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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:969.7 nTPM
HPA Brain:742.4 nTPM
GTEx:969.7 nTPM
FANTOM5:438.1 Scaled Tags Per Million
Pig:785.2 nTPM
Mouse:1134.9 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003282Antibody CAB020828
Glial cells MediumMedium
Neuronal cells Not detectedLow

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

742.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 742.4
2288 Male, age 75, left hemisphere 1098.3
2481 Female, age 94, left hemisphere 1051.5
1857 Female, age 85, left hemisphere 847.5
2290 Female, age 72, unknown 724.0
1781 Male, age 74, unknown 627.8
1854 Male, age 80, left hemisphere 617.3
2289 Male, age 61, right hemisphere 540.5
2846 Female, age 79, unknown 432.2
Globus pallidus, externus
nTPM: 671.1
2646 Male, age 61, right hemisphere 963.9
1996 Male, age 80, right hemisphere 775.2
2772 Female, age 79, unknown 724.7
2395 Male, age 75, both hemispheres 472.9
2567 Female, age 72, unknown 418.8
Globus pallidus, internus
nTPM: 657.4
2483 Female, age 94, right hemisphere 1065.9
1818 Male, age 74, unknown 800.6
2037 Male, age 80, right hemisphere 726.9
2287 Male, age 75, right hemisphere 650.8
2778 Female, age 91, both hemispheres 601.5
2566 Female, age 72, unknown 398.9
2111 Female, age 85, right hemisphere 357.4
Nucleus accumbens
nTPM: 648.7
2286 Male, age 75, left hemisphere 1224.3
1806 Female, age 85, left hemisphere 738.7
1856 Female, age 91, right hemisphere 667.4
2391 Female, age 94, left hemisphere 613.1
2824 Male, age 61, right hemisphere 563.1
1783 Male, age 74, unknown 516.1
2698 Female, age 72, unknown 509.2
2732 Male, age 80, right hemisphere 358.1
Nucleus basalis of Meynert
nTPM: 653.1
2569 Male, age 61, both hemispheres 1079.7
2484 Female, age 94, left hemisphere 644.6
2821 Male, age 75, both hemispheres 447.2
2393 Male, age 80, right hemisphere 440.8
Nucleus of the diagonal band
nTPM: 594.7
1812 Female, age 91, both hemispheres 697.2
2195 Female, age 85, both hemispheres 640.0
2775 Male, age 80, right hemisphere 637.8
2029 Male, age 61, right hemisphere 573.9
1979 Male, age 74, unknown 425.0
Putamen
nTPM: 558.2
2482 Female, age 94, left hemisphere 795.1
2647 Male, age 75, left hemisphere 661.6
1937 Female, age 91, right hemisphere 626.5
1838 Male, age 80, right hemisphere 490.0
2489 Female, age 72, unknown 448.1
2466 Female, age 79, unknown 445.9
1829 Male, age 74, unknown 440.4
Septal nuclei
nTPM: 590.8
2059 Female, age 85, both hemispheres 826.9
2031 Female, age 72, unknown 666.0
1960 Male, age 74, unknown 638.1
2009 Female, age 91, both hemispheres 569.3
2629 Female, age 94, right hemisphere 529.8
2394 Male, age 61, left hemisphere 507.9
2199 Male, age 80, right hemisphere 397.6
Stria terminalis, bed nucleus
nTPM: 583.5
1974 Female, age 91, both hemispheres 613.0
2201 Male, age 74, unknown 605.6
2486 Female, age 94, both hemispheres 531.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

969.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 917.7
Samples: 246

Max nTPM: 2746.2
Min nTPM: 134.3
Std nTPM: 397.4
Median nTPM: 835.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2746.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2454.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2174.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2156.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1939.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1935.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1852.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1750.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1708.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1704.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1687.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1645.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1633.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1630.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1615.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1601.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1560.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1557.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1518.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1503.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1487.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1482.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1478.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1460.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1440.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1430.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1411.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1383.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1375.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1364.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1353.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1341.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1334.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1319.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1319.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1306.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1296.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1289.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1288.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1268.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1267.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1256.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1234.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1232.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1226.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1224.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1217.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1217.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1211.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1204.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1201.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1194.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1189.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1179.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1175.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1165.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1155.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1154.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1137.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1137.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1132.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1128.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1126.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1121.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1116.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1113.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1110.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1108.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1100.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1091.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1087.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1087.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1080.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1076.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1075.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1071.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1065.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1060.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1038.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1034.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1033.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1032.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1029.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1025.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1012.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1012.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1009.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1006.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 999.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 996.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 993.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 992.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 973.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 972.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 966.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 959.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 957.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 951.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 937.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 935.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 934.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 928.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 928.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 926.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 902.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 898.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 897.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 897.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 895.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 895.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 890.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 888.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 886.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 883.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 872.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 861.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 861.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 854.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 852.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 847.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 843.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 836.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 836.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 833.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 831.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 831.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 830.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 827.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 819.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 817.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 811.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 806.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 806.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 806.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 799.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 797.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 794.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 794.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 792.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 784.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 781.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 781.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 778.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 776.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 768.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 758.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 756.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 749.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 739.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 739.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 739.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 737.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 736.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 734.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 732.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 731.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 723.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 718.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 717.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 717.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 715.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 712.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 710.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 709.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 707.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 702.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 702.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 699.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 694.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 691.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 689.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 688.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 688.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 686.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 681.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 680.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 679.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 679.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 677.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 676.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 668.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 666.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 657.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 649.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 647.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 644.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 642.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 637.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 636.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 633.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 619.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 603.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 602.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 599.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 597.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 590.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 589.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 585.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 583.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 578.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 576.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 570.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 570.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 564.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 561.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 559.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 558.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 555.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 553.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 542.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 541.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 540.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 534.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 534.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 534.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 532.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 531.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 531.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 527.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 520.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 519.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 518.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 513.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 511.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 508.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 489.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 478.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 468.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 447.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 436.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 425.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 416.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 415.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 411.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 397.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 363.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 363.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 363.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 339.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 317.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 302.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 265.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 248.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 231.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 195.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 134.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 865.5
Samples: 246

Max nTPM: 3746.3
Min nTPM: 59.2
Std nTPM: 449.8
Median nTPM: 765.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3746.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2318.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 2194.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2117.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 2098.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2056.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 2016.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1938.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1894.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1883.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1861.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1838.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1817.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1684.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1669.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1639.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1629.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1629.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1592.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1581.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1579.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1575.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1567.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1550.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1538.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1534.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1520.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1520.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1499.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1449.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1445.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1417.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1376.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1375.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1319.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1269.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1257.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1253.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1227.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1226.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1218.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1205.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1204.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1174.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1165.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1158.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1146.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1112.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1112.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1109.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1089.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1087.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1084.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1077.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1077.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1045.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1045.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1015.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1007.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1004.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 998.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 992.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 986.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 975.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 959.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 949.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 946.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 944.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 942.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 942.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 941.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 922.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 919.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 912.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 910.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 908.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 906.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 900.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 898.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 895.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 889.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 885.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 885.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 881.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 881.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 879.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 868.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 859.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 854.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 850.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 849.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 849.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 848.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 842.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 841.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 836.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 835.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 835.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 829.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 826.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 825.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 824.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 822.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 821.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 816.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 815.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 813.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 811.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 805.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 805.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 805.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 803.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 803.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 800.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 798.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 795.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 793.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 789.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 783.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 775.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 772.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 769.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 766.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 764.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 761.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 759.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 753.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 726.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 723.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 714.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 713.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 712.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 709.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 709.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 707.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 705.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 705.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 697.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 694.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 694.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 694.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 693.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 691.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 679.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 673.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 669.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 669.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 669.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 668.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 667.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 666.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 664.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 664.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 660.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 659.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 658.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 654.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 653.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 652.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 651.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 651.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 646.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 642.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 640.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 623.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 622.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 620.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 618.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 618.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 613.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 611.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 610.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 607.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 604.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 599.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 599.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 594.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 588.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 587.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 582.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 579.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 578.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 577.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 575.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 574.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 573.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 570.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 566.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 564.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 564.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 558.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 557.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 550.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 549.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 546.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 545.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 545.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 539.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 524.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 519.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 517.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 514.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 513.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 512.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 509.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 503.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 502.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 498.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 497.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 495.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 493.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 491.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 490.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 486.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 485.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 477.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 474.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 468.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 467.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 464.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 461.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 458.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 453.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 449.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 447.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 439.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 439.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 437.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 427.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 422.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 418.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 415.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 413.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 412.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 411.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 403.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 390.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 389.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 369.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 348.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 332.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 316.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 278.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 261.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 166.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 59.2
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Brain - Putamen (basal ganglia)
Average nTPM: 969.7
Samples: 205

Max nTPM: 2537.7
Min nTPM: 278.5
Std nTPM: 443.3
Median nTPM: 883.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2537.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2491.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2456.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2198.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2188.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2160.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2087.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2039.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1977.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1787.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1769.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1760.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1675.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1663.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1637.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1613.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1605.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1594.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1583.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1578.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1523.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1509.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1498.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1498.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1471.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1467.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1467.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1457.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1435.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1432.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1413.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1411.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1398.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1390.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1387.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1362.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1344.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1342.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1323.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1310.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1309.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1294.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1284.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1272.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1271.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1260.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1243.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1231.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1215.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1209.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1205.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1203.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1199.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1195.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1187.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1183.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1173.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1167.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1160.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1157.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1155.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1152.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1136.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1135.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1135.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1123.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1112.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1109.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1107.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1100.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1058.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1058.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1056.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1053.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1045.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1029.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1014.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1011.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1009.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1005.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1003.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 988.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 986.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 985.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 972.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 970.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 969.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 965.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 963.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 959.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 958.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 954.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 947.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 931.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 922.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 911.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 910.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 907.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 905.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 901.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 898.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 898.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 883.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 868.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 854.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 852.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 851.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 844.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 842.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 839.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 837.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 837.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 836.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 832.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 828.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 817.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 808.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 807.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 803.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 802.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 801.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 800.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 800.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 794.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 794.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 782.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 773.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 771.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 761.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 757.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 755.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 748.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 741.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 731.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 728.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 727.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 722.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 720.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 717.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 715.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 715.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 714.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 714.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 704.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 703.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 698.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 696.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 689.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 677.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 673.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 672.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 648.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 643.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 634.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 634.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 633.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 625.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 622.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 614.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 607.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 607.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 605.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 603.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 598.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 595.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 594.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 588.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 582.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 574.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 568.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 567.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 560.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 554.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 554.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 545.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 542.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 521.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 520.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 508.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 504.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 498.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 497.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 492.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 489.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 480.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 472.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 466.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 465.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 463.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 458.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 449.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 443.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 427.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 411.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 386.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 385.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 378.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 358.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 356.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 355.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 344.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 315.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 301.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 281.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 278.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

438.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 438.1
FF:10164-103B2 76 years, female 438.1
Nucleus accumbens
Scaled Tags Per Million: 393.6
FF:10037-101F1 23-56 years, mixed 393.6
Putamen
Scaled Tags Per Million: 435.4
FF:10176-103C5 60 years, female 435.4
Globus pallidus
Scaled Tags Per Million: 284.0
FF:10175-103C4 60 years, female 374.3
FF:10161-103A8 76 years, female 193.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

785.2
Pig sample Sample description nTPM
Caudate
nTPM: 686.8
Samples: 4

Max nTPM: 867.4
Min nTPM: 514.9
Sample A Female 514.9
Sample B Female 763.6
Sample C Male 867.4
Sample D Male 601.1
Putamen
nTPM: 694.5
Samples: 4

Max nTPM: 904.1
Min nTPM: 525.8
Sample A Female 674.5
Sample B Female 525.8
Sample C Male 904.1
Sample D Male 673.6
Septum
nTPM: 785.2
Samples: 4

Max nTPM: 1037.7
Min nTPM: 621.0
Sample A Female 621.0
Sample B Female 737.1
Sample C Male 1037.7
Sample D Male 745.0
Ventral pallidum
nTPM: 784.1
Samples: 4

Max nTPM: 1246.6
Min nTPM: 495.2
Sample A Female 495.2
Sample B Female 824.9
Sample C Male 1246.6
Sample D Male 569.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1134.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1119.6
Samples: 4

Max nTPM: 1252.5
Min nTPM: 1017.5
Sample A Male 1017.5
Sample B Male 1123.7
Sample C Female 1084.8
Sample D Female 1252.5
Septum
nTPM: 1134.9
Samples: 4

Max nTPM: 1318.1
Min nTPM: 894.1
Sample A Male 894.1
Sample B Male 1318.1
Sample C Female 1227.8
Sample D Female 1099.6
Ventral forebrain
nTPM: 1070.5
Samples: 4

Max nTPM: 1296.0
Min nTPM: 942.5
Sample A Male 942.5
Sample B Male 999.7
Sample C Female 1296.0
Sample D Female 1043.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.2
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 7.5
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 7.1
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.0
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 6.5
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 9.5
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 8.6
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.4
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.2

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