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  • MT-CO1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:126568.4 nTPM
HPA Brain:105369.5 nTPM
GTEx:126568.4 nTPM
Pig:162909.3 nTPM
Mouse:50215.4 nTPM
Allen mouse:27.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069328Antibody CAB016241
Glial cells LowHigh
Neuronal cells HighHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105369.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 66534.2
2290 Female, age 72, unknown 109445.5
2846 Female, age 79, unknown 88310.5
1857 Female, age 85, left hemisphere 67915.3
2289 Male, age 61, right hemisphere 58477.5
1781 Male, age 74, unknown 56255.2
2481 Female, age 94, left hemisphere 53878.9
1854 Male, age 80, left hemisphere 49280.4
2288 Male, age 75, left hemisphere 48710.4
Globus pallidus, externus
nTPM: 78015.0
2646 Male, age 61, right hemisphere 149152.3
2567 Female, age 72, unknown 114871.0
1996 Male, age 80, right hemisphere 54937.5
2772 Female, age 79, unknown 40935.4
2395 Male, age 75, both hemispheres 30178.9
Globus pallidus, internus
nTPM: 59115.7
2566 Female, age 72, unknown 85810.4
2483 Female, age 94, right hemisphere 81673.7
1818 Male, age 74, unknown 72633.5
2037 Male, age 80, right hemisphere 50686.4
2111 Female, age 85, right hemisphere 44550.8
2287 Male, age 75, right hemisphere 43695.0
2778 Female, age 91, both hemispheres 34759.8
Nucleus accumbens
nTPM: 53699.1
2698 Female, age 72, unknown 92469.9
1783 Male, age 74, unknown 60532.8
1806 Female, age 85, left hemisphere 57659.8
2824 Male, age 61, right hemisphere 57129.8
1856 Female, age 91, right hemisphere 51858.1
2286 Male, age 75, left hemisphere 37897.1
2732 Male, age 80, right hemisphere 37703.7
2391 Female, age 94, left hemisphere 34341.9
Nucleus basalis of Meynert
nTPM: 105369.5
2569 Male, age 61, both hemispheres 220061.5
2484 Female, age 94, left hemisphere 79971.5
2821 Male, age 75, both hemispheres 62880.3
2393 Male, age 80, right hemisphere 58564.6
Nucleus of the diagonal band
nTPM: 52733.6
2195 Female, age 85, both hemispheres 71251.4
2029 Male, age 61, right hemisphere 53273.9
2775 Male, age 80, right hemisphere 50279.5
1979 Male, age 74, unknown 48297.7
1812 Female, age 91, both hemispheres 40565.6
Putamen
nTPM: 83535.2
2489 Female, age 72, unknown 160241.7
2647 Male, age 75, left hemisphere 114044.2
1829 Male, age 74, unknown 84909.5
2482 Female, age 94, left hemisphere 73719.4
1838 Male, age 80, right hemisphere 55519.0
2466 Female, age 79, unknown 50803.5
1937 Female, age 91, right hemisphere 45509.1
Septal nuclei
nTPM: 53611.3
2394 Male, age 61, left hemisphere 90164.6
2059 Female, age 85, both hemispheres 56376.3
1960 Male, age 74, unknown 55781.4
2199 Male, age 80, right hemisphere 50761.4
2629 Female, age 94, right hemisphere 46770.4
2031 Female, age 72, unknown 40648.8
2009 Female, age 91, both hemispheres 34775.9
Stria terminalis, bed nucleus
nTPM: 46585.4
2201 Male, age 74, unknown 64657.3
2486 Female, age 94, both hemispheres 40714.8
1974 Female, age 91, both hemispheres 34384.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126568.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101531.9
Samples: 246

Max nTPM: 785277.4
Min nTPM: 9188.7
Std nTPM: 105778.0
Median nTPM: 59498.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 785277.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 551812.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 459176.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 450690.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 450460.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 447075.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 427859.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 424970.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 396887.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 395341.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 391472.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 331595.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 304946.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 303412.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 298683.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 291456.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 274391.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 272094.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 269138.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 266873.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 249745.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 249011.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 228520.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 227424.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 221801.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 215588.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 213127.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212380.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 207613.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 205885.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 202349.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 201810.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 201364.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 197916.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 191966.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 191311.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 178609.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 178498.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 165704.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 165267.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 163587.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160982.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 157399.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 156924.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 156574.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156236.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 155781.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 154309.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 150912.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 149024.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 144339.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142360.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 141013.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129800.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 126657.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 125994.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 124707.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 122764.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122395.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121808.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 120453.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 119884.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118503.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 117159.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 114203.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 113696.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 111551.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 111189.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 109048.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 109036.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 108608.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 108166.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 107920.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 102498.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101820.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99851.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99501.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99274.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 98992.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 95994.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 94607.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 94509.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 93904.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 93860.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92568.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 91432.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89338.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 88664.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 87544.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 85836.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 85440.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 84657.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82333.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80283.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79197.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78591.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 78290.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77464.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 77187.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 75333.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74642.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 74461.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 74434.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 73541.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 73424.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 73184.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 71770.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 70495.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 70450.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69138.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 68949.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68438.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 66753.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 65466.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65239.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 64827.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64322.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 61862.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 61838.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 60705.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 60704.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60614.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 60324.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58672.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 58545.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58241.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 57805.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 57548.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 57487.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57015.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 56732.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 56532.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56506.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55087.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54160.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 53986.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53625.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 53163.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53112.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52959.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52562.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 52473.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 52271.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52115.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 52011.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 51867.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51383.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 50736.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50111.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 49819.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 49668.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48214.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47907.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47541.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 47327.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 47274.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 45722.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45216.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 45012.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 44394.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44337.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 44303.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 44004.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 43747.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 43245.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 42913.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42851.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 42676.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 42369.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 42151.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41884.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41740.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41088.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41046.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41023.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40946.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40596.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 40259.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39940.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 39469.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 39341.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 39319.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 39261.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38961.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 38744.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38278.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38202.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38120.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37967.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 37435.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 37330.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 36862.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36351.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 35975.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 35863.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 35597.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 35323.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35286.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 35148.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 34890.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 34136.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 33793.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 33778.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 33563.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33532.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33258.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33186.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33090.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33079.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 33032.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 32728.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 32469.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 32211.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31512.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31267.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30768.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 30626.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 30388.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 30110.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 29907.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29687.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29546.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 29443.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 29423.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 28839.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 28076.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 27461.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 27213.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 26501.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 26359.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 25778.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 25772.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 25257.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 24902.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 24451.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 22115.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 22042.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 21764.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21023.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20977.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 20780.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 19240.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18812.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 15909.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 13081.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 9188.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 102409.8
Samples: 246

Max nTPM: 723629.5
Min nTPM: 2242.6
Std nTPM: 119095.9
Median nTPM: 54846.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 723629.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 620406.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 547450.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 511230.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 491512.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 472165.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 463041.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 457184.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 451133.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 444660.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 434764.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 382277.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 357025.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 348844.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 347059.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 341490.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 341458.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 338464.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 331508.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 301803.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 295921.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 273121.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 271296.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 264074.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 262610.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 258584.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 258549.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 236530.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 235787.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 228706.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 217135.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 210732.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 209148.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 208004.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 203233.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 202839.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 202717.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 198285.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 194322.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 189585.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 183258.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 174071.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 173800.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 165362.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 160875.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 159941.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 150202.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 140704.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 140068.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 137522.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 136902.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 136635.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 135682.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 129645.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 127972.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 121781.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 117958.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 117825.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 117777.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 115226.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 114995.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 113203.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 111885.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 111086.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 107398.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 104765.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 103470.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 103326.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 100987.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 100791.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 100347.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 97769.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 93880.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 93050.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 91496.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 88998.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 88875.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 88624.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 88556.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 88487.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 87114.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 86597.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 86087.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 85444.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 85211.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 83364.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 78589.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 77963.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 77701.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 77499.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77242.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 74755.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74391.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74129.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 73153.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 72801.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 72524.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 70616.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 70225.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 69941.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 69860.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 69717.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66827.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 66091.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 66063.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 65787.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65751.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 65623.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 65257.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 64195.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 63593.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 61972.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 61633.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60910.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59363.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 59166.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 58856.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 58507.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 57158.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56978.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 56839.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 56390.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 54869.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 54824.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 53875.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52710.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 52661.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 52627.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 52418.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 50702.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 50269.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49962.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 48789.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 48619.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 48356.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 46879.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 46284.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 45447.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 45090.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 44503.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 43678.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 43535.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 43078.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42906.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 42819.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41514.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 41354.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 41107.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 41093.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40959.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 40041.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 39877.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39534.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 39510.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 39411.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 39018.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 39016.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 38936.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 38849.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 38764.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 38523.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38421.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 37798.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37665.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 37313.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 36824.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36641.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 36283.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 35988.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35959.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 35853.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 35816.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 35647.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 35596.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34940.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 34871.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 34486.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 34409.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 33666.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 33651.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 33550.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 33386.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 33284.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 33214.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 32618.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 32550.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32300.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 32299.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 32158.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 31854.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 31507.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30986.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30949.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30516.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30256.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 30216.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 29640.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29546.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 29429.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 29051.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 29043.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28759.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 28755.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 28751.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 28406.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 28115.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 28045.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 27778.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 27758.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27756.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 27426.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 26942.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 26661.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 26509.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 26443.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 26167.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 25910.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 25522.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 25496.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 25488.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25072.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24716.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 24714.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 24436.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 23760.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 23671.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 23614.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 23603.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 23253.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 22484.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 21596.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 20609.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 19966.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 19953.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 19837.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 18453.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 17443.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16792.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16142.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15911.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14716.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 14002.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 11329.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 10605.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9165.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2242.6
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Brain - Putamen (basal ganglia)
Average nTPM: 126568.4
Samples: 205

Max nTPM: 608928.5
Min nTPM: 13318.3
Std nTPM: 115365.5
Median nTPM: 84441.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 608928.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 608176.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 569684.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 519982.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 480704.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 460829.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 445234.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 436911.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 416398.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 379179.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 351745.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 347292.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 328676.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 328613.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 328579.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 324251.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 308570.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 299838.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 298920.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 294627.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 280227.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 275126.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 274722.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 269641.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 264088.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 263713.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 261068.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 255125.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 247711.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 229950.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 229889.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 220887.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 216753.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 208645.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 207528.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 199738.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 193094.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 186589.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 183873.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 183281.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 181683.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 181664.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 180126.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 179914.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 176190.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 174248.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 173759.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 171481.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 168616.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 159918.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 159541.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 159517.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 158287.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 155447.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 154609.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 154501.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 154262.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 152480.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 152143.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 150635.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 150556.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 145437.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 141607.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 141056.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 139790.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 138692.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 134294.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 134167.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 131255.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 129059.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 128651.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 127531.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 127006.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 124608.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 120751.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 119862.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 119717.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 119140.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 117331.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 116803.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 116742.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 112482.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 108915.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 107974.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 107047.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 104375.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 103879.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 102604.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 102519.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 98252.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 97590.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 97283.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 95032.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 94269.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 93821.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 92103.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 88607.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 88586.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 87418.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 86586.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 85942.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 85161.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 84441.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 82877.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 82679.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 81183.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 81162.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 80275.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 79696.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 78603.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 77307.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 76349.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 75691.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 75155.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74117.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 73799.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 73097.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 72566.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 72052.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 70873.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 70837.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 70256.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 68221.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 67146.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65774.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 65165.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 62738.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62668.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 62589.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 61137.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 60704.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 60138.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 58464.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 58131.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58019.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 57401.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 56874.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 56118.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 55212.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 54210.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 53626.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 52805.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 52492.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 52005.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 51722.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51070.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 51007.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 50896.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 50830.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 49327.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 47674.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 47526.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 47516.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 47502.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 47500.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 47456.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 47289.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 47149.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 47037.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 47025.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 46635.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 46373.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45621.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 45510.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45315.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45260.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 45047.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44618.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 43013.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 41769.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 41731.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41620.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40900.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 40498.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 40405.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39783.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 39703.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 38211.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37937.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 37862.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 37530.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 36742.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 33583.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33443.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 32621.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 31975.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31046.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 29874.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28787.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 28750.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 27584.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 27502.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 27271.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 26731.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 24782.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 24319.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 21585.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 19618.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 18353.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 17632.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16358.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15373.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15027.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 13334.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 13318.3
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BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162909.3
Pig sample Sample description nTPM
Caudate
nTPM: 115342.0
Samples: 4

Max nTPM: 131622.4
Min nTPM: 95864.1
Sample A Female 95864.1
Sample B Female 119977.8
Sample C Male 131622.4
Sample D Male 113903.7
Putamen
nTPM: 162909.3
Samples: 4

Max nTPM: 228989.3
Min nTPM: 101012.6
Sample A Female 101012.6
Sample B Female 170530.1
Sample C Male 228989.3
Sample D Male 151105.2
Septum
nTPM: 82801.7
Samples: 4

Max nTPM: 97515.2
Min nTPM: 66855.8
Sample A Female 97515.2
Sample B Female 87975.3
Sample C Male 78860.4
Sample D Male 66855.8
Ventral pallidum
nTPM: 102426.8
Samples: 4

Max nTPM: 105033.3
Min nTPM: 95320.4
Sample A Female 104969.4
Sample B Female 105033.3
Sample C Male 104384.0
Sample D Male 95320.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50215.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 50215.5
Samples: 4

Max nTPM: 53570.7
Min nTPM: 48393.0
Sample A Male 48393.0
Sample B Male 48766.0
Sample C Female 50132.1
Sample D Female 53570.7
Septum
nTPM: 26780.9
Samples: 4

Max nTPM: 29258.2
Min nTPM: 24937.5
Sample A Male 24937.5
Sample B Male 29258.2
Sample C Female 26218.4
Sample D Female 26709.4
Ventral forebrain
nTPM: 39847.8
Samples: 4

Max nTPM: 45583.7
Min nTPM: 35422.6
Sample A Male 39434.9
Sample B Male 38950.0
Sample C Female 45583.7
Sample D Female 35422.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

27.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 24.0
75043148 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 24.0
73927706 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 19.0
Pallidum
Expression energy: 27.0
75043148 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 27.0
73927706 Antisense, RP_051219_01_F08, Mouse strain C57BL/6J (56 days, male) 20.8

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