PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1086.0 nTPM
FANTOM5:2807.1 Scaled Tags Per Million
Mouse:890.6 nTPM
Allen mouse:12.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1086.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 638.5
2301 Female, age 85, both hemispheres 790.9
2188 Female, age 91, both hemispheres 649.9
1984 Male, age 76, both hemispheres 641.0
2090 Male, age 80, both hemispheres 472.3
Area postrema
nTPM: 428.1
2054 Male, age 76, both hemispheres 562.0
2799 Male, age 61, both hemispheres 376.0
2306 Male, age 80, both hemispheres 346.3
Dorsal cochlear nucleus
nTPM: 638.7
2802 Male, age 74, right hemisphere 912.5
2187 Female, age 91, both hemispheres 675.1
2058 Male, age 76, both hemispheres 552.4
2370 Male, age 61, both hemispheres 552.2
2378 Male, age 80, both hemispheres 501.0
Dorsal medullary reticular nucleus
nTPM: 644.1
2040 Female, age 85, both hemispheres 848.6
2373 Male, age 61, both hemispheres 556.4
2088 Male, age 76, both hemispheres 527.2
Dorsal motor vagal complex
nTPM: 623.6
2133 Female, age 91, both hemispheres 844.5
2000 Male, age 74, unknown 761.5
2813 Female, age 72, unknown 693.5
2643 Male, age 74, both hemispheres 634.7
2844 Male, age 55, unknown 609.4
2797 Male, age 61, both hemispheres 568.5
2807 Female, age 85, both hemispheres 461.7
2185 Male, age 76, both hemispheres 415.0
Dorsal tegmental nucleus
nTPM: 613.6
2326 Male, age 74, both hemispheres 702.3
1936 Male, age 76, left hemisphere 626.1
2083 Male, age 80, both hemispheres 611.5
2358 Male, age 61, both hemispheres 514.3
Dorsolateral tegmental area
nTPM: 556.5
2654 Male, age 80, both hemispheres 661.0
2360 Male, age 74, both hemispheres 648.2
2751 Female, age 85, both hemispheres 576.7
2141 Male, age 76, both hemispheres 490.7
2337 Male, age 61, both hemispheres 406.1
Gigantocellular reticular nuclei, medullary
nTPM: 760.4
2462 Male, age 74, both hemispheres 1149.6
2022 Male, age 76, right hemisphere 804.0
1876 Female, age 85, both hemispheres 705.0
2387 Female, age 91, both hemispheres 686.9
2310 Male, age 80, both hemispheres 679.0
2314 Male, age 61, both hemispheres 538.1
Gigantocellular reticular nuclei, pars
nTPM: 736.4
2168 Male, age 76, both hemispheres 1074.1
2706 Male, age 80, both hemispheres 680.1
2084 Female, age 85, both hemispheres 650.9
2336 Male, age 61, both hemispheres 647.4
2330 Male, age 80, both hemispheres 629.7
Inferior olive
nTPM: 540.4
2563 Male, age 74, both hemispheres 653.0
2628 Female, age 91, both hemispheres 638.9
2085 Female, age 85, both hemispheres 550.6
2178 Male, age 61, both hemispheres 439.8
2379 Male, age 80, both hemispheres 419.8
Kolliker-Fuse nucleus
nTPM: 736.8
2163 Male, age 80, both hemispheres 841.6
2793 Female, age 91, left hemisphere 795.1
2315 Male, age 76, right hemisphere 573.7
Lateral lemniscal nuclei
nTPM: 982.4
2169 Male, age 76, both hemispheres 1217.3
2036 Male, age 80, both hemispheres 1122.1
2453 Male, age 74, right hemisphere 1016.2
2746 Female, age 85, left hemisphere 864.7
2320 Female, age 91, left hemisphere 691.7
Lateral medullary reticular nucleus
nTPM: 675.0
2044 Male, age 76, both hemispheres 1041.0
2804 Female, age 91, both hemispheres 758.2
2305 Male, age 74, both hemispheres 636.6
2374 Male, age 61, both hemispheres 594.2
2190 Female, age 85, both hemispheres 581.5
2852 Male, age 80, both hemispheres 438.3
Lateral parabrachial nucleus
nTPM: 725.0
2139 Female, age 85, right hemisphere 997.1
2013 Male, age 80, both hemispheres 739.0
2792 Male, age 76, both hemispheres 594.6
2790 Male, age 61, both hemispheres 569.3
Lateral vestibular nucleus
nTPM: 690.6
2184 Male, age 76, both hemispheres 751.2
2311 Male, age 80, both hemispheres 630.0
Locus coeruleus
nTPM: 703.5
2720 Male, age 74, both hemispheres 798.2
2123 Female, age 91, both hemispheres 787.7
2014 Male, age 55, unknown 753.1
2788 Male, age 74, unknown 720.7
2317 Female, age 72, unknown 669.1
2162 Male, age 80, both hemispheres 614.4
1980 Male, age 76, both hemispheres 581.2
Medial olivary nucleus
nTPM: 513.1
2851 Male, age 80, both hemispheres 595.5
2138 Female, age 91, both hemispheres 509.5
1962 Male, age 76, both hemispheres 485.6
1943 Male, age 61, both hemispheres 461.6
Medial parabrachial nucleus
nTPM: 654.9
2854 Male, age 80, both hemispheres 912.2
2170 Female, age 91, both hemispheres 699.9
2786 Male, age 76, both hemispheres 592.8
2156 Male, age 61, both hemispheres 550.4
2463 Female, age 85, right hemisphere 519.2
Medial periolivary nuclei
nTPM: 947.7
2171 Female, age 85, both hemispheres 1412.5
2063 Male, age 76, both hemispheres 1203.2
2791 Male, age 74, right hemisphere 922.3
2458 Female, age 91, both hemispheres 621.1
2081 Male, age 80, both hemispheres 579.2
Medial vestibular nucleus
nTPM: 788.8
2803 Female, age 91, both hemispheres 962.7
2801 Male, age 74, both hemispheres 802.2
2743 Female, age 85, both hemispheres 764.3
2134 Male, age 76, both hemispheres 741.4
2624 Male, age 61, both hemispheres 737.8
2093 Male, age 80, both hemispheres 724.1
Motor facial nucleus
nTPM: 924.4
2062 Male, age 76, both hemispheres 1236.5
2697 Female, age 85, both hemispheres 1047.2
2327 Male, age 80, both hemispheres 953.4
2365 Male, age 74, right hemisphere 942.2
2795 Female, age 91, both hemispheres 759.1
2126 Male, age 61, both hemispheres 608.4
Motor hypoglossal nucleus
nTPM: 693.7
2125 Female, age 91, both hemispheres 863.6
2461 Male, age 61, both hemispheres 800.6
2132 Female, age 85, both hemispheres 778.4
2182 Male, age 80, both hemispheres 538.1
2277 Male, age 76, both hemispheres 487.8
Motor trigeminal nucleus
nTPM: 688.5
2079 Male, age 80, both hemispheres 848.5
2560 Male, age 74, both hemispheres 814.9
2309 Male, age 76, both hemispheres 632.8
2321 Female, age 91, both hemispheres 594.7
2335 Male, age 61, both hemispheres 551.6
Nuclei of the trapezoid body
nTPM: 1042.0
2159 Male, age 61, both hemispheres 1315.8
2735 Female, age 85, both hemispheres 1294.0
1983 Male, age 76, both hemispheres 1078.4
2166 Male, age 80, both hemispheres 829.8
2368 Female, age 91, both hemispheres 692.1
Nucleus ambiguus
nTPM: 490.6
2096 Female, age 85, both hemispheres 499.8
2071 Male, age 76, both hemispheres 481.4
Nucleus cuneatus
nTPM: 565.3
2564 Male, age 74, both hemispheres 712.9
2131 Male, age 76, both hemispheres 705.9
2100 Male, age 76, both hemispheres 588.5
2376 Male, age 61, both hemispheres 586.4
2381 Male, age 80, both hemispheres 574.2
2805 Female, age 91, both hemispheres 546.0
2562 Male, age 61, both hemispheres 523.7
2808 Female, age 85, both hemispheres 449.0
2380 Male, age 80, both hemispheres 401.1
Nucleus gracilis
nTPM: 464.5
2627 Male, age 74, both hemispheres 615.3
2382 Male, age 80, both hemispheres 407.1
2299 Female, age 85, both hemispheres 371.0
Nucleus raphe magnus
nTPM: 1086.0
2160 Male, age 61, both hemispheres 1439.7
2172 Female, age 85, both hemispheres 1404.5
2455 Male, age 74, both hemispheres 1074.0
2051 Male, age 76, both hemispheres 960.0
2328 Male, age 80, both hemispheres 937.6
2459 Female, age 91, both hemispheres 700.2
Nucleus raphe obscurus
nTPM: 560.8
2845 Female, age 85, midline 665.8
2800 Male, age 61, midline 653.8
2142 Male, age 76, midline 362.9
Nucleus raphe pallidus
nTPM: 547.5
1924 Male, age 61, midline 614.3
2183 Male, age 80, midline 591.8
2145 Male, age 76, midline 436.3
Nucleus tractus solitarii
nTPM: 636.8
2144 Female, age 91, right hemisphere 1036.3
2191 Female, age 85, both hemispheres 579.5
2656 Male, age 76, both hemispheres 558.1
2307 Male, age 80, both hemispheres 373.2
Paramedian reticular nucleus
nTPM: 814.7
2050 Female, age 85, both hemispheres 1265.2
2052 Male, age 76, both hemispheres 696.8
2313 Male, age 61, both hemispheres 654.1
2057 Male, age 80, both hemispheres 642.5
Parvicellular reticular nuclei
nTPM: 761.0
2558 Male, age 74, both hemispheres 943.9
2095 Male, age 76, both hemispheres 781.9
2119 Male, age 80, both hemispheres 557.3
Parvicellular reticular nuclei, medullary
nTPM: 729.0
2189 Female, age 91, both hemispheres 843.7
2091 Female, age 85, both hemispheres 690.4
2181 Male, age 80, left hemisphere 652.8
Pedunculopontine tegmental nucleus
nTPM: 678.9
1921 Female, age 85, both hemispheres 691.2
2338 Male, age 61, both hemispheres 690.4
2334 Male, age 80, both hemispheres 655.1
Peritrigeminal nucleus
nTPM: 755.8
2136 Male, age 76, both hemispheres 848.5
2179 Male, age 61, both hemispheres 757.7
2067 Female, age 85, both hemispheres 661.4
Pontine nuclei
nTPM: 992.6
1863 Male, age 55, unknown 1347.3
2727 Male, age 61, right hemisphere 1343.8
2787 Female, age 85, both hemispheres 1193.2
1968 Male, age 76, left hemisphere 997.2
2109 Female, age 72, unknown 984.6
2454 Male, age 74, left hemisphere 791.6
2319 Female, age 91, both hemispheres 676.7
2115 Male, age 80, left hemisphere 606.5
Pontine raphe nucleus
nTPM: 782.3
2122 Female, age 85, midline 968.2
2853 Male, age 76, midline 596.4
Posteroventral cochlear nucleus
nTPM: 602.1
2752 Female, age 85, both hemispheres 821.4
2070 Male, age 76, both hemispheres 669.4
2371 Male, age 61, both hemispheres 589.0
2341 Male, age 80, both hemispheres 524.7
2135 Female, age 91, both hemispheres 406.3
Prepositus hypoglossal nucleus
nTPM: 657.6
2855 Female, age 85, right hemisphere 797.5
2086 Male, age 80, both hemispheres 517.7
Principal sensory trigeminal nucleus
nTPM: 930.3
2158 Male, age 61, both hemispheres 1195.8
2008 Male, age 80, left hemisphere 1120.7
2324 Male, age 76, both hemispheres 732.9
2367 Female, age 91, left hemisphere 671.8
Reticular pontine nucleus, caudal
nTPM: 773.4
2332 Male, age 80, right hemisphere 940.3
2092 Male, age 76, both hemispheres 846.1
2559 Male, age 74, both hemispheres 684.9
2457 Female, age 91, both hemispheres 622.2
Reticular pontine nucleus, oral
nTPM: 739.0
2012 Female, age 85, both hemispheres 931.9
2361 Male, age 74, both hemispheres 873.3
2366 Female, age 91, both hemispheres 663.1
1939 Male, age 80, both hemispheres 623.1
2167 Male, age 76, both hemispheres 603.7
Reticulotegmental nucleus
nTPM: 787.6
2325 Male, age 76, both hemispheres 875.6
2452 Male, age 74, both hemispheres 807.0
2322 Female, age 91, both hemispheres 753.0
2333 Male, age 80, both hemispheres 714.9
Spinal trigeminal nucleus, caudal
nTPM: 708.9
2390 Female, age 91, both hemispheres 1011.7
2447 Male, age 76, both hemispheres 730.3
2642 Male, age 74, both hemispheres 635.7
2312 Male, age 61, both hemispheres 605.4
2308 Male, age 80, both hemispheres 561.2
Spinal trigeminal nucleus, interpolar
nTPM: 935.7
2066 Male, age 76, right hemisphere 1139.1
2625 Male, age 61, both hemispheres 1065.9
2389 Female, age 91, both hemispheres 921.3
2386 Female, age 85, both hemispheres 823.7
2033 Male, age 80, both hemispheres 728.4
Spinal trigeminal nucleus, oral
nTPM: 679.3
2737 Female, age 85, both hemispheres 734.1
2164 Male, age 80, both hemispheres 665.4
1978 Male, age 76, both hemispheres 638.5
Spinal vestibular nucleus
nTPM: 733.2
2806 Female, age 85, both hemispheres 821.6
2186 Female, age 91, both hemispheres 805.4
2384 Male, age 74, both hemispheres 772.1
2796 Male, age 61, both hemispheres 700.4
2780 Male, age 80, both hemispheres 680.7
2748 Male, age 76, both hemispheres 619.0
Subcoeruleus area
nTPM: 769.5
1958 Male, age 80, both hemispheres 974.1
2089 Male, age 76, left hemisphere 868.8
2323 Female, age 91, left hemisphere 779.4
2451 Male, age 74, both hemispheres 683.6
2369 Female, age 85, left hemisphere 541.4
Superior olive
nTPM: 915.5
1875 Female, age 85, both hemispheres 1259.3
2020 Male, age 76, both hemispheres 955.4
2364 Male, age 74, right hemisphere 844.8
2329 Male, age 80, right hemisphere 828.9
2561 Female, age 91, both hemispheres 689.4
Superior vestibular nucleus
nTPM: 654.8
2383 Male, age 74, both hemispheres 784.4
2015 Male, age 80, both hemispheres 695.5
2061 Male, age 76, both hemispheres 484.5
Ventral medullary reticular nucleus
nTPM: 575.9
2060 Male, age 76, both hemispheres 579.4
2372 Male, age 61, both hemispheres 572.3
Ventral periolivary nuclei
nTPM: 1028.4
2130 Female, age 85, both hemispheres 1318.0
2165 Male, age 80, both hemispheres 1062.9
2023 Male, age 76, both hemispheres 931.8
2794 Female, age 91, left hemisphere 800.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 695.8
2741 Female, age 85, both hemispheres 881.1
1986 Male, age 76, both hemispheres 880.4
2302 Female, age 91, both hemispheres 681.7
2180 Male, age 61, both hemispheres 557.7
2118 Male, age 80, both hemispheres 477.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 785.7
2449 Male, age 74, both hemispheres 985.0
1959 Male, age 76, both hemispheres 949.4
2840 Female, age 85, both hemispheres 920.7
2161 Male, age 80, both hemispheres 775.0
2456 Female, age 91, both hemispheres 569.0
2359 Male, age 61, both hemispheres 514.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2807.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1494.1
FF:10182-103D2 60 years, female 1741.2
FF:10165-103B3 76 years, female 1247.1
Medulla oblongata
Scaled Tags Per Million: 1338.9
FF:10038-101F2 18-64 years, mixed 1538.2
FF:10174-103C3 60 years, female 1319.0
FF:10155-103A2 76 years, female 1159.5
Pons
Scaled Tags Per Million: 2807.1
FF:10033-101E6 18-54 years, mixed 2807.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 890.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 890.7
Samples: 4

Max nTPM: 925.1
Min nTPM: 874.9
Sample A Male 874.9
Sample B Male 882.0
Sample C Female 880.6
Sample D Female 925.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 11.7
179 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 11.7
180 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 9.1
Pons
Expression energy: 12.9
179 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 12.9
180 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 8.1

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