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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1086.0
nTPM
FANTOM5:
2807.1
Scaled Tags Per Million
Allen mouse:
12.9
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1086.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 638.5
2301
Female, age 85, both hemispheres
790.9
2188
Female, age 91, both hemispheres
649.9
1984
Male, age 76, both hemispheres
641.0
2090
Male, age 80, both hemispheres
472.3
Dorsal cochlear nucleus nTPM: 638.7
2802
Male, age 74, right hemisphere
912.5
2187
Female, age 91, both hemispheres
675.1
2058
Male, age 76, both hemispheres
552.4
2370
Male, age 61, both hemispheres
552.2
2378
Male, age 80, both hemispheres
501.0
Dorsal tegmental nucleus nTPM: 613.6
2326
Male, age 74, both hemispheres
702.3
1936
Male, age 76, left hemisphere
626.1
2083
Male, age 80, both hemispheres
611.5
2358
Male, age 61, both hemispheres
514.3
Dorsolateral tegmental area nTPM: 556.5
2654
Male, age 80, both hemispheres
661.0
2360
Male, age 74, both hemispheres
648.2
2751
Female, age 85, both hemispheres
576.7
2141
Male, age 76, both hemispheres
490.7
2337
Male, age 61, both hemispheres
406.1
Kolliker-Fuse nucleus nTPM: 736.8
2163
Male, age 80, both hemispheres
841.6
2793
Female, age 91, left hemisphere
795.1
2315
Male, age 76, right hemisphere
573.7
Lateral lemniscal nuclei nTPM: 982.4
2169
Male, age 76, both hemispheres
1217.3
2036
Male, age 80, both hemispheres
1122.1
2453
Male, age 74, right hemisphere
1016.2
2746
Female, age 85, left hemisphere
864.7
2320
Female, age 91, left hemisphere
691.7
Lateral parabrachial nucleus nTPM: 725.0
2139
Female, age 85, right hemisphere
997.1
2013
Male, age 80, both hemispheres
739.0
2792
Male, age 76, both hemispheres
594.6
2790
Male, age 61, both hemispheres
569.3
Lateral vestibular nucleus nTPM: 690.6
2184
Male, age 76, both hemispheres
751.2
2311
Male, age 80, both hemispheres
630.0
Locus coeruleus nTPM: 703.5
2720
Male, age 74, both hemispheres
798.2
2123
Female, age 91, both hemispheres
787.7
2014
Male, age 55, unknown
753.1
2788
Male, age 74, unknown
720.7
2317
Female, age 72, unknown
669.1
2162
Male, age 80, both hemispheres
614.4
1980
Male, age 76, both hemispheres
581.2
Medial parabrachial nucleus nTPM: 654.9
2854
Male, age 80, both hemispheres
912.2
2170
Female, age 91, both hemispheres
699.9
2786
Male, age 76, both hemispheres
592.8
2156
Male, age 61, both hemispheres
550.4
2463
Female, age 85, right hemisphere
519.2
Medial periolivary nuclei nTPM: 947.7
2171
Female, age 85, both hemispheres
1412.5
2063
Male, age 76, both hemispheres
1203.2
2791
Male, age 74, right hemisphere
922.3
2458
Female, age 91, both hemispheres
621.1
2081
Male, age 80, both hemispheres
579.2
Motor facial nucleus nTPM: 924.4
2062
Male, age 76, both hemispheres
1236.5
2697
Female, age 85, both hemispheres
1047.2
2327
Male, age 80, both hemispheres
953.4
2365
Male, age 74, right hemisphere
942.2
2795
Female, age 91, both hemispheres
759.1
2126
Male, age 61, both hemispheres
608.4
Motor trigeminal nucleus nTPM: 688.5
2079
Male, age 80, both hemispheres
848.5
2560
Male, age 74, both hemispheres
814.9
2309
Male, age 76, both hemispheres
632.8
2321
Female, age 91, both hemispheres
594.7
2335
Male, age 61, both hemispheres
551.6
Nuclei of the trapezoid body nTPM: 1042.0
2159
Male, age 61, both hemispheres
1315.8
2735
Female, age 85, both hemispheres
1294.0
1983
Male, age 76, both hemispheres
1078.4
2166
Male, age 80, both hemispheres
829.8
2368
Female, age 91, both hemispheres
692.1
Nucleus raphe magnus nTPM: 1086.0
2160
Male, age 61, both hemispheres
1439.7
2172
Female, age 85, both hemispheres
1404.5
2455
Male, age 74, both hemispheres
1074.0
2051
Male, age 76, both hemispheres
960.0
2328
Male, age 80, both hemispheres
937.6
2459
Female, age 91, both hemispheres
700.2
Paramedian reticular nucleus nTPM: 814.7
2050
Female, age 85, both hemispheres
1265.2
2052
Male, age 76, both hemispheres
696.8
2313
Male, age 61, both hemispheres
654.1
2057
Male, age 80, both hemispheres
642.5
Pedunculopontine tegmental nucleus nTPM: 678.9
1921
Female, age 85, both hemispheres
691.2
2338
Male, age 61, both hemispheres
690.4
2334
Male, age 80, both hemispheres
655.1
Pontine nuclei nTPM: 992.6
1863
Male, age 55, unknown
1347.3
2727
Male, age 61, right hemisphere
1343.8
2787
Female, age 85, both hemispheres
1193.2
1968
Male, age 76, left hemisphere
997.2
2109
Female, age 72, unknown
984.6
2454
Male, age 74, left hemisphere
791.6
2319
Female, age 91, both hemispheres
676.7
2115
Male, age 80, left hemisphere
606.5
Pontine raphe nucleus nTPM: 782.3
2122
Female, age 85, midline
968.2
2853
Male, age 76, midline
596.4
Posteroventral cochlear nucleus nTPM: 602.1
2752
Female, age 85, both hemispheres
821.4
2070
Male, age 76, both hemispheres
669.4
2371
Male, age 61, both hemispheres
589.0
2341
Male, age 80, both hemispheres
524.7
2135
Female, age 91, both hemispheres
406.3
Principal sensory trigeminal nucleus nTPM: 930.3
2158
Male, age 61, both hemispheres
1195.8
2008
Male, age 80, left hemisphere
1120.7
2324
Male, age 76, both hemispheres
732.9
2367
Female, age 91, left hemisphere
671.8
Reticular pontine nucleus, caudal nTPM: 773.4
2332
Male, age 80, right hemisphere
940.3
2092
Male, age 76, both hemispheres
846.1
2559
Male, age 74, both hemispheres
684.9
2457
Female, age 91, both hemispheres
622.2
Reticular pontine nucleus, oral nTPM: 739.0
2012
Female, age 85, both hemispheres
931.9
2361
Male, age 74, both hemispheres
873.3
2366
Female, age 91, both hemispheres
663.1
1939
Male, age 80, both hemispheres
623.1
2167
Male, age 76, both hemispheres
603.7
Reticulotegmental nucleus nTPM: 787.6
2325
Male, age 76, both hemispheres
875.6
2452
Male, age 74, both hemispheres
807.0
2322
Female, age 91, both hemispheres
753.0
2333
Male, age 80, both hemispheres
714.9
Spinal trigeminal nucleus, oral nTPM: 679.3
2737
Female, age 85, both hemispheres
734.1
2164
Male, age 80, both hemispheres
665.4
1978
Male, age 76, both hemispheres
638.5
Subcoeruleus area nTPM: 769.5
1958
Male, age 80, both hemispheres
974.1
2089
Male, age 76, left hemisphere
868.8
2323
Female, age 91, left hemisphere
779.4
2451
Male, age 74, both hemispheres
683.6
2369
Female, age 85, left hemisphere
541.4
Superior olive nTPM: 915.5
1875
Female, age 85, both hemispheres
1259.3
2020
Male, age 76, both hemispheres
955.4
2364
Male, age 74, right hemisphere
844.8
2329
Male, age 80, right hemisphere
828.9
2561
Female, age 91, both hemispheres
689.4
Ventral periolivary nuclei nTPM: 1028.4
2130
Female, age 85, both hemispheres
1318.0
2165
Male, age 80, both hemispheres
1062.9
2023
Male, age 76, both hemispheres
931.8
2794
Female, age 91, left hemisphere
800.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 785.7
2449
Male, age 74, both hemispheres
985.0
1959
Male, age 76, both hemispheres
949.4
2840
Female, age 85, both hemispheres
920.7
2161
Male, age 80, both hemispheres
775.0
2456
Female, age 91, both hemispheres
569.0
2359
Male, age 61, both hemispheres
514.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
