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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1185.7 nTPM
HPA Brain:2511.0 nTPM
GTEx:1185.7 nTPM
FANTOM5:5299.9 Scaled Tags Per Million
Pig:489.1 nTPM
Mouse:277.8 nTPM
Allen mouse:9.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057100Antibody CAB002053Antibody CAB040560
Glial cells HighHighHigh
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2511.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1022.2
2481 Female, age 94, left hemisphere 1498.0
1781 Male, age 74, unknown 1422.7
2289 Male, age 61, right hemisphere 1343.7
2288 Male, age 75, left hemisphere 1152.7
2846 Female, age 79, unknown 912.8
2290 Female, age 72, unknown 739.9
1854 Male, age 80, left hemisphere 646.1
1857 Female, age 85, left hemisphere 461.4
Globus pallidus, externus
nTPM: 2207.9
1996 Male, age 80, right hemisphere 3023.8
2772 Female, age 79, unknown 2389.8
2646 Male, age 61, right hemisphere 2216.5
2395 Male, age 75, both hemispheres 1938.0
2567 Female, age 72, unknown 1471.3
Globus pallidus, internus
nTPM: 2511.0
2111 Female, age 85, right hemisphere 3221.5
2778 Female, age 91, both hemispheres 2977.3
2037 Male, age 80, right hemisphere 2645.0
2287 Male, age 75, right hemisphere 2468.8
1818 Male, age 74, unknown 2426.8
2566 Female, age 72, unknown 2307.3
2483 Female, age 94, right hemisphere 1530.5
Nucleus accumbens
nTPM: 1107.0
2391 Female, age 94, left hemisphere 2052.0
2698 Female, age 72, unknown 1544.3
2286 Male, age 75, left hemisphere 1280.3
2732 Male, age 80, right hemisphere 1223.5
2824 Male, age 61, right hemisphere 837.7
1806 Female, age 85, left hemisphere 790.4
1783 Male, age 74, unknown 746.2
1856 Female, age 91, right hemisphere 381.2
Nucleus basalis of Meynert
nTPM: 1123.3
2569 Male, age 61, both hemispheres 1922.8
2821 Male, age 75, both hemispheres 991.1
2484 Female, age 94, left hemisphere 791.1
2393 Male, age 80, right hemisphere 788.3
Nucleus of the diagonal band
nTPM: 454.4
1812 Female, age 91, both hemispheres 975.0
2029 Male, age 61, right hemisphere 375.0
1979 Male, age 74, unknown 350.3
2195 Female, age 85, both hemispheres 320.1
2775 Male, age 80, right hemisphere 251.6
Putamen
nTPM: 913.0
2482 Female, age 94, left hemisphere 1508.9
1829 Male, age 74, unknown 1234.6
1937 Female, age 91, right hemisphere 873.9
2647 Male, age 75, left hemisphere 868.2
2489 Female, age 72, unknown 861.2
2466 Female, age 79, unknown 681.3
1838 Male, age 80, right hemisphere 362.9
Septal nuclei
nTPM: 665.5
2629 Female, age 94, right hemisphere 1234.7
2394 Male, age 61, left hemisphere 917.7
2199 Male, age 80, right hemisphere 675.1
2009 Female, age 91, both hemispheres 586.0
2059 Female, age 85, both hemispheres 496.6
2031 Female, age 72, unknown 418.6
1960 Male, age 74, unknown 330.0
Stria terminalis, bed nucleus
nTPM: 609.6
1974 Female, age 91, both hemispheres 704.7
2201 Male, age 74, unknown 590.4
2486 Female, age 94, both hemispheres 533.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1185.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 882.9
Samples: 246

Max nTPM: 7931.1
Min nTPM: 128.6
Std nTPM: 730.6
Median nTPM: 719.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7931.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4363.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 3740.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 3346.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 3094.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 2759.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2569.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 2281.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2226.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2187.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2182.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 2047.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1938.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1931.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1868.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1839.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1798.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1774.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1771.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1753.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1723.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1710.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1605.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1538.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1537.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1460.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1436.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1430.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1385.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1361.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1341.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1327.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1324.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1322.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1318.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1296.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1280.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1261.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1229.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1223.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1207.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1154.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1146.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1144.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1141.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1136.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1135.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1115.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1089.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1085.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1055.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1055.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1053.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1052.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1042.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1027.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1022.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1004.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 998.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 995.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 987.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 984.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 983.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 980.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 970.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 969.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 968.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 961.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 960.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 960.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 954.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 954.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 952.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 951.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 943.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 940.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 925.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 912.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 911.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 910.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 909.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 908.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 904.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 887.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 885.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 880.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 877.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 863.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 862.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 853.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 850.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 840.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 827.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 818.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 817.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 802.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 800.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 799.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 797.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 793.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 792.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 777.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 776.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 773.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 771.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 766.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 764.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 763.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 759.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 753.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 750.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 748.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 745.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 745.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 745.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 744.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 738.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 737.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 735.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 733.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 733.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 733.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 723.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 714.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 704.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 702.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 695.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 694.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 693.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 692.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 692.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 688.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 683.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 682.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 681.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 680.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 679.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 676.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 675.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 673.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 670.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 665.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 660.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 659.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 655.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 647.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 637.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 633.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 633.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 632.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 618.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 616.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 615.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 602.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 597.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 585.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 582.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 580.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 579.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 568.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 565.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 558.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 554.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 546.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 544.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 543.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 543.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 540.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 537.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 534.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 528.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 521.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 517.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 517.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 514.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 512.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 511.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 510.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 510.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 510.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 510.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 508.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 506.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 496.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 494.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 488.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 486.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 484.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 482.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 479.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 475.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 473.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 473.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 473.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 470.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 468.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 467.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 465.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 464.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 460.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 455.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 453.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 453.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 442.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 439.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 432.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 432.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 432.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 432.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 424.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 420.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 420.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 413.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 403.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 400.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 398.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 395.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 394.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 391.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 381.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 379.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 379.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 377.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 375.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 370.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 350.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 341.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 340.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 320.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 314.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 310.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 309.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 308.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 306.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 300.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 290.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 284.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 273.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 271.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 268.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 266.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 258.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 250.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 225.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 210.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 128.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 666.6
Samples: 246

Max nTPM: 3564.2
Min nTPM: 98.7
Std nTPM: 605.5
Median nTPM: 464.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3564.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3277.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 3197.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 3177.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 3051.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2851.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 2755.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2461.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 2403.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2403.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 2030.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1956.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1950.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1912.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1895.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1816.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1780.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1666.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1643.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1575.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1447.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1371.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1358.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1343.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1301.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1276.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1276.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1272.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1223.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1210.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1207.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1131.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1127.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1102.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1040.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1013.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1012.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 998.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 959.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 951.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 946.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 930.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 927.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 921.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 906.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 904.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 902.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 895.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 887.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 865.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 856.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 854.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 846.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 846.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 842.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 838.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 825.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 822.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 807.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 804.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 801.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 785.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 784.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 782.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 773.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 763.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 760.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 745.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 730.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 717.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 698.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 696.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 681.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 679.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 679.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 669.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 668.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 667.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 664.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 657.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 648.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 647.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 642.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 639.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 619.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 617.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 614.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 610.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 609.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 606.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 606.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 602.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 591.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 583.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 580.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 576.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 569.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 559.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 559.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 553.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 552.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 548.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 544.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 541.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 539.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 537.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 528.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 514.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 504.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 503.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 502.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 500.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 497.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 492.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 485.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 483.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 480.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 479.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 474.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 471.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 470.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 469.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 465.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 463.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 460.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 454.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 453.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 452.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 452.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 451.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 448.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 447.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 447.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 443.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 440.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 432.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 430.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 425.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 423.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 421.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 417.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 416.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 413.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 412.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 407.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 407.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 406.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 406.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 404.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 401.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 393.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 388.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 387.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 384.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 381.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 377.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 377.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 376.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 375.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 374.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 373.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 366.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 362.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 357.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 355.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 354.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 353.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 353.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 346.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 343.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 338.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 336.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 331.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 331.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 331.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 325.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 323.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 320.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 319.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 315.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 313.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 311.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 307.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 307.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 305.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 303.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 300.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 297.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 292.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 291.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 289.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 285.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 285.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 284.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 279.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 276.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 274.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 273.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 272.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 269.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 267.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 264.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 261.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 260.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 258.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 258.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 255.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 255.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 251.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 248.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 246.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 244.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 244.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 243.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 240.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 237.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 237.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 234.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 220.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 219.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 217.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 210.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 206.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 202.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 199.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 192.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 192.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 190.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 188.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 184.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 182.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 180.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 177.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 176.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 175.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 174.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 172.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 161.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 156.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 150.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 141.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 136.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 132.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 126.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 115.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 98.7
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Brain - Putamen (basal ganglia)
Average nTPM: 1185.7
Samples: 205

Max nTPM: 6950.2
Min nTPM: 186.2
Std nTPM: 770.5
Median nTPM: 1024.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6950.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 4647.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3783.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3779.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3321.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 3165.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 3134.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3093.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2991.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 2829.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 2640.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2537.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2398.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2386.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 2330.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 2186.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2005.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1974.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1938.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1902.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1866.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1841.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1725.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1717.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1682.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1642.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1626.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1610.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1605.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1588.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1587.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1576.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1555.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1509.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1496.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1461.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1460.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1456.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1437.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1431.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1427.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1423.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1419.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1412.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1406.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1396.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1395.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1383.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1373.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1365.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1360.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1356.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1351.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1349.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1341.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1335.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1315.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1305.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1304.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1293.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1288.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1282.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1280.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1279.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1273.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1273.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1267.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1260.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1260.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1248.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1221.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1218.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1214.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1212.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1205.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1201.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1191.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1176.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1168.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1159.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1157.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1157.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1147.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1142.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1140.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1136.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1127.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1127.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1122.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1122.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1114.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1104.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1092.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1078.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1075.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1072.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1069.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1044.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1036.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1036.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1026.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1026.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1024.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1024.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1021.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1015.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1005.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 995.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 983.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 978.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 977.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 975.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 969.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 951.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 949.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 948.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 944.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 943.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 935.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 931.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 926.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 910.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 904.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 896.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 895.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 888.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 887.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 883.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 873.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 869.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 865.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 851.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 843.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 842.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 837.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 835.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 831.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 817.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 814.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 801.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 792.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 785.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 785.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 780.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 771.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 770.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 760.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 757.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 754.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 752.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 750.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 738.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 734.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 734.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 733.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 728.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 721.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 721.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 719.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 716.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 714.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 705.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 703.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 702.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 701.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 700.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 697.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 694.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 692.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 669.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 657.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 640.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 623.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 620.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 619.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 617.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 615.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 614.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 607.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 596.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 593.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 584.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 583.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 567.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 566.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 562.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 562.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 556.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 550.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 541.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 534.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 523.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 515.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 480.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 476.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 474.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 456.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 444.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 432.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 397.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 393.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 383.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 341.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 272.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 186.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5299.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1001.8
FF:10164-103B2 76 years, female 1001.8
Nucleus accumbens
Scaled Tags Per Million: 2212.5
FF:10037-101F1 23-56 years, mixed 2212.5
Putamen
Scaled Tags Per Million: 959.5
FF:10176-103C5 60 years, female 959.5
Globus pallidus
Scaled Tags Per Million: 5299.9
FF:10161-103A8 76 years, female 5828.4
FF:10175-103C4 60 years, female 4771.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

489.1
Pig sample Sample description nTPM
Caudate
nTPM: 192.2
Samples: 4

Max nTPM: 207.0
Min nTPM: 180.8
Sample A Female 189.7
Sample B Female 180.8
Sample C Male 207.0
Sample D Male 191.4
Putamen
nTPM: 489.1
Samples: 4

Max nTPM: 738.3
Min nTPM: 250.9
Sample A Female 738.3
Sample B Female 250.9
Sample C Male 399.8
Sample D Male 567.4
Septum
nTPM: 275.0
Samples: 4

Max nTPM: 407.7
Min nTPM: 209.7
Sample A Female 261.6
Sample B Female 221.1
Sample C Male 209.7
Sample D Male 407.7
Ventral pallidum
nTPM: 390.9
Samples: 4

Max nTPM: 563.8
Min nTPM: 155.1
Sample A Female 155.1
Sample B Female 410.9
Sample C Male 433.8
Sample D Male 563.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 277.8
Samples: 4

Max nTPM: 306.9
Min nTPM: 250.4
Sample A Male 250.4
Sample B Male 270.6
Sample C Female 306.9
Sample D Female 283.1
Septum
nTPM: 234.8
Samples: 4

Max nTPM: 297.7
Min nTPM: 144.7
Sample A Male 144.7
Sample B Male 212.2
Sample C Female 284.6
Sample D Female 297.7
Ventral forebrain
nTPM: 183.5
Samples: 4

Max nTPM: 217.5
Min nTPM: 160.5
Sample A Male 160.5
Sample B Male 166.8
Sample C Female 217.5
Sample D Female 189.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.0
72182998 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 8.0
74357575 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 6.1
Pallidum
Expression energy: 9.2
72182998 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 9.2
74357575 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 8.4

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