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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:574.0 nTPM
FANTOM5:62.0 Scaled Tags Per Million
Allen mouse:4.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

574.0
Sample id Sample description nTPM
Area postrema
nTPM: 540.3
2799 Male, age 61, both hemispheres 650.2
2306 Male, age 80, both hemispheres 591.7
2054 Male, age 76, both hemispheres 379.1
Dorsal medullary reticular nucleus
nTPM: 435.6
2373 Male, age 61, both hemispheres 490.4
2040 Female, age 85, both hemispheres 410.8
2088 Male, age 76, both hemispheres 405.5
Dorsal motor vagal complex
nTPM: 496.4
2797 Male, age 61, both hemispheres 826.0
2643 Male, age 74, both hemispheres 587.2
2807 Female, age 85, both hemispheres 528.7
2133 Female, age 91, both hemispheres 470.5
2844 Male, age 55, unknown 441.6
2185 Male, age 76, both hemispheres 388.4
2000 Male, age 74, unknown 375.8
2813 Female, age 72, unknown 352.9
Gigantocellular reticular nuclei, medullary
nTPM: 425.0
2314 Male, age 61, both hemispheres 544.2
1876 Female, age 85, both hemispheres 449.2
2310 Male, age 80, both hemispheres 411.0
2387 Female, age 91, both hemispheres 402.2
2022 Male, age 76, right hemisphere 397.6
2462 Male, age 74, both hemispheres 345.6
Gigantocellular reticular nuclei, pars
nTPM: 366.0
2084 Female, age 85, both hemispheres 452.1
2336 Male, age 61, both hemispheres 370.7
2706 Male, age 80, both hemispheres 366.7
2330 Male, age 80, both hemispheres 335.2
2168 Male, age 76, both hemispheres 305.2
Inferior olive
nTPM: 491.0
2178 Male, age 61, both hemispheres 503.9
2563 Male, age 74, both hemispheres 500.2
2085 Female, age 85, both hemispheres 499.6
2379 Male, age 80, both hemispheres 479.7
2628 Female, age 91, both hemispheres 471.8
Lateral medullary reticular nucleus
nTPM: 471.3
2852 Male, age 80, both hemispheres 575.1
2190 Female, age 85, both hemispheres 535.6
2804 Female, age 91, both hemispheres 520.4
2305 Male, age 74, both hemispheres 422.9
2374 Male, age 61, both hemispheres 410.9
2044 Male, age 76, both hemispheres 363.0
Medial olivary nucleus
nTPM: 574.0
1943 Male, age 61, both hemispheres 644.5
1962 Male, age 76, both hemispheres 617.8
2138 Female, age 91, both hemispheres 532.8
2851 Male, age 80, both hemispheres 500.9
Medial vestibular nucleus
nTPM: 409.0
2803 Female, age 91, both hemispheres 465.9
2093 Male, age 80, both hemispheres 430.3
2624 Male, age 61, both hemispheres 407.4
2743 Female, age 85, both hemispheres 406.0
2801 Male, age 74, both hemispheres 390.9
2134 Male, age 76, both hemispheres 353.3
Motor hypoglossal nucleus
nTPM: 410.0
2132 Female, age 85, both hemispheres 502.9
2125 Female, age 91, both hemispheres 464.6
2182 Male, age 80, both hemispheres 454.7
2277 Male, age 76, both hemispheres 367.0
2461 Male, age 61, both hemispheres 260.8
Nucleus ambiguus
nTPM: 467.4
2071 Male, age 76, both hemispheres 592.7
2096 Female, age 85, both hemispheres 342.1
Nucleus cuneatus
nTPM: 445.1
2808 Female, age 85, both hemispheres 556.2
2805 Female, age 91, both hemispheres 528.7
2564 Male, age 74, both hemispheres 473.2
2380 Male, age 80, both hemispheres 469.2
2562 Male, age 61, both hemispheres 455.0
2381 Male, age 80, both hemispheres 438.5
2376 Male, age 61, both hemispheres 418.4
2100 Male, age 76, both hemispheres 348.5
2131 Male, age 76, both hemispheres 318.3
Nucleus gracilis
nTPM: 532.2
2382 Male, age 80, both hemispheres 559.1
2299 Female, age 85, both hemispheres 542.6
2627 Male, age 74, both hemispheres 495.0
Nucleus raphe obscurus
nTPM: 565.5
2142 Male, age 76, midline 601.2
2800 Male, age 61, midline 559.8
2845 Female, age 85, midline 535.6
Nucleus raphe pallidus
nTPM: 570.3
1924 Male, age 61, midline 643.3
2145 Male, age 76, midline 570.0
2183 Male, age 80, midline 497.6
Nucleus tractus solitarii
nTPM: 416.9
2191 Female, age 85, both hemispheres 507.6
2144 Female, age 91, right hemisphere 461.0
2307 Male, age 80, both hemispheres 353.6
2656 Male, age 76, both hemispheres 345.5
Parvicellular reticular nuclei
nTPM: 433.2
2095 Male, age 76, both hemispheres 480.5
2119 Male, age 80, both hemispheres 473.1
2558 Male, age 74, both hemispheres 345.9
Parvicellular reticular nuclei, medullary
nTPM: 429.6
2091 Female, age 85, both hemispheres 451.1
2181 Male, age 80, left hemisphere 419.2
2189 Female, age 91, both hemispheres 418.6
Peritrigeminal nucleus
nTPM: 508.0
2067 Female, age 85, both hemispheres 627.0
2136 Male, age 76, both hemispheres 501.9
2179 Male, age 61, both hemispheres 395.1
Prepositus hypoglossal nucleus
nTPM: 473.6
2086 Male, age 80, both hemispheres 476.7
2855 Female, age 85, right hemisphere 470.5
Spinal trigeminal nucleus, caudal
nTPM: 413.5
2642 Male, age 74, both hemispheres 474.4
2308 Male, age 80, both hemispheres 441.9
2312 Male, age 61, both hemispheres 408.8
2447 Male, age 76, both hemispheres 376.3
2390 Female, age 91, both hemispheres 366.4
Spinal trigeminal nucleus, interpolar
nTPM: 414.8
2033 Male, age 80, both hemispheres 468.3
2386 Female, age 85, both hemispheres 428.7
2066 Male, age 76, right hemisphere 416.7
2389 Female, age 91, both hemispheres 407.4
2625 Male, age 61, both hemispheres 353.1
Spinal vestibular nucleus
nTPM: 468.2
2384 Male, age 74, both hemispheres 533.1
2780 Male, age 80, both hemispheres 494.6
2806 Female, age 85, both hemispheres 477.7
2748 Male, age 76, both hemispheres 446.5
2796 Male, age 61, both hemispheres 444.4
2186 Female, age 91, both hemispheres 413.0
Superior vestibular nucleus
nTPM: 482.6
2015 Male, age 80, both hemispheres 510.3
2383 Male, age 74, both hemispheres 480.5
2061 Male, age 76, both hemispheres 456.9
Ventral medullary reticular nucleus
nTPM: 459.7
2372 Male, age 61, both hemispheres 492.5
2060 Male, age 76, both hemispheres 426.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 504.4
2118 Male, age 80, both hemispheres 618.4
2302 Female, age 91, both hemispheres 521.8
2741 Female, age 85, both hemispheres 483.6
2180 Male, age 61, both hemispheres 450.9
1986 Male, age 76, both hemispheres 447.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

62.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 62.0
FF:10174-103C3 60 years, female 73.2
FF:10155-103A2 76 years, female 71.0
FF:10038-101F2 18-64 years, mixed 41.8

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.1
69873283 Antisense, RP_050510_04_H10, Mouse strain C57BL/6J (56 days, male) 4.1

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