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  • MT-CO1
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: High
Cells in molecular layer: Medium
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:32106.3 nTPM
HPA Brain:64938.5 nTPM
GTEx:32106.3 nTPM
Pig:44057.3 nTPM
Mouse:26353.2 nTPM
Allen mouse:16.9 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069328Antibody CAB016241
Purkinje cells HighHigh
Cells in granular layer HighHigh
Cells in molecular layer MediumHigh





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64938.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 44648.3
1769 Male, age 76, right hemisphere 81014.7
1774 Male, age 80, left hemisphere 53562.2
1768 Female, age 72, unknown 48554.9
2055 Female, age 91, right hemisphere 47391.8
2003 Female, age 85, right hemisphere 46714.9
2006 Male, age 61, right hemisphere 31235.9
1788 Male, age 55, unknown 29566.3
2101 Male, age 74, right hemisphere 19145.4
Cerebellar nuclei
nTPM: 64938.5
2882 Male, age 76, left hemisphere 133224.1
2177 Female, age 85, both hemispheres 97774.4
2005 Male, age 80, left hemisphere 68632.9
1871 Male, age 74, unknown 62116.5
1879 Male, age 55, unknown 58147.0
1966 Female, age 91, left hemisphere 50297.5
2175 Male, age 61, right hemisphere 46139.7
2783 Female, age 72, unknown 41340.7
2318 Male, age 74, left hemisphere 26773.8
Flocculonodular lobe
nTPM: 55707.7
1767 Male, age 76, left hemisphere 73242.1
1771 Male, age 80, left hemisphere 70079.3
1765 Male, age 55, unknown 67218.3
2176 Female, age 91, right hemisphere 61071.2
1792 Male, age 74, unknown 49166.8
1835 Female, age 85, right hemisphere 43820.0
2004 Male, age 61, right hemisphere 25356.2
Vermis
nTPM: 56908.4
1770 Male, age 76, left hemisphere 99083.2
1766 Male, age 55, unknown 89317.4
1778 Female, age 91, left hemisphere 79186.3
2834 Male, age 80, left hemisphere 60491.3
1825 Male, age 74, unknown 52786.3
1751 Male, age 74, right hemisphere 41254.8
1988 Female, age 85, left hemisphere 40308.7
1928 Female, age 72, unknown 27764.2
2460 Male, age 61, both hemispheres 21983.8

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32106.3
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 32106.3
Samples: 215

Max nTPM: 291355.3
Min nTPM: 2013.7
Std nTPM: 44675.3
Median nTPM: 17102.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 291355.3
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 261433.2
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 254546.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 211766.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 202730.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 186871.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 168486.0
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 166408.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 139719.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 126176.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 115081.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 112240.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 110920.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 108592.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 107160.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 106460.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 104903.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 83903.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 82211.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 74913.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 65625.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 62273.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 60417.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 60213.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 58445.8
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 58271.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 55305.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 54143.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 49038.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 47674.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 46889.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 46604.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 45552.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 44812.5
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 44739.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 44661.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 44098.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 43619.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 43558.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 42848.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 42828.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 42414.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 41844.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 40894.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 39832.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 39021.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 38694.5
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 38607.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 38428.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 38069.8
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 37917.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 36869.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 36333.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 35992.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 34546.8
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 33727.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 31730.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 31708.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 30670.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 29180.7
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 29172.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 28752.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 28320.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 28248.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 28056.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 27890.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 27841.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 27539.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 27051.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 26461.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 26390.7
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 26257.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 26053.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 25802.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 25427.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 25136.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 23777.3
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 23439.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 23418.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 23134.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 22409.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 22389.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 22231.1
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 21999.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 21935.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 21868.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 21622.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 20957.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 20821.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 19926.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 19901.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 19804.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 19634.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 19623.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 19445.2
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 19323.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 19134.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 19081.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 18686.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 18495.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 18278.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 18192.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 18077.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 17865.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 17865.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 17319.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 17188.0
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 17102.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 16884.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 16594.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 16577.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 16471.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 16460.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 16451.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 16260.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 16089.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 16079.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 15751.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 15615.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 15596.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 15382.1
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 14992.4
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 14026.7
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 13957.2
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 13179.5
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 13145.2
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 12925.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 12924.2
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 12732.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 12642.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 12616.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 12607.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 12589.2
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 12579.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 12400.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 12160.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 12081.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 11702.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 11662.5
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 11557.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 11474.0
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 11308.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 11286.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 11265.8
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 11241.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 11085.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 10909.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 10883.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 10874.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 10830.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 10783.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 10303.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 10260.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 10191.0
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 10181.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 10114.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 9971.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 9905.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 9871.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 9471.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 9437.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 9403.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 9290.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 9279.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 9092.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 9092.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 8970.7
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 8880.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 8744.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 8717.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 8467.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 8449.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 8436.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 8426.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 8287.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 8232.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 8164.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 8158.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 8127.1
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 8025.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 7629.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 7490.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 7458.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 7449.6
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 7430.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 7366.4
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 7339.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 7189.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 7128.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 7091.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 7003.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 6763.5
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 6732.3
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 6710.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 6671.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 6563.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 6469.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 6408.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 6089.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 6034.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 5926.1
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 5806.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 5727.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 5686.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 5555.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 5499.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 5436.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 5345.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 4940.5
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 4601.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 4424.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 3896.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 3713.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 3336.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 2013.7
Show allShow less
Brain - Cerebellum
Average nTPM: 28488.8
Samples: 241

Max nTPM: 173590.4
Min nTPM: 4957.0
Std nTPM: 27753.1
Median nTPM: 19975.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 173590.4
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 167432.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 153509.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 144977.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 139405.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 123333.1
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 115170.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 110982.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 105054.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 104736.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 101689.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 94988.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 88395.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 79296.4
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 74881.7
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 74336.8
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 65312.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 62617.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 59743.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 59714.0
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 58655.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 57494.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 57402.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 56070.6
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 55226.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 55128.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 50632.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 50531.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 50183.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 50139.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 49439.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 45348.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 45109.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 44688.4
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 43654.4
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 43583.4
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 41808.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 41684.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 41581.7
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 41116.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 40980.2
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 40735.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 40174.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 38497.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 38440.5
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 38220.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 38200.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 38159.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 37571.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 36443.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 36158.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 35911.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 35840.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 35173.5
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 35084.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 34986.6
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 34587.0
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 34100.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 33391.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 33046.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 32762.9
GTEX-11ONC-3026-SM-5985W 60-69 years, male 32753.6
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 32291.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 32200.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 32168.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 31729.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 31549.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 30853.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 30840.1
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 30382.0
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 30220.3
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 30122.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 30115.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 29893.1
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 29619.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 29517.6
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 27525.8
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 27090.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 26923.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 25992.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 25802.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 25754.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 25696.2
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 25536.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 25496.3
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 25457.7
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 25389.7
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 25339.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 25294.0
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 25105.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 24365.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 24283.9
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 23697.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 23507.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 23474.9
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 23460.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 23280.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 23254.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 23232.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 22951.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 22759.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 22616.2
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 22170.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 22003.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 21532.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 21379.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 21357.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 21147.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 21038.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 21002.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 20977.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 20953.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 20890.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 20862.9
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 20819.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 20747.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 20608.4
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 20348.8
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 20336.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 20279.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 19975.3
GTEX-RU72-2926-SM-2TF66 50-59 years, female 19861.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 19764.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 19644.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 19487.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 19042.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 18928.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 18880.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 18563.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 18512.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 18458.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 18233.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 18089.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 18077.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 18025.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 17893.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 17628.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 17327.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 17189.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 17167.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 17156.8
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 16908.8
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 16767.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 16691.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 16627.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 16583.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 16547.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 16435.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 16339.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 16159.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 15940.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 15247.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 14999.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 14771.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 14757.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 14699.8
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 14242.6
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 14223.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 13899.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 13897.7
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 13869.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 13837.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 13778.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 13537.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 13454.6
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 13358.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 13308.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 13242.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 13234.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 13128.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 13056.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 12828.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 12789.1
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 12768.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 12701.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 12660.6
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 12653.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 12622.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 12611.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 12381.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 12136.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 12098.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 12008.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 11980.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 11931.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 11851.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 11795.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 11749.1
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 11689.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 11624.3
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 11513.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 11447.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 11445.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 11395.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 11342.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 11312.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 11214.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 11214.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 11030.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 10978.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 10951.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 10936.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 10830.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 10707.3
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 10613.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 10502.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 10407.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 10314.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 10086.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 9989.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 9951.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 9719.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 9653.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 9595.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 9500.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 9406.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 9321.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 9315.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 9166.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 8835.2
GTEX-WL46-2826-SM-3LK81 50-59 years, male 8646.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 8582.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 8261.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 8226.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 8204.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 8154.0
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 8084.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 7886.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 7821.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 7715.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 7711.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 7467.8
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 7379.7
GTEX-1192X-3226-SM-5987D 50-59 years, male 7191.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 7037.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 6787.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 6784.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 6472.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 6159.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 6124.7
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 4957.0
Show allShow less

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44057.3
Pig sample Sample description nTPM
Cerebellum
nTPM: 44057.3
Samples: 4

Max nTPM: 67509.6
Min nTPM: 30085.5
Sample A Female 67509.6
Sample B Female 37991.6
Sample C Male 40642.3
Sample D Male 30085.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26353.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 26353.3
Samples: 4

Max nTPM: 28512.5
Min nTPM: 24105.4
Sample A Male 25843.6
Sample B Male 28512.5
Sample C Female 24105.4
Sample D Female 26951.5

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.9
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 16.9
75043148 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 16.9
73927706 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 16.2

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