HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		7.743
RNA expressioni
Consensus:737.9 nTPM
HPA Brain:841.9 nTPM
GTEx:737.9 nTPM
FANTOM5:465.6 Scaled Tags Per Million
Pig:1123.7 nTPM
Mouse:1114.2 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003282Antibody CAB020828
Glial cells MediumMedium
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA067442
Hippocampal formation mean intensity 7.743
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 6.181
Molecular layer of the dentate gyrus 4.439
Granular dentate gyrus 7.743
CA1 - oriens layer 0.470
CA1 - pyramidal layer 1.000
CA1 - radiatum layer 0.746
CA2 - oriens layer 0.364
CA2 - pyramidal layer 0.314
CA2 - radiatum layer 1.374
CA3 - oriens layer 1.441
CA3 - pyramidal layer 3.091
CA3 - radiatum layer 1.027
Stratum lucidum 0.617
Lacunosum moleculare 2.856
Subiculum 3.286

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 841.9
Sample id Sample description nTPM
Hippocampus
nTPM: 802.6
1898 Male, age 80, left hemisphere 965.6
2148 Female, age 91, left hemisphere 827.1
2621 Female, age 67, right hemisphere 821.7
2529 Female, age 94, left hemisphere 801.7
1855 Male, age 76, left hemisphere 704.9
1911 Female, age 85, right hemisphere 694.7
Dentate gyrus
nTPM: 705.7
2528 Male, age 74, both hemispheres 910.8
2530 Female, age 94, left hemisphere 760.3
1927 Female, age 91, both hemispheres 731.9
2010 Male, age 76, both hemispheres 713.9
2246 Female, age 85, both hemispheres 706.1
2531 Female, age 67, both hemispheres 411.1
Entorhinal gyrus
nTPM: 636.5
2117 Female, age 91, right hemisphere 844.7
1938 Female, age 85, left hemisphere 742.1
2686 Male, age 75, right hemisphere 597.1
2764 Male, age 80, right hemisphere 592.0
1787 Male, age 76, left hemisphere 521.7
2613 Female, age 94, left hemisphere 521.4
Hippocampus, CA1
nTPM: 841.9
2527 Male, age 74, both hemispheres 1106.6
2749 Male, age 80, left hemisphere 1066.2
1873 Female, age 85, both hemispheres 969.9
2082 Female, age 91, right hemisphere 578.0
2045 Male, age 76, both hemispheres 488.6
Hippocampus, CA2
nTPM: 783.9
1963 Male, age 80, left hemisphere 1067.0
2249 Male, age 74, both hemispheres 969.1
1892 Male, age 76, both hemispheres 848.8
2437 Female, age 94, left hemisphere 682.8
2113 Female, age 91, right hemisphere 652.4
1940 Female, age 85, left hemisphere 483.5
Hippocampus, CA3
nTPM: 647.0
2436 Male, age 74, both hemispheres 858.5
2861 Female, age 67, both hemispheres 660.2
1867 Male, age 76, both hemispheres 647.4
1891 Female, age 85, both hemispheres 633.7
2137 Male, age 80, left hemisphere 553.2
2620 Female, age 94, left hemisphere 528.9
Parahippocampal cortex
nTPM: 694.4
2622 Female, age 67, right hemisphere 928.5
2692 Male, age 74, both hemispheres 869.2
2250 Female, age 67, right hemisphere 831.4
1933 Female, age 85, both hemispheres 758.1
2245 Female, age 91, both hemispheres 707.7
2693 Female, age 94, both hemispheres 660.8
1990 Female, age 91, right hemisphere 615.9
1850 Male, age 80, both hemispheres 571.6
2532 Female, age 72, left hemisphere 505.7
2018 Male, age 76, both hemispheres 495.0
Perirhinal gyrus
nTPM: 610.4
1847 Female, age 91, left hemisphere 775.3
1794 Male, age 80, right hemisphere 660.7
1841 Female, age 85, right hemisphere 640.8
2521 Female, age 94, right hemisphere 550.2
2848 Male, age 76, right hemisphere 425.1
Subiculum
nTPM: 659.9
2619 Male, age 74, both hemispheres 919.3
2729 Female, age 91, right hemisphere 819.9
2438 Female, age 94, left hemisphere 643.5
1977 Female, age 85, both hemispheres 603.0
1901 Male, age 80, both hemispheres 509.8
2042 Male, age 76, both hemispheres 464.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 737.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 737.9
Samples: 197

Max nTPM: 1784.1
Min nTPM: 105.4
Std nTPM: 299.9
Median nTPM: 727.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 1784.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1596.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1551.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1499.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1435.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 1422.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1379.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1332.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1321.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 1274.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 1260.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 465.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 465.6
FF:10169-103B7 60 years, female 508.9
FF:10153-102I9 76 years, female 422.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1123.7
Pig sample Sample description nTPM
Subiculum
nTPM: 1064.8
Samples: 4

Max nTPM: 1222.0
Min nTPM: 873.7
Sample A Female 1222.0
Sample B Female 1082.1
Sample C Male 1081.3
Sample D Male 873.7
Dorsal hippocampus
nTPM: 1037.8
Samples: 4

Max nTPM: 1282.8
Min nTPM: 878.6
Sample A Female 1282.8
Sample B Female 1046.6
Sample C Male 943.1
Sample D Male 878.6
Entorhinal cortex
nTPM: 1031.5
Samples: 4

Max nTPM: 1184.7
Min nTPM: 866.1
Sample A Female 1004.4
Sample B Female 1184.7
Sample C Male 1070.7
Sample D Male 866.1
Ventral hippocampus
nTPM: 1123.7
Samples: 4

Max nTPM: 1497.1
Min nTPM: 886.0
Sample A Female 1118.1
Sample B Female 886.0
Sample C Male 1497.1
Sample D Male 993.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1114.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1114.2
Samples: 4

Max nTPM: 1285.4
Min nTPM: 950.3
Sample A Male 1128.0
Sample B Male 950.3
Sample C Female 1285.4
Sample D Female 1093.1
Hippocampal formation
nTPM: 1014.3
Samples: 4

Max nTPM: 1174.4
Min nTPM: 882.8
Sample A Male 1174.4
Sample B Male 882.8
Sample C Female 898.7
Sample D Female 1101.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 11.1
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 9.7
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 2.0
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org