HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		60.331
Protein expressioni No data
RNA expressioni
Consensus:325.8 nTPM
HPA Brain:601.9 nTPM
GTEx:325.8 nTPM
FANTOM5:832.7 Scaled Tags Per Million
Pig:655.9 nTPM
Mouse:1013.1 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB078785
Hippocampal formation mean intensity 60.331
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 39.257
Molecular layer of the dentate gyrus 27.774
Granular dentate gyrus 8.486
CA1 - oriens layer 55.482
CA1 - pyramidal layer 13.782
CA1 - radiatum layer 52.525
CA2 - oriens layer 56.342
CA2 - pyramidal layer 13.994
CA2 - radiatum layer 40.192
CA3 - oriens layer 51.046
CA3 - pyramidal layer 16.318
CA3 - radiatum layer 39.905
Stratum lucidum 48.732
Lacunosum moleculare 19.212
Subiculum 60.331

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 601.9
Sample id Sample description nTPM
Hippocampus
nTPM: 447.7
2621 Female, age 67, right hemisphere 550.2
1898 Male, age 80, left hemisphere 546.0
1855 Male, age 76, left hemisphere 490.4
2148 Female, age 91, left hemisphere 416.2
1911 Female, age 85, right hemisphere 354.1
2529 Female, age 94, left hemisphere 329.4
Dentate gyrus
nTPM: 469.8
1927 Female, age 91, both hemispheres 538.4
2530 Female, age 94, left hemisphere 527.5
2010 Male, age 76, both hemispheres 517.4
2246 Female, age 85, both hemispheres 483.7
2528 Male, age 74, both hemispheres 401.0
2531 Female, age 67, both hemispheres 350.6
Entorhinal gyrus
nTPM: 532.4
2613 Female, age 94, left hemisphere 724.8
1938 Female, age 85, left hemisphere 586.6
2764 Male, age 80, right hemisphere 568.8
1787 Male, age 76, left hemisphere 502.0
2686 Male, age 75, right hemisphere 444.2
2117 Female, age 91, right hemisphere 368.0
Hippocampus, CA1
nTPM: 499.1
2749 Male, age 80, left hemisphere 772.5
1873 Female, age 85, both hemispheres 506.0
2527 Male, age 74, both hemispheres 434.1
2045 Male, age 76, both hemispheres 425.5
2082 Female, age 91, right hemisphere 357.4
Hippocampus, CA2
nTPM: 464.7
1892 Male, age 76, both hemispheres 632.3
1963 Male, age 80, left hemisphere 507.8
2437 Female, age 94, left hemisphere 462.7
2249 Male, age 74, both hemispheres 417.4
1940 Female, age 85, left hemisphere 390.0
2113 Female, age 91, right hemisphere 377.9
Hippocampus, CA3
nTPM: 461.5
2137 Male, age 80, left hemisphere 661.7
1867 Male, age 76, both hemispheres 475.2
2620 Female, age 94, left hemisphere 449.6
2861 Female, age 67, both hemispheres 438.5
1891 Female, age 85, both hemispheres 375.5
2436 Male, age 74, both hemispheres 368.6
Parahippocampal cortex
nTPM: 545.5
2245 Female, age 91, both hemispheres 685.8
2250 Female, age 67, right hemisphere 648.2
2693 Female, age 94, both hemispheres 607.6
1850 Male, age 80, both hemispheres 575.0
2532 Female, age 72, left hemisphere 549.1
1933 Female, age 85, both hemispheres 527.6
1990 Female, age 91, right hemisphere 512.9
2622 Female, age 67, right hemisphere 485.6
2692 Male, age 74, both hemispheres 436.4
2018 Male, age 76, both hemispheres 426.7
Perirhinal gyrus
nTPM: 601.9
2521 Female, age 94, right hemisphere 705.9
1847 Female, age 91, left hemisphere 634.5
1794 Male, age 80, right hemisphere 564.9
1841 Female, age 85, right hemisphere 552.2
2848 Male, age 76, right hemisphere 551.8
Subiculum
nTPM: 425.1
1977 Female, age 85, both hemispheres 489.3
1901 Male, age 80, both hemispheres 476.0
2438 Female, age 94, left hemisphere 452.3
2619 Male, age 74, both hemispheres 427.5
2042 Male, age 76, both hemispheres 410.9
2729 Female, age 91, right hemisphere 294.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 325.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 325.8
Samples: 197

Max nTPM: 758.8
Min nTPM: 119.8
Std nTPM: 137.1
Median nTPM: 299.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 758.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 725.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 662.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 647.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 643.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 637.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 635.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 626.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 625.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 616.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 598.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 832.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 832.7
FF:10169-103B7 60 years, female 970.0
FF:10153-102I9 76 years, female 695.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 655.9
Pig sample Sample description nTPM
Subiculum
nTPM: 631.0
Samples: 4

Max nTPM: 860.6
Min nTPM: 534.7
Sample A Female 860.6
Sample B Female 534.7
Sample C Male 577.2
Sample D Male 551.6
Dorsal hippocampus
nTPM: 568.4
Samples: 4

Max nTPM: 747.9
Min nTPM: 424.0
Sample A Female 747.9
Sample B Female 557.9
Sample C Male 543.9
Sample D Male 424.0
Entorhinal cortex
nTPM: 655.9
Samples: 4

Max nTPM: 704.7
Min nTPM: 558.0
Sample A Female 704.7
Sample B Female 558.0
Sample C Male 671.3
Sample D Male 689.5
Ventral hippocampus
nTPM: 563.3
Samples: 4

Max nTPM: 715.9
Min nTPM: 386.2
Sample A Female 572.0
Sample B Female 386.2
Sample C Male 715.9
Sample D Male 579.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1013.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1013.1
Samples: 4

Max nTPM: 1176.6
Min nTPM: 954.6
Sample A Male 954.6
Sample B Male 962.9
Sample C Female 958.4
Sample D Female 1176.6
Hippocampal formation
nTPM: 942.3
Samples: 4

Max nTPM: 1008.8
Min nTPM: 873.5
Sample A Male 1008.8
Sample B Male 921.9
Sample C Female 965.0
Sample D Female 873.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
1092 Antisense, RP_Baylor_103099, Mouse strain C57BL/6J (56 days, male) 7.3
1093 Antisense, RP_Baylor_103099, Mouse strain C57BL/6J (56 days, male) 0.8

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