228.0
2792 Male, age 76, both hemispheres 203.5
Lateral vestibular nucleus
nTPM: 339.9
2184 Male, age 76, both hemispheres 401.8
2311 Male, age 80, both hemispheres 278.0
Locus coeruleus
nTPM: 352.8
2123 Female, age 91, both hemispheres 440.7
2014 Male, age 55, unknown 401.1
2317 Female, age 72, unknown 357.5
2788 Male, age 74, unknown 352.8
1980 Male, age 76, both hemispheres 317.5
2162 Male, age 80, both hemispheres 308.6
2720 Male, age 74, both hemispheres 291.5
Medial olivary nucleus
nTPM: 279.6
2138 Female, age 91, both hemispheres 402.6
2851 Male, age 80, both hemispheres 284.0
1943 Male, age 61, both hemispheres 236.7
1962 Male, age 76, both hemispheres 195.2
Medial parabrachial nucleus
nTPM: 279.8
2854 Male, age 80, both hemispheres 339.6
2156 Male, age 61, both hemispheres 281.7
2786 Male, age 76, both hemispheres 268.5
2170 Female, age 91, both hemispheres 261.9
2463 Female, age 85, right hemisphere 247.5
Medial periolivary nuclei
nTPM: 447.4
2171 Female, age 85, both hemispheres 653.7
2063 Male, age 76, both hemispheres 597.1
2791 Male, age 74, right hemisphere 380.5
2081 Male, age 80, both hemispheres 326.6
2458 Female, age 91, both hemispheres 279.2
Medial vestibular nucleus
nTPM: 359.6
2134 Male, age 76, both hemispheres 419.0
2093 Male, age 80, both hemispheres 395.8
2743 Female, age 85, both hemispheres 372.8
2803 Female, age 91, both hemispheres 331.1
2801 Male, age 74, both hemispheres 325.7
2624 Male, age 61, both hemispheres 313.2
Motor facial nucleus
nTPM: 409.4
2062 Male, age 76, both hemispheres 615.2
2327 Male, age 80, both hemispheres 393.9
2365 Male, age 74, right hemisphere 389.4
2795 Female, age 91, both hemispheres 373.2
2697 Female, age 85, both hemispheres 366.4
2126 Male, age 61, both hemispheres 318.6
Motor hypoglossal nucleus
nTPM: 317.8
2125 Female, age 91, both hemispheres 381.3
2132 Female, age 85, both hemispheres 347.7
2461 Male, age 61, both hemispheres 343.7
2277 Male, age 76, both hemispheres 264.4
2182 Male, age 80, both hemispheres 251.8
Motor trigeminal nucleus
nTPM: 311.0
2079 Male, age 80, both hemispheres 454.5
2560 Male, age 74, both hemispheres 299.4
2335 Male, age 61, both hemispheres 276.4
2309 Male, age 76, both hemispheres 272.5
2321 Female, age 91, both hemispheres 252.5
Nuclei of the trapezoid body
nTPM: 525.1
2159 Male, age 61, both hemispheres 646.3
2735 Female, age 85, both hemispheres 642.7
1983 Male, age 76, both hemispheres 586.2
2166 Male, age 80, both hemispheres 396.3
2368 Female, age 91, both hemispheres 354.2
Nucleus ambiguus
nTPM: 310.8
2096 Female, age 85, both hemispheres 410.5
2071 Male, age 76, both hemispheres 211.2
Nucleus cuneatus
nTPM: 273.6
2131 Male, age 76, both hemispheres 387.7
2564 Male, age 74, both hemispheres 369.0
2100 Male, age 76, both hemispheres 333.6
2562 Male, age 61, both hemispheres 258.3
2805 Female, age 91, both hemispheres 241.1
2376 Male, age 61, both hemispheres 233.0
2381 Male, age 80, both hemispheres 214.0
2380 Male, age 80, both hemispheres 213.5
2808 Female, age 85, both hemispheres 211.9
Nucleus gracilis
nTPM: 244.5
2627 Male, age 74, both hemispheres 349.6
2299 Female, age 85, both hemispheres 198.7
2382 Male, age 80, both hemispheres 185.3
Nucleus raphe magnus
nTPM: 499.4
2160 Male, age 61, both hemispheres 752.8
2172 Female, age 85, both hemispheres 650.3
2455 Male, age 74, both hemispheres 458.6
2328 Male, age 80, both hemispheres 413.5
2051 Male, age 76, both hemispheres 413.1
2459 Female, age 91, both hemispheres 308.0
Nucleus raphe obscurus
nTPM: 239.7
2800 Male, age 61, midline 284.4
2845 Female, age 85, midline 267.3
2142 Male, age 76, midline 167.2
Nucleus raphe pallidus
nTPM: 276.4
1924 Male, age 61, midline 338.6
2183 Male, age 80, midline 313.2
2145 Male, age 76, midline 177.4
Nucleus tractus solitarii
nTPM: 331.8
2144 Female, age 91, right hemisphere 441.1
2191 Female, age 85, both hemispheres 333.6
2656 Male, age 76, both hemispheres 290.7
2307 Male, age 80, both hemispheres 262.0
Paramedian reticular nucleus
nTPM: 342.7
2050 Female, age 85, both hemispheres 440.7
2057 Male, age 80, both hemispheres 375.8
2313 Male, age 61, both hemispheres 325.4
2052 Male, age 76, both hemispheres 229.0
Parvicellular reticular nuclei
nTPM: 349.4
2558 Male, age 74, both hemispheres 359.1
2119 Male, age 80, both hemispheres 351.5
2095 Male, age 76, both hemispheres 337.5
Parvicellular reticular nuclei, medullary
nTPM: 355.7
2091 Female, age 85, both hemispheres 390.1
2189 Female, age 91, both hemispheres 371.3
2181 Male, age 80, left hemisphere 305.8
Pedunculopontine tegmental nucleus
nTPM: 259.7
1921 Female, age 85, both hemispheres 289.1
2334 Male, age 80, both hemispheres 255.5
2338 Male, age 61, both hemispheres 234.5
Peritrigeminal nucleus
nTPM: 371.3
2067 Female, age 85, both hemispheres 392.8
2179 Male, age 61, both hemispheres 365.5
2136 Male, age 76, both hemispheres 355.7
Pontine nuclei
nTPM: 494.6
2787 Female, age 85, both hemispheres 710.2
1863 Male, age 55, unknown 684.1
2727 Male, age 61, right hemisphere 660.9
2109 Female, age 72, unknown 528.2
1968 Male, age 76, left hemisphere 508.6
2115 Male, age 80, left hemisphere 353.2
2319 Female, age 91, both hemispheres 257.2
2454 Male, age 74, left hemisphere 254.3
Pontine raphe nucleus
nTPM: 385.2
2122 Female, age 85, midline 499.8
2853 Male, age 76, midline 270.6
Posteroventral cochlear nucleus
nTPM: 262.1
2752 Female, age 85, both hemispheres 362.6
2070 Male, age 76, both hemispheres 306.1
2341 Male, age 80, both hemispheres 238.3
2371 Male, age 61, both hemispheres 224.9
2135 Female, age 91, both hemispheres 178.4
Prepositus hypoglossal nucleus
nTPM: 340.9
2855 Female, age 85, right hemisphere 358.3
2086 Male, age 80, both hemispheres 323.4
Principal sensory trigeminal nucleus
nTPM: 434.3
2158 Male, age 61, both hemispheres 637.0
2008 Male, age 80, left hemisphere 508.8
2324 Male, age 76, both hemispheres 342.1
2367 Female, age 91, left hemisphere 249.4
Reticular pontine nucleus, caudal
nTPM: 353.9
2092 Male, age 76, both hemispheres 446.8
2332 Male, age 80, right hemisphere 444.6
2457 Female, age 91, both hemispheres 281.8
2559 Male, age 74, both hemispheres 242.3
Reticular pontine nucleus, oral
nTPM: 293.4
2012 Female, age 85, both hemispheres 401.7
2361 Male, age 74, both hemispheres 295.7
1939 Male, age 80, both hemispheres 263.4
2167 Male, age 76, both hemispheres 258.9
2366 Female, age 91, both hemispheres 247.4
Reticulotegmental nucleus
nTPM: 331.1
2325 Male, age 76, both hemispheres 391.4
2322 Female, age 91, both hemispheres 318.9
2333 Male, age 80, both hemispheres 314.0
2452 Male, age 74, both hemispheres 300.2
Spinal trigeminal nucleus, caudal
nTPM: 328.6
2390 Female, age 91, both hemispheres 502.5
2447 Male, age 76, both hemispheres 340.2
2642 Male, age 74, both hemispheres 300.0
2308 Male, age 80, both hemispheres 276.5
2312 Male, age 61, both hemispheres 223.7
Spinal trigeminal nucleus, interpolar
nTPM: 403.5
2625 Male, age 61, both hemispheres 589.3
2066 Male, age 76, right hemisphere 475.1
2389 Female, age 91, both hemispheres 351.9
2033 Male, age 80, both hemispheres 320.6
2386 Female, age 85, both hemispheres 280.7
Spinal trigeminal nucleus, oral
nTPM: 339.6
2164 Male, age 80, both hemispheres 384.0
2737 Female, age 85, both hemispheres 349.9
1978 Male, age 76, both hemispheres 284.9
Spinal vestibular nucleus
nTPM: 307.7
2186 Female, age 91, both hemispheres 367.8
2780 Male, age 80, both hemispheres 346.5
2806 Female, age 85, both hemispheres 296.5
2748 Male, age 76, both hemispheres 289.6
2384 Male, age 74, both hemispheres 285.4
2796 Male, age 61, both hemispheres 260.3
Subcoeruleus area
nTPM: 320.7
2089 Male, age 76, left hemisphere 431.1
1958 Male, age 80, both hemispheres 382.3
2323 Female, age 91, left hemisphere 320.3
2451 Male, age 74, both hemispheres 278.2
2369 Female, age 85, left hemisphere 191.5
Superior olive
nTPM: 396.5
1875 Female, age 85, both hemispheres 540.0
2020 Male, age 76, both hemispheres 416.2
2329 Male, age 80, right hemisphere 361.5
2364 Male, age 74, right hemisphere 341.5
2561 Female, age 91, both hemispheres 323.1
Superior vestibular nucleus
nTPM: 330.5
2383 Male, age 74, both hemispheres 369.4
2015 Male, age 80, both hemispheres 331.7
2061 Male, age 76, both hemispheres 290.4
Ventral medullary reticular nucleus
nTPM: 272.0
2060 Male, age 76, both hemispheres 287.8
2372 Male, age 61, both hemispheres 256.1
Ventral periolivary nuclei
nTPM: 472.3
2130 Female, age 85, both hemispheres 612.2
2165 Male, age 80, both hemispheres 541.2
2023 Male, age 76, both hemispheres 375.1
2794 Female, age 91, left hemisphere 360.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 335.3
2302 Female, age 91, both hemispheres 381.0
2741 Female, age 85, both hemispheres 379.6
1986 Male, age 76, both hemispheres 361.1
2180 Male, age 61, both hemispheres 291.8
2118 Male, age 80, both hemispheres 263.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 341.7
1959 Male, age 76, both hemispheres 427.3
2449 Male, age 74, both hemispheres 383.2
2161 Male, age 80, both hemispheres 377.3
2840 Female, age 85, both hemispheres 352.2
2456 Female, age 91, both hemispheres 278.1
2359 Male, age 61, both hemispheres 232.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 977.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 543.3
FF:10182-103D2 60 years, female 704.5
FF:10165-103B3 76 years, female 382.0
Medulla oblongata
Scaled Tags Per Million: 541.3
FF:10038-101F2 18-64 years, mixed 712.4
FF:10174-103C3 60 years, female 464.1
FF:10155-103A2 76 years, female 447.5
Pons
Scaled Tags Per Million: 977.8
FF:10033-101E6 18-54 years, mixed 977.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 252.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 190.9
Samples: 4

Max nTPM: 221.3
Min nTPM: 122.0
Sample A Female 206.5
Sample B Female 221.3
Sample C Male 213.8
Sample D Male 122.0
Pons
nTPM: 252.1
Samples: 4

Max nTPM: 355.8
Min nTPM: 198.1
Sample A Female 355.8
Sample B Female 198.1
Sample C Male 216.7
Sample D Male 237.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 107.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 107.1
Samples: 4

Max nTPM: 117.9
Min nTPM: 98.8
Sample A Male 117.9
Sample B Male 106.7
Sample C Female 98.8
Sample D Female 105.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.8
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 17.5
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 10.2
Pons
Expression energy: 13.1
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 16.2
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 10.0

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