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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:386.6 nTPM
FANTOM5:7.2 Scaled Tags Per Million
Allen mouse:0.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

386.6
Sample id Sample description nTPM
Area postrema
nTPM: 305.0
2306 Male, age 80, both hemispheres 340.4
2799 Male, age 61, both hemispheres 321.4
2054 Male, age 76, both hemispheres 253.3
Dorsal medullary reticular nucleus
nTPM: 249.1
2373 Male, age 61, both hemispheres 275.1
2040 Female, age 85, both hemispheres 264.9
2088 Male, age 76, both hemispheres 207.3
Dorsal motor vagal complex
nTPM: 279.3
2797 Male, age 61, both hemispheres 370.7
2807 Female, age 85, both hemispheres 366.7
2643 Male, age 74, both hemispheres 272.8
2813 Female, age 72, unknown 269.3
2185 Male, age 76, both hemispheres 246.6
2000 Male, age 74, unknown 241.5
2133 Female, age 91, both hemispheres 235.4
2844 Male, age 55, unknown 231.3
Gigantocellular reticular nuclei, medullary
nTPM: 263.7
2314 Male, age 61, both hemispheres 346.9
2387 Female, age 91, both hemispheres 268.4
2310 Male, age 80, both hemispheres 266.5
1876 Female, age 85, both hemispheres 244.9
2022 Male, age 76, right hemisphere 238.4
2462 Male, age 74, both hemispheres 217.1
Gigantocellular reticular nuclei, pars
nTPM: 237.9
2706 Male, age 80, both hemispheres 254.5
2336 Male, age 61, both hemispheres 248.1
2330 Male, age 80, both hemispheres 247.6
2084 Female, age 85, both hemispheres 230.9
2168 Male, age 76, both hemispheres 208.1
Inferior olive
nTPM: 316.5
2178 Male, age 61, both hemispheres 346.4
2628 Female, age 91, both hemispheres 335.2
2379 Male, age 80, both hemispheres 309.5
2085 Female, age 85, both hemispheres 300.4
2563 Male, age 74, both hemispheres 290.8
Lateral medullary reticular nucleus
nTPM: 330.5
2852 Male, age 80, both hemispheres 380.4
2305 Male, age 74, both hemispheres 378.2
2190 Female, age 85, both hemispheres 339.3
2374 Male, age 61, both hemispheres 327.8
2804 Female, age 91, both hemispheres 288.0
2044 Male, age 76, both hemispheres 269.4
Medial olivary nucleus
nTPM: 386.6
1943 Male, age 61, both hemispheres 464.1
1962 Male, age 76, both hemispheres 401.8
2851 Male, age 80, both hemispheres 381.0
2138 Female, age 91, both hemispheres 299.4
Medial vestibular nucleus
nTPM: 268.4
2624 Male, age 61, both hemispheres 350.1
2801 Male, age 74, both hemispheres 298.5
2803 Female, age 91, both hemispheres 273.4
2743 Female, age 85, both hemispheres 245.2
2093 Male, age 80, both hemispheres 230.1
2134 Male, age 76, both hemispheres 213.3
Motor hypoglossal nucleus
nTPM: 256.8
2182 Male, age 80, both hemispheres 351.5
2132 Female, age 85, both hemispheres 273.3
2125 Female, age 91, both hemispheres 242.9
2461 Male, age 61, both hemispheres 208.8
2277 Male, age 76, both hemispheres 207.7
Nucleus ambiguus
nTPM: 252.7
2071 Male, age 76, both hemispheres 334.1
2096 Female, age 85, both hemispheres 171.2
Nucleus cuneatus
nTPM: 279.4
2808 Female, age 85, both hemispheres 402.0
2380 Male, age 80, both hemispheres 338.4
2381 Male, age 80, both hemispheres 293.9
2564 Male, age 74, both hemispheres 289.0
2376 Male, age 61, both hemispheres 287.8
2805 Female, age 91, both hemispheres 258.5
2562 Male, age 61, both hemispheres 254.8
2131 Male, age 76, both hemispheres 201.4
2100 Male, age 76, both hemispheres 189.1
Nucleus gracilis
nTPM: 348.9
2382 Male, age 80, both hemispheres 354.4
2627 Male, age 74, both hemispheres 350.6
2299 Female, age 85, both hemispheres 341.9
Nucleus raphe obscurus
nTPM: 347.6
2142 Male, age 76, midline 370.8
2845 Female, age 85, midline 352.2
2800 Male, age 61, midline 319.8
Nucleus raphe pallidus
nTPM: 381.8
1924 Male, age 61, midline 469.3
2145 Male, age 76, midline 342.2
2183 Male, age 80, midline 333.9
Nucleus tractus solitarii
nTPM: 249.3
2191 Female, age 85, both hemispheres 327.6
2144 Female, age 91, right hemisphere 251.6
2656 Male, age 76, both hemispheres 210.5
2307 Male, age 80, both hemispheres 207.6
Parvicellular reticular nuclei
nTPM: 248.9
2095 Male, age 76, both hemispheres 267.4
2119 Male, age 80, both hemispheres 265.5
2558 Male, age 74, both hemispheres 214.0
Parvicellular reticular nuclei, medullary
nTPM: 234.7
2091 Female, age 85, both hemispheres 244.1
2189 Female, age 91, both hemispheres 236.7
2181 Male, age 80, left hemisphere 223.2
Peritrigeminal nucleus
nTPM: 326.0
2067 Female, age 85, both hemispheres 365.8
2136 Male, age 76, both hemispheres 320.6
2179 Male, age 61, both hemispheres 291.7
Prepositus hypoglossal nucleus
nTPM: 280.9
2855 Female, age 85, right hemisphere 293.1
2086 Male, age 80, both hemispheres 268.7
Spinal trigeminal nucleus, caudal
nTPM: 264.3
2312 Male, age 61, both hemispheres 321.9
2308 Male, age 80, both hemispheres 291.2
2642 Male, age 74, both hemispheres 261.2
2390 Female, age 91, both hemispheres 229.5
2447 Male, age 76, both hemispheres 217.9
Spinal trigeminal nucleus, interpolar
nTPM: 268.4
2033 Male, age 80, both hemispheres 298.1
2386 Female, age 85, both hemispheres 277.2
2625 Male, age 61, both hemispheres 266.3
2389 Female, age 91, both hemispheres 255.9
2066 Male, age 76, right hemisphere 244.8
Spinal vestibular nucleus
nTPM: 280.6
2796 Male, age 61, both hemispheres 322.4
2780 Male, age 80, both hemispheres 292.7
2384 Male, age 74, both hemispheres 292.0
2806 Female, age 85, both hemispheres 289.3
2748 Male, age 76, both hemispheres 256.9
2186 Female, age 91, both hemispheres 230.4
Superior vestibular nucleus
nTPM: 301.0
2383 Male, age 74, both hemispheres 325.0
2015 Male, age 80, both hemispheres 311.2
2061 Male, age 76, both hemispheres 266.7
Ventral medullary reticular nucleus
nTPM: 263.1
2372 Male, age 61, both hemispheres 302.8
2060 Male, age 76, both hemispheres 223.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 307.1
2118 Male, age 80, both hemispheres 341.2
2302 Female, age 91, both hemispheres 310.2
1986 Male, age 76, both hemispheres 297.0
2180 Male, age 61, both hemispheres 296.1
2741 Female, age 85, both hemispheres 291.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 7.2
FF:10155-103A2 76 years, female 9.2
FF:10038-101F2 18-64 years, mixed 6.6
FF:10174-103C3 60 years, female 5.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
70813317 Antisense, RP_050712_03_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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