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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:935.7 nTPM
FANTOM5:1338.9 Scaled Tags Per Million
Allen mouse:11.7 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

935.7
Sample id Sample description nTPM
Area postrema
nTPM: 428.1
2054 Male, age 76, both hemispheres 562.0
2799 Male, age 61, both hemispheres 376.0
2306 Male, age 80, both hemispheres 346.3
Dorsal medullary reticular nucleus
nTPM: 644.1
2040 Female, age 85, both hemispheres 848.6
2373 Male, age 61, both hemispheres 556.4
2088 Male, age 76, both hemispheres 527.2
Dorsal motor vagal complex
nTPM: 623.6
2133 Female, age 91, both hemispheres 844.5
2000 Male, age 74, unknown 761.5
2813 Female, age 72, unknown 693.5
2643 Male, age 74, both hemispheres 634.7
2844 Male, age 55, unknown 609.4
2797 Male, age 61, both hemispheres 568.5
2807 Female, age 85, both hemispheres 461.7
2185 Male, age 76, both hemispheres 415.0
Gigantocellular reticular nuclei, medullary
nTPM: 760.4
2462 Male, age 74, both hemispheres 1149.6
2022 Male, age 76, right hemisphere 804.0
1876 Female, age 85, both hemispheres 705.0
2387 Female, age 91, both hemispheres 686.9
2310 Male, age 80, both hemispheres 679.0
2314 Male, age 61, both hemispheres 538.1
Gigantocellular reticular nuclei, pars
nTPM: 736.4
2168 Male, age 76, both hemispheres 1074.1
2706 Male, age 80, both hemispheres 680.1
2084 Female, age 85, both hemispheres 650.9
2336 Male, age 61, both hemispheres 647.4
2330 Male, age 80, both hemispheres 629.7
Inferior olive
nTPM: 540.4
2563 Male, age 74, both hemispheres 653.0
2628 Female, age 91, both hemispheres 638.9
2085 Female, age 85, both hemispheres 550.6
2178 Male, age 61, both hemispheres 439.8
2379 Male, age 80, both hemispheres 419.8
Lateral medullary reticular nucleus
nTPM: 675.0
2044 Male, age 76, both hemispheres 1041.0
2804 Female, age 91, both hemispheres 758.2
2305 Male, age 74, both hemispheres 636.6
2374 Male, age 61, both hemispheres 594.2
2190 Female, age 85, both hemispheres 581.5
2852 Male, age 80, both hemispheres 438.3
Medial olivary nucleus
nTPM: 513.1
2851 Male, age 80, both hemispheres 595.5
2138 Female, age 91, both hemispheres 509.5
1962 Male, age 76, both hemispheres 485.6
1943 Male, age 61, both hemispheres 461.6
Medial vestibular nucleus
nTPM: 788.8
2803 Female, age 91, both hemispheres 962.7
2801 Male, age 74, both hemispheres 802.2
2743 Female, age 85, both hemispheres 764.3
2134 Male, age 76, both hemispheres 741.4
2624 Male, age 61, both hemispheres 737.8
2093 Male, age 80, both hemispheres 724.1
Motor hypoglossal nucleus
nTPM: 693.7
2125 Female, age 91, both hemispheres 863.6
2461 Male, age 61, both hemispheres 800.6
2132 Female, age 85, both hemispheres 778.4
2182 Male, age 80, both hemispheres 538.1
2277 Male, age 76, both hemispheres 487.8
Nucleus ambiguus
nTPM: 490.6
2096 Female, age 85, both hemispheres 499.8
2071 Male, age 76, both hemispheres 481.4
Nucleus cuneatus
nTPM: 565.3
2564 Male, age 74, both hemispheres 712.9
2131 Male, age 76, both hemispheres 705.9
2100 Male, age 76, both hemispheres 588.5
2376 Male, age 61, both hemispheres 586.4
2381 Male, age 80, both hemispheres 574.2
2805 Female, age 91, both hemispheres 546.0
2562 Male, age 61, both hemispheres 523.7
2808 Female, age 85, both hemispheres 449.0
2380 Male, age 80, both hemispheres 401.1
Nucleus gracilis
nTPM: 464.5
2627 Male, age 74, both hemispheres 615.3
2382 Male, age 80, both hemispheres 407.1
2299 Female, age 85, both hemispheres 371.0
Nucleus raphe obscurus
nTPM: 560.8
2845 Female, age 85, midline 665.8
2800 Male, age 61, midline 653.8
2142 Male, age 76, midline 362.9
Nucleus raphe pallidus
nTPM: 547.5
1924 Male, age 61, midline 614.3
2183 Male, age 80, midline 591.8
2145 Male, age 76, midline 436.3
Nucleus tractus solitarii
nTPM: 636.8
2144 Female, age 91, right hemisphere 1036.3
2191 Female, age 85, both hemispheres 579.5
2656 Male, age 76, both hemispheres 558.1
2307 Male, age 80, both hemispheres 373.2
Parvicellular reticular nuclei
nTPM: 761.0
2558 Male, age 74, both hemispheres 943.9
2095 Male, age 76, both hemispheres 781.9
2119 Male, age 80, both hemispheres 557.3
Parvicellular reticular nuclei, medullary
nTPM: 729.0
2189 Female, age 91, both hemispheres 843.7
2091 Female, age 85, both hemispheres 690.4
2181 Male, age 80, left hemisphere 652.8
Peritrigeminal nucleus
nTPM: 755.8
2136 Male, age 76, both hemispheres 848.5
2179 Male, age 61, both hemispheres 757.7
2067 Female, age 85, both hemispheres 661.4
Prepositus hypoglossal nucleus
nTPM: 657.6
2855 Female, age 85, right hemisphere 797.5
2086 Male, age 80, both hemispheres 517.7
Spinal trigeminal nucleus, caudal
nTPM: 708.9
2390 Female, age 91, both hemispheres 1011.7
2447 Male, age 76, both hemispheres 730.3
2642 Male, age 74, both hemispheres 635.7
2312 Male, age 61, both hemispheres 605.4
2308 Male, age 80, both hemispheres 561.2
Spinal trigeminal nucleus, interpolar
nTPM: 935.7
2066 Male, age 76, right hemisphere 1139.1
2625 Male, age 61, both hemispheres 1065.9
2389 Female, age 91, both hemispheres 921.3
2386 Female, age 85, both hemispheres 823.7
2033 Male, age 80, both hemispheres 728.4
Spinal vestibular nucleus
nTPM: 733.2
2806 Female, age 85, both hemispheres 821.6
2186 Female, age 91, both hemispheres 805.4
2384 Male, age 74, both hemispheres 772.1
2796 Male, age 61, both hemispheres 700.4
2780 Male, age 80, both hemispheres 680.7
2748 Male, age 76, both hemispheres 619.0
Superior vestibular nucleus
nTPM: 654.8
2383 Male, age 74, both hemispheres 784.4
2015 Male, age 80, both hemispheres 695.5
2061 Male, age 76, both hemispheres 484.5
Ventral medullary reticular nucleus
nTPM: 575.9
2060 Male, age 76, both hemispheres 579.4
2372 Male, age 61, both hemispheres 572.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 695.8
2741 Female, age 85, both hemispheres 881.1
1986 Male, age 76, both hemispheres 880.4
2302 Female, age 91, both hemispheres 681.7
2180 Male, age 61, both hemispheres 557.7
2118 Male, age 80, both hemispheres 477.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1338.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1338.9
FF:10038-101F2 18-64 years, mixed 1538.2
FF:10174-103C3 60 years, female 1319.0
FF:10155-103A2 76 years, female 1159.5

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 11.7
179 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 11.7
180 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 9.1

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