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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:275.0 nTPM
HPA Brain:183.2 nTPM
GTEx:275.0 nTPM
FANTOM5:262.0 Scaled Tags Per Million
Pig:149.9 nTPM
Mouse:75.3 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044610
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 171.3
1857 Female, age 85, left hemisphere 229.0
2290 Female, age 72, unknown 210.4
2846 Female, age 79, unknown 193.0
1854 Male, age 80, left hemisphere 190.5
1781 Male, age 74, unknown 149.3
2288 Male, age 75, left hemisphere 137.9
2289 Male, age 61, right hemisphere 133.6
2481 Female, age 94, left hemisphere 127.0
Globus pallidus, externus
nTPM: 138.5
1996 Male, age 80, right hemisphere 162.3
2772 Female, age 79, unknown 159.6
2395 Male, age 75, both hemispheres 141.3
2646 Male, age 61, right hemisphere 125.4
2567 Female, age 72, unknown 103.9
Globus pallidus, internus
nTPM: 142.4
2287 Male, age 75, right hemisphere 181.5
2778 Female, age 91, both hemispheres 154.9
2037 Male, age 80, right hemisphere 145.9
2483 Female, age 94, right hemisphere 141.9
1818 Male, age 74, unknown 132.5
2566 Female, age 72, unknown 120.1
2111 Female, age 85, right hemisphere 119.6
Nucleus accumbens
nTPM: 183.2
1806 Female, age 85, left hemisphere 235.4
2698 Female, age 72, unknown 222.1
1783 Male, age 74, unknown 203.9
1856 Female, age 91, right hemisphere 203.2
2824 Male, age 61, right hemisphere 187.3
2286 Male, age 75, left hemisphere 147.5
2391 Female, age 94, left hemisphere 138.6
2732 Male, age 80, right hemisphere 127.6
Nucleus basalis of Meynert
nTPM: 139.5
2393 Male, age 80, right hemisphere 145.7
2569 Male, age 61, both hemispheres 142.8
2484 Female, age 94, left hemisphere 142.1
2821 Male, age 75, both hemispheres 127.2
Nucleus of the diagonal band
nTPM: 116.8
1812 Female, age 91, both hemispheres 129.2
2775 Male, age 80, right hemisphere 121.1
2195 Female, age 85, both hemispheres 119.9
1979 Male, age 74, unknown 111.0
2029 Male, age 61, right hemisphere 102.9
Putamen
nTPM: 152.5
1838 Male, age 80, right hemisphere 190.6
1937 Female, age 91, right hemisphere 179.0
2466 Female, age 79, unknown 171.1
1829 Male, age 74, unknown 163.1
2482 Female, age 94, left hemisphere 132.8
2647 Male, age 75, left hemisphere 116.0
2489 Female, age 72, unknown 114.6
Septal nuclei
nTPM: 110.0
1960 Male, age 74, unknown 129.0
2031 Female, age 72, unknown 122.2
2059 Female, age 85, both hemispheres 116.3
2394 Male, age 61, left hemisphere 109.2
2629 Female, age 94, right hemisphere 101.6
2009 Female, age 91, both hemispheres 100.6
2199 Male, age 80, right hemisphere 91.5
Stria terminalis, bed nucleus
nTPM: 102.0
1974 Female, age 91, both hemispheres 117.2
2486 Female, age 94, both hemispheres 99.6
2201 Male, age 74, unknown 89.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 230.1
Samples: 246

Max nTPM: 551.4
Min nTPM: 79.1
Std nTPM: 72.4
Median nTPM: 220.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 551.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 499.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 461.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 426.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 417.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 406.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 403.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 381.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 378.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 373.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 365.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 365.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 364.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 363.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 354.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 353.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 343.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 338.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 332.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 325.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 322.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 319.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 317.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 317.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 313.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 313.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 311.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 309.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 305.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 305.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 303.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 302.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 301.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 299.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 297.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 296.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 296.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 294.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 294.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 293.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 291.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 291.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 291.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 290.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 290.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 288.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 287.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 283.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 281.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 279.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 279.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 278.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 278.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 277.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 277.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 276.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 276.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 276.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 276.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 274.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 273.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 273.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 272.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 271.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 271.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 271.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 269.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 268.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 268.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 267.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 266.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 265.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 263.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 263.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 259.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 259.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 259.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 259.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 258.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 257.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 255.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 255.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 254.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 253.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 252.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 252.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 252.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 250.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 250.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 250.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 249.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 247.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 246.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 245.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 245.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 244.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 243.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 243.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 243.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 242.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 242.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 240.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 239.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 236.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 235.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 234.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 232.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 231.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 230.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 230.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 228.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 228.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 228.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 228.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 226.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 222.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 220.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 220.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 220.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 219.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 219.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 219.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 218.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 217.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 217.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 217.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 216.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 214.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 213.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 212.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 211.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 210.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 209.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 208.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 208.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 207.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 206.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 206.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 206.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 204.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 203.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 202.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 201.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 201.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 200.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 200.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 200.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 200.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 199.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 199.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 199.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 198.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 195.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 194.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 194.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 192.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 192.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 191.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 191.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 190.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 190.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 190.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 188.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 188.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 187.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 187.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 185.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 183.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 182.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 182.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 180.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 180.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 179.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 179.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 179.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 179.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 178.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 177.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 176.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 175.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 174.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 173.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 172.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 172.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 170.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 168.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 168.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 167.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 167.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 164.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 164.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 163.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 163.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 161.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 159.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 157.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 155.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 152.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 151.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 151.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 150.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 150.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 149.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 147.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 146.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 146.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 145.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 144.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 140.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 138.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 137.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 137.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 137.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 135.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 135.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 131.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 131.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 129.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 126.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 125.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 125.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 114.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 108.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 275.0
Samples: 246

Max nTPM: 663.2
Min nTPM: 78.0
Std nTPM: 83.1
Median nTPM: 264.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 663.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 561.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 557.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 512.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 486.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 481.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 468.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 452.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 450.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 442.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 430.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 428.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 427.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 413.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 406.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 403.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 401.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 395.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 391.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 390.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 379.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 378.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 377.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 377.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 377.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 373.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 373.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 372.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 364.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 360.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 359.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 357.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 355.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 351.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 351.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 349.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 347.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 347.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 343.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 343.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 340.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 339.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 339.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 338.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 336.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 336.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 335.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 334.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 332.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 330.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 330.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 330.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 328.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 325.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 324.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 324.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 320.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 319.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 318.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 318.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 318.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 317.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 316.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 313.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 312.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 311.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 310.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 309.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 308.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 307.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 307.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 305.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 305.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 305.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 304.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 303.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 303.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 302.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 302.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 302.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 302.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 302.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 302.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 301.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 301.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 300.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 300.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 297.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 297.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 296.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 296.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 294.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 294.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 293.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 291.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 291.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 291.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 290.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 289.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 289.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 289.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 288.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 288.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 287.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 286.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 284.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 284.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 280.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 280.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 280.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 280.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 277.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 274.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 274.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 274.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 273.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 272.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 271.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 270.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 269.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 268.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 266.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 264.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 263.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 263.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 263.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 262.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 262.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 262.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 262.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 261.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 261.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 260.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 260.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 260.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 259.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 259.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 257.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 257.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 256.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 255.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 254.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 253.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 253.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 252.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 252.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 252.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 250.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 249.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 248.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 248.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 246.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 245.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 245.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 243.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 242.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 241.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 241.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 241.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 241.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 239.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 239.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 238.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 237.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 237.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 237.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 236.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 236.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 235.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 233.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 233.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 233.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 232.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 230.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 230.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 229.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 227.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 227.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 226.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 226.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 226.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 224.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 224.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 223.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 222.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 222.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 220.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 219.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 218.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 218.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 215.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 215.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 213.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 211.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 209.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 209.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 208.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 207.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 206.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 206.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 206.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 204.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 204.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 203.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 202.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 201.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 201.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 201.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 200.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 197.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 197.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 197.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 191.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 191.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 187.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 185.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 184.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 184.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 180.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 178.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 176.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 176.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 175.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 172.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 171.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 169.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 168.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 168.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 166.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 166.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 165.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 164.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 161.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 154.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 151.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 151.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 150.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 146.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 146.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 143.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 139.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 112.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 105.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 93.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 92.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 78.0
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Brain - Putamen (basal ganglia)
Average nTPM: 241.2
Samples: 205

Max nTPM: 450.8
Min nTPM: 115.3
Std nTPM: 71.8
Median nTPM: 231.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 450.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 438.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 434.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 419.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 419.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 411.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 384.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 380.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 379.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 376.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 367.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 367.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 365.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 360.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 360.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 358.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 352.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 350.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 350.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 348.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 345.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 343.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 341.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 341.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 336.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 332.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 328.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 327.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 326.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 324.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 324.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 320.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 320.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 320.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 319.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 314.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 313.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 313.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 312.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 312.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 312.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 310.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 309.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 307.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 304.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 303.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 302.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 301.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 293.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 291.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 288.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 287.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 284.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 280.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 277.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 275.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 275.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 275.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 274.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 272.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 271.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 270.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 270.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 264.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 263.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 263.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 261.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 261.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 259.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 259.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 258.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 258.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 258.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 255.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 255.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 254.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 252.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 251.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 250.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 249.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 248.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 248.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 246.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 246.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 245.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 245.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 243.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 242.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 240.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 240.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 240.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 240.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 240.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 239.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 239.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 238.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 236.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 235.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 234.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 233.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 232.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 232.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 231.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 230.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 229.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 228.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 227.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 227.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 226.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 226.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 226.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 226.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 225.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 223.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 223.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 223.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 222.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 218.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 218.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 217.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 216.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 216.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 214.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 213.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 211.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 211.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 209.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 208.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 207.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 207.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 206.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 206.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 204.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 201.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 200.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 197.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 197.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 197.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 196.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 196.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 196.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 196.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 193.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 189.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 189.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 189.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 189.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 188.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 188.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 186.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 186.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 186.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 186.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 185.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 185.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 184.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 183.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 183.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 183.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 183.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 181.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 180.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 180.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 180.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 177.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 176.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 175.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 171.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 167.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 165.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 164.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 163.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 162.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 162.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 162.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 161.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 161.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 159.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 158.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 158.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 158.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 157.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 155.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 155.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 155.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 154.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 151.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 150.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 150.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 150.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 148.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 147.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 147.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 147.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 146.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 146.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 143.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 142.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 142.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 138.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 138.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 138.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 134.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 132.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 115.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 183.3
FF:10164-103B2 76 years, female 183.3
Nucleus accumbens
Scaled Tags Per Million: 132.4
FF:10037-101F1 23-56 years, mixed 132.4
Putamen
Scaled Tags Per Million: 262.0
FF:10176-103C5 60 years, female 262.0
Globus pallidus
Scaled Tags Per Million: 97.3
FF:10175-103C4 60 years, female 98.8
FF:10161-103A8 76 years, female 95.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.9
Pig sample Sample description nTPM
Caudate
nTPM: 130.5
Samples: 4

Max nTPM: 157.6
Min nTPM: 104.8
Sample A Female 104.8
Sample B Female 148.6
Sample C Male 157.6
Sample D Male 111.0
Putamen
nTPM: 150.0
Samples: 4

Max nTPM: 179.5
Min nTPM: 121.2
Sample A Female 132.0
Sample B Female 121.2
Sample C Male 179.5
Sample D Male 167.1
Septum
nTPM: 146.2
Samples: 4

Max nTPM: 170.0
Min nTPM: 127.8
Sample A Female 127.8
Sample B Female 137.8
Sample C Male 149.3
Sample D Male 170.0
Ventral pallidum
nTPM: 132.5
Samples: 4

Max nTPM: 151.9
Min nTPM: 116.3
Sample A Female 116.3
Sample B Female 151.9
Sample C Male 139.5
Sample D Male 122.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 51.1
Samples: 4

Max nTPM: 60.8
Min nTPM: 46.9
Sample A Male 49.6
Sample B Male 60.8
Sample C Female 46.9
Sample D Female 46.9
Septum
nTPM: 75.3
Samples: 4

Max nTPM: 77.9
Min nTPM: 72.3
Sample A Male 76.1
Sample B Male 72.3
Sample C Female 74.9
Sample D Female 77.9
Ventral forebrain
nTPM: 61.7
Samples: 4

Max nTPM: 65.9
Min nTPM: 57.5
Sample A Male 62.0
Sample B Male 61.4
Sample C Female 65.9
Sample D Female 57.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.9
69837974 Antisense, RP_050224_01_D02, Mouse strain C57BL/6J (56 days, male) 4.0
74819344 Antisense, RP_060315_02_E11, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 4.5
69837974 Antisense, RP_050224_01_D02, Mouse strain C57BL/6J (56 days, male) 5.5
74819344 Antisense, RP_060315_02_E11, Mouse strain C57BL/6J (56 days, male) 3.5

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