PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		27.282
Mouse brain, Intensity
Ponsi 		21.937
RNA expressioni
HPA Brain:1734.6 nTPM
FANTOM5:1024.7 Scaled Tags Per Million
Pig:1635.2 nTPM
Mouse:2236.8 nTPM
Allen mouse:9.6 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA067442
Medulla oblongata mean intensity 27.282
intensityi
FRONT BACK
Nucleus of the solitary tract 11.023
Raphe magnus nucleus 0.428
Cochlear nucleus 23.938
Lateral paragigantocellular nucleus 25.129
Raphe pallidus nucleus 3.321
Facial nucleus 17.294
Hypoglossal nucleus -
Ambiguus nucleus 22.419
External cuneate nucleus 11.485
Inferior olivary nucleus 21.704
Raphe obscures nucleus 5.704
Dorsal motor nucleus of vagus -
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 1.152
Parabrachial nucleus 3.334
Principle sensory trigeminal nucleus 8.950
Locus coeruleus 0.722
Pontine nucleus 21.937
Vestibular nucleus 11.235
Pontine reticular nucleus, oral 0.656
Lateral lemniscus 17.804
Superior paraolivary nucleus 13.953

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1734.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 798.3
1984 Male, age 76, both hemispheres 1013.1
2301 Female, age 85, both hemispheres 811.3
2188 Female, age 91, both hemispheres 765.5
2090 Male, age 80, both hemispheres 603.4
Area postrema
nTPM: 518.1
2054 Male, age 76, both hemispheres 702.7
2306 Male, age 80, both hemispheres 462.9
2799 Male, age 61, both hemispheres 388.8
Dorsal cochlear nucleus
nTPM: 722.4
2058 Male, age 76, both hemispheres 902.0
2802 Male, age 74, right hemisphere 729.6
2370 Male, age 61, both hemispheres 690.3
2187 Female, age 91, both hemispheres 677.2
2378 Male, age 80, both hemispheres 612.7
Dorsal medullary reticular nucleus
nTPM: 874.5
2040 Female, age 85, both hemispheres 1176.6
2373 Male, age 61, both hemispheres 755.2
2088 Male, age 76, both hemispheres 691.6
Dorsal motor vagal complex
nTPM: 728.6
2000 Male, age 74, unknown 1098.4
2133 Female, age 91, both hemispheres 918.8
2797 Male, age 61, both hemispheres 770.0
2643 Male, age 74, both hemispheres 687.8
2844 Male, age 55, unknown 682.3
2813 Female, age 72, unknown 659.9
2185 Male, age 76, both hemispheres 646.8
2807 Female, age 85, both hemispheres 365.0
Dorsal tegmental nucleus
nTPM: 710.1
2083 Male, age 80, both hemispheres 884.9
1936 Male, age 76, left hemisphere 847.4
2326 Male, age 74, both hemispheres 681.1
2358 Male, age 61, both hemispheres 426.9
Dorsolateral tegmental area
nTPM: 686.5
2751 Female, age 85, both hemispheres 881.0
2654 Male, age 80, both hemispheres 878.5
2141 Male, age 76, both hemispheres 794.0
2360 Male, age 74, both hemispheres 656.1
2337 Male, age 61, both hemispheres 223.0
Gigantocellular reticular nuclei, medullary
nTPM: 873.9
2462 Male, age 74, both hemispheres 1110.0
1876 Female, age 85, both hemispheres 926.0
2387 Female, age 91, both hemispheres 917.8
2022 Male, age 76, right hemisphere 860.7
2310 Male, age 80, both hemispheres 843.1
2314 Male, age 61, both hemispheres 586.1
Gigantocellular reticular nuclei, pars
nTPM: 1071.4
2168 Male, age 76, both hemispheres 1751.8
2084 Female, age 85, both hemispheres 1068.7
2706 Male, age 80, both hemispheres 874.3
2330 Male, age 80, both hemispheres 866.6
2336 Male, age 61, both hemispheres 795.8
Inferior olive
nTPM: 922.9
2563 Male, age 74, both hemispheres 1334.4
2085 Female, age 85, both hemispheres 1146.1
2379 Male, age 80, both hemispheres 844.4
2628 Female, age 91, both hemispheres 807.8
2178 Male, age 61, both hemispheres 481.9
Kolliker-Fuse nucleus
nTPM: 1012.5
2163 Male, age 80, both hemispheres 1321.9
2315 Male, age 76, right hemisphere 910.1
2793 Female, age 91, left hemisphere 805.6
Lateral lemniscal nuclei
nTPM: 1251.2
2169 Male, age 76, both hemispheres 1779.4
2036 Male, age 80, both hemispheres 1625.2
2746 Female, age 85, left hemisphere 1174.1
2453 Male, age 74, right hemisphere 880.1
2320 Female, age 91, left hemisphere 797.2
Lateral medullary reticular nucleus
nTPM: 818.5
2044 Male, age 76, both hemispheres 1331.4
2804 Female, age 91, both hemispheres 985.1
2190 Female, age 85, both hemispheres 787.1
2852 Male, age 80, both hemispheres 644.0
2305 Male, age 74, both hemispheres 617.5
2374 Male, age 61, both hemispheres 546.2
Lateral parabrachial nucleus
nTPM: 998.6
2139 Female, age 85, right hemisphere 1523.0
2013 Male, age 80, both hemispheres 986.3
2790 Male, age 61, both hemispheres 773.7
2792 Male, age 76, both hemispheres 711.2
Lateral vestibular nucleus
nTPM: 1050.2
2184 Male, age 76, both hemispheres 1344.6
2311 Male, age 80, both hemispheres 755.7
Locus coeruleus
nTPM: 915.4
2123 Female, age 91, both hemispheres 1068.7
2317 Female, age 72, unknown 1023.5
2014 Male, age 55, unknown 970.8
1980 Male, age 76, both hemispheres 860.4
2720 Male, age 74, both hemispheres 846.0
2788 Male, age 74, unknown 822.5
2162 Male, age 80, both hemispheres 816.1
Medial olivary nucleus
nTPM: 585.1
2138 Female, age 91, both hemispheres 953.2
2851 Male, age 80, both hemispheres 612.9
1962 Male, age 76, both hemispheres 549.1
1943 Male, age 61, both hemispheres 225.0
Medial parabrachial nucleus
nTPM: 870.7
2854 Male, age 80, both hemispheres 1000.8
2156 Male, age 61, both hemispheres 914.5
2786 Male, age 76, both hemispheres 814.9
2463 Female, age 85, right hemisphere 812.9
2170 Female, age 91, both hemispheres 810.2
Medial periolivary nuclei
nTPM: 1197.4
2063 Male, age 76, both hemispheres 1875.6
2171 Female, age 85, both hemispheres 1694.0
2791 Male, age 74, right hemisphere 1076.3
2081 Male, age 80, both hemispheres 691.5
2458 Female, age 91, both hemispheres 649.9
Medial vestibular nucleus
nTPM: 1047.5
2134 Male, age 76, both hemispheres 1236.4
2093 Male, age 80, both hemispheres 1109.1
2624 Male, age 61, both hemispheres 1049.5
2743 Female, age 85, both hemispheres 1037.5
2803 Female, age 91, both hemispheres 994.9
2801 Male, age 74, both hemispheres 857.7
Motor facial nucleus
nTPM: 1193.6
2062 Male, age 76, both hemispheres 2046.9
2795 Female, age 91, both hemispheres 1195.2
2327 Male, age 80, both hemispheres 1120.4
2365 Male, age 74, right hemisphere 1028.2
2697 Female, age 85, both hemispheres 908.4
2126 Male, age 61, both hemispheres 862.3
Motor hypoglossal nucleus
nTPM: 813.3
2125 Female, age 91, both hemispheres 1059.2
2461 Male, age 61, both hemispheres 932.9
2132 Female, age 85, both hemispheres 888.4
2182 Male, age 80, both hemispheres 634.1
2277 Male, age 76, both hemispheres 551.9
Motor trigeminal nucleus
nTPM: 865.0
2079 Male, age 80, both hemispheres 1362.9
2309 Male, age 76, both hemispheres 836.9
2560 Male, age 74, both hemispheres 780.3
2335 Male, age 61, both hemispheres 769.0
2321 Female, age 91, both hemispheres 576.0
Nuclei of the trapezoid body
nTPM: 1734.6
2159 Male, age 61, both hemispheres 2962.5
1983 Male, age 76, both hemispheres 1881.2
2735 Female, age 85, both hemispheres 1776.2
2166 Male, age 80, both hemispheres 1119.7
2368 Female, age 91, both hemispheres 933.6
Nucleus ambiguus
nTPM: 923.1
2096 Female, age 85, both hemispheres 1083.4
2071 Male, age 76, both hemispheres 762.7
Nucleus cuneatus
nTPM: 701.5
2564 Male, age 74, both hemispheres 975.6
2131 Male, age 76, both hemispheres 894.2
2376 Male, age 61, both hemispheres 810.4
2100 Male, age 76, both hemispheres 759.0
2562 Male, age 61, both hemispheres 739.3
2805 Female, age 91, both hemispheres 727.8
2381 Male, age 80, both hemispheres 511.4
2380 Male, age 80, both hemispheres 483.6
2808 Female, age 85, both hemispheres 412.4
Nucleus gracilis
nTPM: 537.6
2627 Male, age 74, both hemispheres 860.3
2299 Female, age 85, both hemispheres 414.0
2382 Male, age 80, both hemispheres 338.4
Nucleus raphe magnus
nTPM: 1554.6
2160 Male, age 61, both hemispheres 3313.7
2172 Female, age 85, both hemispheres 1611.5
2455 Male, age 74, both hemispheres 1318.9
2328 Male, age 80, both hemispheres 1223.7
2051 Male, age 76, both hemispheres 1186.1
2459 Female, age 91, both hemispheres 673.6
Nucleus raphe obscurus
nTPM: 628.5
2800 Male, age 61, midline 742.1
2845 Female, age 85, midline 740.5
2142 Male, age 76, midline 403.1
Nucleus raphe pallidus
nTPM: 675.6
2183 Male, age 80, midline 810.1
1924 Male, age 61, midline 807.8
2145 Male, age 76, midline 408.9
Nucleus tractus solitarii
nTPM: 621.8
2144 Female, age 91, right hemisphere 842.0
2656 Male, age 76, both hemispheres 676.0
2191 Female, age 85, both hemispheres 586.7
2307 Male, age 80, both hemispheres 382.5
Paramedian reticular nucleus
nTPM: 1061.9
2050 Female, age 85, both hemispheres 1358.4
2057 Male, age 80, both hemispheres 1119.9
2313 Male, age 61, both hemispheres 1109.3
2052 Male, age 76, both hemispheres 659.8
Parvicellular reticular nuclei
nTPM: 937.0
2095 Male, age 76, both hemispheres 1045.4
2119 Male, age 80, both hemispheres 933.4
2558 Male, age 74, both hemispheres 832.4
Parvicellular reticular nuclei, medullary
nTPM: 907.8
2091 Female, age 85, both hemispheres 1063.6
2189 Female, age 91, both hemispheres 898.6
2181 Male, age 80, left hemisphere 761.2
Pedunculopontine tegmental nucleus
nTPM: 849.0
1921 Female, age 85, both hemispheres 1046.9
2334 Male, age 80, both hemispheres 848.5
2338 Male, age 61, both hemispheres 651.5
Peritrigeminal nucleus
nTPM: 1180.9
2136 Male, age 76, both hemispheres 1221.3
2179 Male, age 61, both hemispheres 1214.3
2067 Female, age 85, both hemispheres 1107.2
Pontine nuclei
nTPM: 1438.5
2727 Male, age 61, right hemisphere 2910.2
2787 Female, age 85, both hemispheres 1794.5
1863 Male, age 55, unknown 1760.8
1968 Male, age 76, left hemisphere 1610.2
2109 Female, age 72, unknown 1156.5
2115 Male, age 80, left hemisphere 832.1
2319 Female, age 91, both hemispheres 759.8
2454 Male, age 74, left hemisphere 683.8
Pontine raphe nucleus
nTPM: 1131.4
2122 Female, age 85, midline 1396.5
2853 Male, age 76, midline 866.4
Posteroventral cochlear nucleus
nTPM: 757.9
2752 Female, age 85, both hemispheres 1093.9
2070 Male, age 76, both hemispheres 831.5
2371 Male, age 61, both hemispheres 759.4
2135 Female, age 91, both hemispheres 599.1
2341 Male, age 80, both hemispheres 505.6
Prepositus hypoglossal nucleus
nTPM: 919.9
2855 Female, age 85, right hemisphere 969.6
2086 Male, age 80, both hemispheres 870.3
Principal sensory trigeminal nucleus
nTPM: 1561.9
2158 Male, age 61, both hemispheres 2806.8
2008 Male, age 80, left hemisphere 1580.1
2324 Male, age 76, both hemispheres 1207.5
2367 Female, age 91, left hemisphere 653.2
Reticular pontine nucleus, caudal
nTPM: 1004.4
2092 Male, age 76, both hemispheres 1462.4
2332 Male, age 80, right hemisphere 1328.5
2457 Female, age 91, both hemispheres 713.1
2559 Male, age 74, both hemispheres 513.6
Reticular pontine nucleus, oral
nTPM: 881.5
2012 Female, age 85, both hemispheres 1244.3
1939 Male, age 80, both hemispheres 854.8
2167 Male, age 76, both hemispheres 847.8
2366 Female, age 91, both hemispheres 773.3
2361 Male, age 74, both hemispheres 687.5
Reticulotegmental nucleus
nTPM: 933.1
2325 Male, age 76, both hemispheres 1234.8
2333 Male, age 80, both hemispheres 971.9
2322 Female, age 91, both hemispheres 817.7
2452 Male, age 74, both hemispheres 707.8
Spinal trigeminal nucleus, caudal
nTPM: 799.9
2390 Female, age 91, both hemispheres 1143.0
2447 Male, age 76, both hemispheres 901.9
2308 Male, age 80, both hemispheres 676.4
2642 Male, age 74, both hemispheres 670.3
2312 Male, age 61, both hemispheres 608.0
Spinal trigeminal nucleus, interpolar
nTPM: 1347.0
2625 Male, age 61, both hemispheres 2374.0
2066 Male, age 76, right hemisphere 1713.3
2033 Male, age 80, both hemispheres 921.9
2389 Female, age 91, both hemispheres 905.6
2386 Female, age 85, both hemispheres 820.2
Spinal trigeminal nucleus, oral
nTPM: 936.8
2737 Female, age 85, both hemispheres 1107.9
2164 Male, age 80, both hemispheres 948.5
1978 Male, age 76, both hemispheres 754.2
Spinal vestibular nucleus
nTPM: 878.5
2186 Female, age 91, both hemispheres 968.7
2806 Female, age 85, both hemispheres 947.1
2780 Male, age 80, both hemispheres 937.2
2748 Male, age 76, both hemispheres 901.8
2796 Male, age 61, both hemispheres 867.1
2384 Male, age 74, both hemispheres 649.1
Subcoeruleus area
nTPM: 951.1
2089 Male, age 76, left hemisphere 1248.1
1958 Male, age 80, both hemispheres 1164.1
2323 Female, age 91, left hemisphere 835.2
2451 Male, age 74, both hemispheres 756.9
2369 Female, age 85, left hemisphere 751.1
Superior olive
nTPM: 1152.6
1875 Female, age 85, both hemispheres 1522.0
2020 Male, age 76, both hemispheres 1332.8
2329 Male, age 80, right hemisphere 1099.5
2364 Male, age 74, right hemisphere 1083.1
2561 Female, age 91, both hemispheres 725.7
Superior vestibular nucleus
nTPM: 843.4
2061 Male, age 76, both hemispheres 888.7
2015 Male, age 80, both hemispheres 878.4
2383 Male, age 74, both hemispheres 763.3
Ventral medullary reticular nucleus
nTPM: 772.4
2060 Male, age 76, both hemispheres 823.1
2372 Male, age 61, both hemispheres 721.6
Ventral periolivary nuclei
nTPM: 1376.9
2130 Female, age 85, both hemispheres 1811.7
2165 Male, age 80, both hemispheres 1663.0
2023 Male, age 76, both hemispheres 1250.4
2794 Female, age 91, left hemisphere 782.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 933.4
1986 Male, age 76, both hemispheres 1197.7
2302 Female, age 91, both hemispheres 1095.4
2741 Female, age 85, both hemispheres 1035.1
2180 Male, age 61, both hemispheres 701.8
2118 Male, age 80, both hemispheres 637.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 946.4
1959 Male, age 76, both hemispheres 1368.0
2161 Male, age 80, both hemispheres 1041.2
2449 Male, age 74, both hemispheres 974.1
2840 Female, age 85, both hemispheres 956.9
2456 Female, age 91, both hemispheres 761.2
2359 Male, age 61, both hemispheres 576.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1024.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 503.9
FF:10182-103D2 60 years, female 649.9
FF:10165-103B3 76 years, female 357.9
Medulla oblongata
Scaled Tags Per Million: 354.3
FF:10038-101F2 18-64 years, mixed 493.2
FF:10174-103C3 60 years, female 298.8
FF:10155-103A2 76 years, female 271.0
Pons
Scaled Tags Per Million: 1024.7
FF:10033-101E6 18-54 years, mixed 1024.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1635.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1594.4
Samples: 4

Max nTPM: 1784.6
Min nTPM: 1316.2
Sample A Female 1316.2
Sample B Female 1494.9
Sample C Male 1784.6
Sample D Male 1782.0
Pons
nTPM: 1635.2
Samples: 4

Max nTPM: 1994.6
Min nTPM: 1261.6
Sample A Female 1727.4
Sample B Female 1261.6
Sample C Male 1557.1
Sample D Male 1994.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2236.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2236.9
Samples: 4

Max nTPM: 2359.3
Min nTPM: 1991.2
Sample A Male 2307.8
Sample B Male 1991.2
Sample C Female 2359.3
Sample D Female 2289.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.1
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 12.9
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 9.1
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 5.4
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 4.6
Pons
Expression energy: 9.6
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 12.9
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 11.5
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 4.4
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 3.4

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