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TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

80.775
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:286.0 nTPM
HPA Brain:575.5 nTPM
GTEx:286.0 nTPM
Pig:400.5 nTPM
Mouse:685.8 nTPM
Allen mouse:1.9 Expression energy

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB078785
Hypothalamus mean intensity 80.775
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 10.198
Periventricular hypothalamic nucleus 72.961
Supraoptic nucleus 44.821
Tuberal nucleus 36.190
Ventral tuberomammillary nucleus 57.532
Lateral preoptic area 40.337
Medial preoptic area 46.800
Suprachiasmatic nucleus 56.633
Paraventricular hypothalamic nucleus 53.429
Anterior hypothalamic area, central 52.146
Ventral medial hypothalamic nucleus 23.240
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 53.371
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 50.777
Dorsal medial hypothalamic nucleus 43.657
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

575.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 487.0
2226 Male, age 75, left hemisphere 652.8
1961 Female, age 42, unknown 321.3
Dorsomedial nucleus
nTPM: 360.4
1989 Male, age 62, unknown 495.5
2041 Female, age 72, unknown 310.4
2017 Female, age 42, unknown 275.4
Lateral hypothalamic area
nTPM: 575.5
2228 Male, age 66, unknown 787.1
2271 Male, age 75, both hemispheres 621.6
1791 Male, age 80, right hemisphere 450.5
2412 Male, age 62, unknown 442.7
Mammillary body
nTPM: 432.7
1923 Female, age 72, unknown 580.9
1948 Female, age 72, unknown 413.8
1834 Female, age 42, unknown 401.8
2413 Male, age 66, unknown 400.5
1945 Male, age 80, right hemisphere 366.4
Paraventricular nucleus
nTPM: 426.5
2700 Male, age 62, unknown 426.5
Preoptic area
nTPM: 375.7
1907 Male, age 80, right hemisphere 393.3
2414 Female, age 72, unknown 377.1
1861 Female, age 42, unknown 356.8
Supraoptic nucleus
nTPM: 330.7
2835 Female, age 72, unknown 456.7
1894 Female, age 72, unknown 269.7
2043 Male, age 62, unknown 265.8
Ventromedial nucleus
nTPM: 327.4
1982 Female, age 72, unknown 340.0
1822 Female, age 42, unknown 314.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 286.0
Samples: 202

Max nTPM: 661.0
Min nTPM: 112.9
Std nTPM: 96.7
Median nTPM: 272.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 661.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 585.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 582.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 567.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 552.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 545.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 534.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 504.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 488.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 475.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 464.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 454.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 442.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 442.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 436.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 436.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 434.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 417.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 412.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 409.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 402.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 395.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 393.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 391.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 389.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 389.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 380.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 379.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 377.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 375.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 369.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 367.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 364.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 363.7
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 362.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 362.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 362.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 361.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 356.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 355.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 351.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 349.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 348.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 347.9
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 346.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 344.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 341.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 339.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 339.0
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 339.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 337.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 334.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 333.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 328.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 327.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 326.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 326.6
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 325.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 324.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 323.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 321.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 319.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 317.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 312.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 311.9
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 311.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 311.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 311.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 311.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 311.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 306.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 304.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 304.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 304.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 303.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 303.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 303.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 302.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 302.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 300.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 299.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 296.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 296.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 296.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 296.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 293.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 293.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 293.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 292.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 290.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 290.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 289.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 289.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 287.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 281.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 280.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 280.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 278.6
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 274.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 273.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 273.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 271.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 271.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 270.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 270.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 270.5
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 266.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 265.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 264.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 260.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 260.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 259.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 257.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 257.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 257.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 256.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 256.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 256.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 255.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 255.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 254.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 253.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 252.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 250.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 249.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 249.5
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 249.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 249.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 248.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 248.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 246.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 244.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 243.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 242.7
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 240.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 239.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 238.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 238.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 236.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 235.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 235.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 233.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 229.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 226.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 225.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 224.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 223.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 221.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 220.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 220.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 218.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 216.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 216.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 215.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 214.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 213.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 212.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 211.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 209.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 209.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 207.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 206.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 206.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 204.3
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 203.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 201.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 200.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 197.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 194.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 191.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 189.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 186.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 184.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 183.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 183.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 182.3
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 180.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 179.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 178.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 178.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 178.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 177.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 177.2
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 173.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 172.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 170.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 169.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 166.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 163.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 155.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 153.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 148.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 147.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 146.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 141.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 141.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 138.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 136.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 132.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 126.0
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 117.5
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 112.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

400.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 400.5
Samples: 4

Max nTPM: 518.5
Min nTPM: 315.3
Sample A Female 518.5
Sample B Female 413.5
Sample C Male 354.8
Sample D Male 315.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

685.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 685.8
Samples: 4

Max nTPM: 702.2
Min nTPM: 666.0
Sample A Male 666.0
Sample B Male 702.2
Sample C Female 702.0
Sample D Female 672.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
1092 Antisense, RP_Baylor_103099, Mouse strain C57BL/6J (56 days, male) 1.9
1093 Antisense, RP_Baylor_103099, Mouse strain C57BL/6J (56 days, male) 0.1

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