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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:653.4 nTPM
HPA Brain:297.4 nTPM
GTEx:653.4 nTPM
FANTOM5:12.7 Scaled Tags Per Million
Mouse:9.4 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003403
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 229.4
2846 Female, age 79, unknown 294.5
1781 Male, age 74, unknown 248.2
1857 Female, age 85, left hemisphere 243.3
2290 Female, age 72, unknown 239.2
1854 Male, age 80, left hemisphere 235.7
2481 Female, age 94, left hemisphere 208.2
2288 Male, age 75, left hemisphere 192.6
2289 Male, age 61, right hemisphere 173.2
Globus pallidus, externus
nTPM: 295.1
1996 Male, age 80, right hemisphere 354.7
2772 Female, age 79, unknown 342.5
2395 Male, age 75, both hemispheres 315.7
2646 Male, age 61, right hemisphere 234.7
2567 Female, age 72, unknown 227.9
Globus pallidus, internus
nTPM: 297.4
2287 Male, age 75, right hemisphere 339.8
2037 Male, age 80, right hemisphere 337.4
2483 Female, age 94, right hemisphere 307.1
2778 Female, age 91, both hemispheres 282.8
1818 Male, age 74, unknown 273.7
2111 Female, age 85, right hemisphere 273.3
2566 Female, age 72, unknown 267.4
Nucleus accumbens
nTPM: 241.4
2698 Female, age 72, unknown 344.9
2391 Female, age 94, left hemisphere 263.3
1856 Female, age 91, right hemisphere 249.8
1806 Female, age 85, left hemisphere 246.9
2732 Male, age 80, right hemisphere 242.5
1783 Male, age 74, unknown 226.7
2286 Male, age 75, left hemisphere 191.3
2824 Male, age 61, right hemisphere 165.7
Nucleus basalis of Meynert
nTPM: 250.7
2821 Male, age 75, both hemispheres 291.5
2569 Male, age 61, both hemispheres 257.5
2393 Male, age 80, right hemisphere 228.3
2484 Female, age 94, left hemisphere 225.7
Nucleus of the diagonal band
nTPM: 214.9
1812 Female, age 91, both hemispheres 262.4
1979 Male, age 74, unknown 222.9
2775 Male, age 80, right hemisphere 207.7
2195 Female, age 85, both hemispheres 198.6
2029 Male, age 61, right hemisphere 183.0
Putamen
nTPM: 202.8
2482 Female, age 94, left hemisphere 243.6
1937 Female, age 91, right hemisphere 214.7
1838 Male, age 80, right hemisphere 211.7
2466 Female, age 79, unknown 203.8
2489 Female, age 72, unknown 190.7
1829 Male, age 74, unknown 186.1
2647 Male, age 75, left hemisphere 169.3
Septal nuclei
nTPM: 220.1
2199 Male, age 80, right hemisphere 261.5
2031 Female, age 72, unknown 252.5
2629 Female, age 94, right hemisphere 219.5
2394 Male, age 61, left hemisphere 206.7
2009 Female, age 91, both hemispheres 205.4
1960 Male, age 74, unknown 202.2
2059 Female, age 85, both hemispheres 192.9
Stria terminalis, bed nucleus
nTPM: 182.1
1974 Female, age 91, both hemispheres 213.4
2201 Male, age 74, unknown 181.6
2486 Female, age 94, both hemispheres 151.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

653.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 536.9
Samples: 246

Max nTPM: 1350.8
Min nTPM: 264.0
Std nTPM: 162.8
Median nTPM: 509.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1350.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1165.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1142.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1087.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1078.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1012.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 998.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 967.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 963.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 915.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 842.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 808.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 797.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 792.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 788.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 786.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 782.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 781.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 772.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 766.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 752.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 741.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 735.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 731.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 719.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 715.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 713.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 703.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 699.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 698.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 698.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 693.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 687.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 686.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 683.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 682.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 678.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 677.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 676.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 670.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 665.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 660.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 652.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 648.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 647.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 646.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 644.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 638.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 635.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 633.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 627.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 623.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 622.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 614.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 609.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 606.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 605.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 605.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 603.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 600.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 600.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 596.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 596.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 595.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 595.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 592.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 591.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 589.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 589.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 588.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 585.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 585.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 584.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 584.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 584.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 583.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 579.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 579.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 575.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 575.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 572.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 570.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 565.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 565.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 564.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 564.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 557.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 557.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 556.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 556.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 555.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 554.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 553.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 553.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 552.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 552.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 551.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 551.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 546.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 544.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 541.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 537.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 537.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 537.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 536.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 535.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 532.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 531.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 530.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 529.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 525.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 525.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 525.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 523.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 522.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 522.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 521.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 521.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 519.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 518.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 512.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 512.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 509.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 509.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 503.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 502.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 500.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 499.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 498.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 498.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 496.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 496.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 496.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 495.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 495.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 493.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 493.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 492.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 492.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 492.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 491.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 490.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 489.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 489.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 486.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 485.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 482.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 481.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 481.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 479.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 477.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 475.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 475.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 471.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 470.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 469.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 465.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 465.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 464.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 462.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 462.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 461.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 461.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 459.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 458.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 458.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 458.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 458.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 453.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 452.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 450.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 450.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 448.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 448.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 447.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 447.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 446.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 444.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 444.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 443.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 439.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 439.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 435.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 434.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 432.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 430.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 427.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 426.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 426.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 425.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 424.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 423.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 423.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 416.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 415.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 411.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 410.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 410.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 406.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 404.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 403.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 402.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 400.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 400.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 400.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 398.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 392.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 391.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 390.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 383.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 383.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 383.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 380.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 373.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 370.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 368.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 368.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 365.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 365.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 362.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 361.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 361.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 361.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 360.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 360.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 356.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 354.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 350.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 350.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 350.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 349.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 347.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 347.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 341.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 337.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 332.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 325.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 324.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 316.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 307.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 305.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 304.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 301.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 264.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 264.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 653.4
Samples: 246

Max nTPM: 2196.0
Min nTPM: 315.9
Std nTPM: 243.0
Median nTPM: 609.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2196.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2087.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1789.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1434.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1296.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1143.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1121.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1104.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1098.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1068.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1068.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1043.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1041.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1034.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1026.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1025.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1004.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 992.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 986.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 984.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 984.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 972.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 955.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 940.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 929.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 927.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 909.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 900.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 891.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 884.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 883.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 864.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 850.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 839.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 835.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 830.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 828.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 825.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 820.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 820.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 810.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 807.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 803.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 800.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 800.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 799.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 792.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 791.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 773.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 770.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 767.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 765.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 753.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 748.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 747.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 744.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 744.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 742.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 739.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 737.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 737.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 733.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 731.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 730.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 729.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 728.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 727.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 726.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 725.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 722.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 720.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 718.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 713.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 712.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 710.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 703.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 696.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 695.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 694.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 691.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 689.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 686.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 682.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 681.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 679.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 675.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 675.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 674.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 672.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 672.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 670.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 669.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 669.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 669.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 666.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 664.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 662.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 661.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 659.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 658.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 656.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 655.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 655.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 654.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 654.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 652.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 650.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 647.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 641.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 641.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 641.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 640.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 640.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 627.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 622.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 616.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 615.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 614.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 614.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 613.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 613.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 610.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 609.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 609.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 608.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 603.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 602.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 600.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 600.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 599.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 599.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 593.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 592.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 592.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 587.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 587.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 585.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 584.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 583.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 583.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 581.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 577.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 575.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 575.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 572.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 571.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 570.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 568.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 568.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 568.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 568.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 565.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 562.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 561.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 560.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 558.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 555.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 549.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 544.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 542.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 541.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 540.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 538.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 538.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 536.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 536.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 535.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 532.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 531.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 530.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 527.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 527.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 526.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 523.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 521.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 521.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 521.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 517.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 511.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 510.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 509.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 507.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 507.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 503.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 502.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 501.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 500.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 496.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 495.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 495.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 495.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 489.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 484.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 484.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 483.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 481.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 477.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 476.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 472.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 466.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 460.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 459.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 453.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 450.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 450.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 448.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 445.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 445.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 444.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 443.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 441.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 441.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 441.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 441.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 434.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 432.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 429.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 428.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 427.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 427.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 425.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 423.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 421.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 419.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 418.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 418.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 413.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 412.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 410.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 408.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 405.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 401.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 397.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 397.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 395.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 394.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 384.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 380.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 376.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 366.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 335.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 332.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 322.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 319.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 317.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 315.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 592.9
Samples: 205

Max nTPM: 1612.2
Min nTPM: 307.7
Std nTPM: 188.0
Median nTPM: 546.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1612.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1356.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1146.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1114.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1102.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1029.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 977.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 964.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 951.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 951.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 915.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 915.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 914.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 902.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 897.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 889.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 863.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 853.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 851.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 847.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 843.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 842.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 835.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 828.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 815.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 809.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 797.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 786.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 778.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 770.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 767.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 764.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 760.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 742.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 742.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 734.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 732.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 730.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 727.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 714.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 713.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 709.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 708.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 703.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 703.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 695.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 694.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 694.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 691.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 685.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 678.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 677.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 675.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 673.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 670.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 662.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 658.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 654.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 651.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 650.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 646.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 642.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 641.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 635.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 633.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 631.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 631.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 629.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 628.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 625.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 624.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 622.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 621.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 618.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 616.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 614.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 613.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 608.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 606.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 605.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 604.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 603.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 601.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 594.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 593.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 592.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 590.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 590.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 585.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 584.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 584.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 580.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 580.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 576.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 573.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 570.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 561.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 561.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 558.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 554.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 554.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 548.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 546.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 544.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 543.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 543.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 539.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 539.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 538.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 536.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 535.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 533.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 532.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 532.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 528.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 527.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 525.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 525.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 522.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 522.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 521.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 520.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 519.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 516.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 516.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 516.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 512.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 508.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 506.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 504.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 497.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 495.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 494.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 493.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 493.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 493.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 492.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 489.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 488.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 487.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 486.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 485.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 485.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 482.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 481.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 480.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 480.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 478.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 474.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 473.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 470.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 465.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 465.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 463.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 463.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 463.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 462.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 460.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 459.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 455.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 451.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 448.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 447.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 446.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 446.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 446.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 445.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 443.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 439.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 438.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 436.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 431.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 430.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 428.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 428.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 427.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 421.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 421.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 411.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 410.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 409.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 407.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 397.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 394.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 394.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 391.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 391.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 390.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 387.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 385.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 380.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 374.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 374.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 371.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 368.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 362.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 357.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 357.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 352.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 348.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 348.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 342.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 323.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 318.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 307.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

12.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 9.5
FF:10164-103B2 76 years, female 9.5
Nucleus accumbens
Scaled Tags Per Million: 7.1
FF:10037-101F1 23-56 years, mixed 7.1
Putamen
Scaled Tags Per Million: 12.7
FF:10176-103C5 60 years, female 12.7
Globus pallidus
Scaled Tags Per Million: 7.0
FF:10161-103A8 76 years, female 9.3
FF:10175-103C4 60 years, female 4.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.3
Sample A Male 7.4
Sample B Male 9.9
Sample C Female 6.5
Sample D Female 5.3
Septum
nTPM: 9.4
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.0
Sample A Male 8.5
Sample B Male 10.7
Sample C Female 10.3
Sample D Female 8.0
Ventral forebrain
nTPM: 7.3
Samples: 4

Max nTPM: 10.7
Min nTPM: 4.8
Sample A Male 7.5
Sample B Male 6.1
Sample C Female 10.7
Sample D Female 4.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
70813317 Antisense, RP_050712_03_F09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
70813317 Antisense, RP_050712_03_F09, Mouse strain C57BL/6J (56 days, male) 0.0

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