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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:174.8 nTPM
HPA Brain:512.8 nTPM
GTEx:174.8 nTPM
FANTOM5:1397.4 Scaled Tags Per Million
Pig:452.6 nTPM
Mouse:532.2 nTPM
Allen mouse:19.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008273Antibody HPA012828Antibody CAB001984
Glial cells Not detectedNot detectedNot detected
Neuronal cells HighMediumHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

512.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 331.4
1857 Female, age 85, left hemisphere 420.1
1854 Male, age 80, left hemisphere 369.3
2290 Female, age 72, unknown 340.1
1781 Male, age 74, unknown 338.0
2846 Female, age 79, unknown 326.6
2288 Male, age 75, left hemisphere 320.7
2289 Male, age 61, right hemisphere 278.9
2481 Female, age 94, left hemisphere 257.2
Globus pallidus, externus
nTPM: 93.5
2772 Female, age 79, unknown 154.3
2395 Male, age 75, both hemispheres 93.9
2646 Male, age 61, right hemisphere 79.2
2567 Female, age 72, unknown 71.9
1996 Male, age 80, right hemisphere 68.4
Globus pallidus, internus
nTPM: 95.0
1818 Male, age 74, unknown 157.3
2483 Female, age 94, right hemisphere 156.8
2566 Female, age 72, unknown 88.2
2037 Male, age 80, right hemisphere 83.5
2287 Male, age 75, right hemisphere 81.1
2778 Female, age 91, both hemispheres 51.0
2111 Female, age 85, right hemisphere 47.4
Nucleus accumbens
nTPM: 378.6
1856 Female, age 91, right hemisphere 686.9
2824 Male, age 61, right hemisphere 445.5
1783 Male, age 74, unknown 401.1
2698 Female, age 72, unknown 384.9
1806 Female, age 85, left hemisphere 377.5
2286 Male, age 75, left hemisphere 305.3
2732 Male, age 80, right hemisphere 228.3
2391 Female, age 94, left hemisphere 199.0
Nucleus basalis of Meynert
nTPM: 229.8
2393 Male, age 80, right hemisphere 319.5
2821 Male, age 75, both hemispheres 274.7
2484 Female, age 94, left hemisphere 247.9
2569 Male, age 61, both hemispheres 77.2
Nucleus of the diagonal band
nTPM: 512.8
1812 Female, age 91, both hemispheres 641.8
2775 Male, age 80, right hemisphere 565.8
2195 Female, age 85, both hemispheres 547.6
2029 Male, age 61, right hemisphere 474.8
1979 Male, age 74, unknown 333.8
Putamen
nTPM: 304.2
1937 Female, age 91, right hemisphere 472.4
1838 Male, age 80, right hemisphere 457.6
1829 Male, age 74, unknown 318.7
2466 Female, age 79, unknown 272.6
2482 Female, age 94, left hemisphere 212.5
2647 Male, age 75, left hemisphere 211.7
2489 Female, age 72, unknown 183.8
Septal nuclei
nTPM: 436.3
1960 Male, age 74, unknown 583.6
2629 Female, age 94, right hemisphere 582.8
2009 Female, age 91, both hemispheres 539.0
2031 Female, age 72, unknown 523.5
2059 Female, age 85, both hemispheres 363.7
2199 Male, age 80, right hemisphere 230.7
2394 Male, age 61, left hemisphere 230.7
Stria terminalis, bed nucleus
nTPM: 485.4
1974 Female, age 91, both hemispheres 565.9
2486 Female, age 94, both hemispheres 500.6
2201 Male, age 74, unknown 389.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 113.4
Samples: 246

Max nTPM: 370.0
Min nTPM: 18.9
Std nTPM: 62.6
Median nTPM: 106.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 370.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 354.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 340.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 285.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 261.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 253.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 251.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 249.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 243.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 237.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 235.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 234.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 233.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 224.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 220.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 218.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 216.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 215.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 214.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 209.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 208.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 206.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 203.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 200.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 197.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 195.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 195.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 194.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 192.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 190.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 189.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 188.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 187.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 184.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 183.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 177.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 175.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 173.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 169.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 168.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 166.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 166.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 163.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 160.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 158.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 157.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 157.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 157.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 155.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 155.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 155.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 154.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 153.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 151.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 151.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 151.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 149.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 149.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 148.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 146.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 145.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 143.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 142.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 142.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 139.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 138.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 137.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 136.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 136.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 136.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 135.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 135.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 135.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 134.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 133.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 132.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 131.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 131.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 131.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 129.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 129.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 128.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 126.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 126.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 125.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 124.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 123.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 122.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 122.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 121.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 121.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 121.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 120.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 120.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 119.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 119.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 119.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 119.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 118.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 118.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 116.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 115.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 115.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 114.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 113.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 111.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 111.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 111.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 111.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 110.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 109.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 108.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 107.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 106.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 106.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 106.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 106.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 104.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 103.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 103.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 102.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 101.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 100.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 100.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 97.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 96.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 95.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 95.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 94.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 92.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 91.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 91.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 88.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 86.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 86.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 83.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 83.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 83.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 82.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 82.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 81.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 81.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 79.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 75.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 75.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 74.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 74.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 70.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 68.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 67.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 66.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 65.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 65.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 64.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 64.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 63.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 61.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 61.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 57.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 57.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 55.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 52.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 52.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 50.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 50.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 49.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 49.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 48.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 47.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 46.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 45.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 44.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 42.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 42.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 39.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 39.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 38.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 37.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 36.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 36.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 36.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 33.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 33.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 31.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 31.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 30.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 27.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 26.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 22.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 174.8
Samples: 246

Max nTPM: 357.0
Min nTPM: 22.1
Std nTPM: 81.3
Median nTPM: 177.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 357.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 355.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 353.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 347.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 346.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 333.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 332.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 328.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 325.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 325.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 316.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 309.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 309.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 308.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 307.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 303.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 297.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 293.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 292.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 290.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 289.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 287.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 282.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 280.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 275.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 275.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 274.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 274.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 273.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 269.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 269.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 268.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 268.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 266.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 265.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 264.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 262.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 262.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 262.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 261.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 259.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 258.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 258.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 257.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 255.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 252.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 250.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 249.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 249.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 247.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 244.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 244.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 241.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 239.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 237.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 236.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 236.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 235.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 235.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 234.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 234.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 230.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 230.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 230.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 229.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 229.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 228.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 228.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 225.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 220.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 220.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 219.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 219.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 218.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 215.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 215.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 212.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 212.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 212.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 212.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 211.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 210.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 208.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 208.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 207.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 207.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 205.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 205.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 204.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 203.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 202.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 202.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 202.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 202.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 201.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 201.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 201.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 200.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 200.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 198.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 198.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 197.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 195.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 195.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 195.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 195.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 194.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 194.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 194.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 193.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 193.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 192.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 189.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 189.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 186.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 186.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 185.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 185.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 183.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 183.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 182.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 179.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 178.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 176.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 175.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 175.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 174.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 174.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 174.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 173.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 170.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 170.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 169.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 169.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 168.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 168.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 167.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 167.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 166.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 166.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 165.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 165.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 164.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 164.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 163.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 161.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 161.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 161.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 161.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 160.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 160.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 160.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 158.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 155.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 154.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 154.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 152.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 152.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 149.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 147.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 143.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 142.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 142.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 142.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 138.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 137.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 137.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 134.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 133.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 133.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 132.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 131.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 131.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 130.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 130.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 129.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 128.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 127.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 126.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 124.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 123.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 120.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 112.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 112.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 107.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 105.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 103.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 101.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 100.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 98.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 98.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 97.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 96.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 96.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 95.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 93.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 93.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 92.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 92.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 86.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 85.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 83.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 83.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 83.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 74.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 72.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 70.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 67.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 64.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 64.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 64.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 63.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 59.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 58.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 57.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 55.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 54.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 53.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 52.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 52.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 50.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 48.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 46.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 42.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 40.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 38.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 38.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 37.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 34.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 29.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 29.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 29.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 27.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 23.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.1
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Brain - Putamen (basal ganglia)
Average nTPM: 93.8
Samples: 205

Max nTPM: 288.1
Min nTPM: 13.1
Std nTPM: 52.5
Median nTPM: 85.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 288.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 233.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 218.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 206.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 204.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 197.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 194.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 194.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 193.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 189.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 186.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 185.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 183.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 183.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 180.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 175.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 175.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 173.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 173.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 173.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 172.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 171.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 168.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 158.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 156.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 155.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 155.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 153.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 152.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 152.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 150.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 150.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 149.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 149.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 148.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 147.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 147.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 147.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 146.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 143.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 141.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 138.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 138.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 136.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 136.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 136.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 136.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 135.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 133.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 132.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 131.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 128.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 128.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 127.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 127.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 126.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 126.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 124.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 124.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 123.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 123.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 122.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 121.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 121.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 120.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 120.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 120.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 118.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 116.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 115.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 115.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 115.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 115.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 113.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 105.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 104.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 104.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 104.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 102.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 101.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 101.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 100.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 97.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 97.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 95.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 95.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 93.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 92.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 91.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 91.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 90.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 89.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 89.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 89.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 88.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 88.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 86.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 86.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 85.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 85.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 85.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 85.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 84.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 84.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 84.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 82.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 81.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 81.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 80.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 80.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 79.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 79.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 79.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 78.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 78.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 77.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 77.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 75.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 74.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 73.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 73.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 71.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 71.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 70.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 70.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 69.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 69.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 69.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 68.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 66.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 64.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 61.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 60.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 59.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 59.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 57.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 56.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 55.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 55.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 55.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 55.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 55.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 54.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 53.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 50.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 49.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 48.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 48.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 47.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 47.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 46.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 41.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 40.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 36.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 34.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 34.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 34.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 34.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 34.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 33.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 33.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 32.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 31.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 31.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 30.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 30.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 28.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 28.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 27.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 26.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 26.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 24.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 23.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 22.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 21.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 19.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 16.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1397.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1020.5
FF:10164-103B2 76 years, female 1020.5
Nucleus accumbens
Scaled Tags Per Million: 967.8
FF:10037-101F1 23-56 years, mixed 967.8
Putamen
Scaled Tags Per Million: 1397.4
FF:10176-103C5 60 years, female 1397.4
Globus pallidus
Scaled Tags Per Million: 527.9
FF:10175-103C4 60 years, female 864.8
FF:10161-103A8 76 years, female 191.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

452.6
Pig sample Sample description nTPM
Caudate
nTPM: 419.8
Samples: 4

Max nTPM: 464.4
Min nTPM: 388.1
Sample A Female 431.7
Sample B Female 388.1
Sample C Male 464.4
Sample D Male 394.8
Putamen
nTPM: 452.6
Samples: 4

Max nTPM: 717.1
Min nTPM: 293.9
Sample A Female 293.9
Sample B Female 408.9
Sample C Male 717.1
Sample D Male 390.5
Septum
nTPM: 443.8
Samples: 4

Max nTPM: 544.3
Min nTPM: 320.9
Sample A Female 472.4
Sample B Female 437.5
Sample C Male 544.3
Sample D Male 320.9
Ventral pallidum
nTPM: 451.3
Samples: 4

Max nTPM: 539.6
Min nTPM: 346.0
Sample A Female 484.1
Sample B Female 435.6
Sample C Male 539.6
Sample D Male 346.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

532.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 437.0
Samples: 4

Max nTPM: 509.9
Min nTPM: 371.6
Sample A Male 371.6
Sample B Male 382.5
Sample C Female 484.0
Sample D Female 509.9
Septum
nTPM: 532.3
Samples: 4

Max nTPM: 587.8
Min nTPM: 460.7
Sample A Male 551.1
Sample B Male 529.5
Sample C Female 460.7
Sample D Female 587.8
Ventral forebrain
nTPM: 521.4
Samples: 4

Max nTPM: 571.3
Min nTPM: 459.9
Sample A Male 530.8
Sample B Male 523.6
Sample C Female 459.9
Sample D Female 571.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.6
74272037 Antisense, RP_060202_01_A04, Mouse strain C57BL/6J (56 days, male) 21.3
69549641 Antisense, RP_050309_02_D02, Mouse strain C57BL/6J (56 days, male) 17.8
Pallidum
Expression energy: 19.6
74272037 Antisense, RP_060202_01_A04, Mouse strain C57BL/6J (56 days, male) 21.1
69549641 Antisense, RP_050309_02_D02, Mouse strain C57BL/6J (56 days, male) 18.1

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