HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:156.7 nTPM
HPA Brain:112.8 nTPM
GTEx:156.7 nTPM
FANTOM5:79.6 Scaled Tags Per Million
Pig:109.2 nTPM
Mouse:48.9 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044610
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 112.8
Sample id Sample description nTPM
Hippocampus
nTPM: 107.1
1898 Male, age 80, left hemisphere 144.3
2621 Female, age 67, right hemisphere 120.9
1855 Male, age 76, left hemisphere 109.1
1911 Female, age 85, right hemisphere 94.2
2529 Female, age 94, left hemisphere 93.1
2148 Female, age 91, left hemisphere 81.1
Dentate gyrus
nTPM: 108.6
2530 Female, age 94, left hemisphere 149.6
2010 Male, age 76, both hemispheres 125.5
1927 Female, age 91, both hemispheres 107.1
2246 Female, age 85, both hemispheres 101.1
2528 Male, age 74, both hemispheres 85.4
2531 Female, age 67, both hemispheres 83.0
Entorhinal gyrus
nTPM: 112.8
2764 Male, age 80, right hemisphere 130.7
1938 Female, age 85, left hemisphere 119.3
2117 Female, age 91, right hemisphere 114.3
2613 Female, age 94, left hemisphere 112.5
1787 Male, age 76, left hemisphere 108.3
2686 Male, age 75, right hemisphere 92.0
Hippocampus, CA1
nTPM: 110.1
2749 Male, age 80, left hemisphere 158.2
2045 Male, age 76, both hemispheres 111.7
1873 Female, age 85, both hemispheres 111.1
2082 Female, age 91, right hemisphere 89.1
2527 Male, age 74, both hemispheres 80.2
Hippocampus, CA2
nTPM: 112.2
1963 Male, age 80, left hemisphere 138.1
1892 Male, age 76, both hemispheres 136.2
2437 Female, age 94, left hemisphere 118.7
1940 Female, age 85, left hemisphere 106.1
2249 Male, age 74, both hemispheres 92.8
2113 Female, age 91, right hemisphere 81.0
Hippocampus, CA3
nTPM: 105.3
2137 Male, age 80, left hemisphere 129.7
1867 Male, age 76, both hemispheres 118.1
2620 Female, age 94, left hemisphere 109.8
1891 Female, age 85, both hemispheres 108.1
2436 Male, age 74, both hemispheres 83.2
2861 Female, age 67, both hemispheres 83.1
Parahippocampal cortex
nTPM: 93.1
1850 Male, age 80, both hemispheres 122.3
1990 Female, age 91, right hemisphere 98.9
2018 Male, age 76, both hemispheres 96.4
2245 Female, age 91, both hemispheres 95.7
2532 Female, age 72, left hemisphere 94.8
1933 Female, age 85, both hemispheres 93.1
2693 Female, age 94, both hemispheres 85.2
2692 Male, age 74, both hemispheres 84.5
2250 Female, age 67, right hemisphere 82.2
2622 Female, age 67, right hemisphere 77.8
Perirhinal gyrus
nTPM: 106.4
1794 Male, age 80, right hemisphere 127.1
1847 Female, age 91, left hemisphere 117.5
1841 Female, age 85, right hemisphere 107.2
2848 Male, age 76, right hemisphere 99.7
2521 Female, age 94, right hemisphere 80.3
Subiculum
nTPM: 104.6
1901 Male, age 80, both hemispheres 120.5
1977 Female, age 85, both hemispheres 115.8
2042 Male, age 76, both hemispheres 115.0
2438 Female, age 94, left hemisphere 109.9
2619 Male, age 74, both hemispheres 91.7
2729 Female, age 91, right hemisphere 74.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 156.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 156.7
Samples: 197

Max nTPM: 318.4
Min nTPM: 83.2
Std nTPM: 38.6
Median nTPM: 151.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 318.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 286.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 265.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 255.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 252.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 243.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 242.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 237.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 231.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 227.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 221.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 79.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.6
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 75.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 109.2
Pig sample Sample description nTPM
Subiculum
nTPM: 87.8
Samples: 4

Max nTPM: 111.6
Min nTPM: 78.1
Sample A Female 111.6
Sample B Female 78.1
Sample C Male 83.3
Sample D Male 78.3
Dorsal hippocampus
nTPM: 109.2
Samples: 4

Max nTPM: 134.1
Min nTPM: 82.9
Sample A Female 134.1
Sample B Female 101.1
Sample C Male 118.8
Sample D Male 82.9
Entorhinal cortex
nTPM: 90.1
Samples: 4

Max nTPM: 100.4
Min nTPM: 80.9
Sample A Female 90.1
Sample B Female 100.4
Sample C Male 88.8
Sample D Male 80.9
Ventral hippocampus
nTPM: 104.4
Samples: 4

Max nTPM: 127.3
Min nTPM: 72.1
Sample A Female 104.4
Sample B Female 72.1
Sample C Male 127.3
Sample D Male 113.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 50.5
Min nTPM: 44.8
Sample A Male 50.5
Sample B Male 46.2
Sample C Female 44.8
Sample D Female 46.4
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 54.1
Min nTPM: 45.0
Sample A Male 54.1
Sample B Male 45.0
Sample C Female 47.5
Sample D Female 48.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
69837974 Antisense, RP_050224_01_D02, Mouse strain C57BL/6J (56 days, male) 4.5
74819344 Antisense, RP_060315_02_E11, Mouse strain C57BL/6J (56 days, male) 2.2

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