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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:217.2 nTPM
HPA Brain:360.0 nTPM
GTEx:217.2 nTPM
FANTOM5:781.7 Scaled Tags Per Million
Pig:313.6 nTPM
Mouse:791.7 nTPM
Allen mouse:24.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035738Antibody HPA035739
Glial cells LowLow
Neuronal cells HighNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

360.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 276.5
2288 Male, age 75, left hemisphere 320.0
2481 Female, age 94, left hemisphere 317.3
2846 Female, age 79, unknown 308.4
1857 Female, age 85, left hemisphere 279.6
1781 Male, age 74, unknown 272.3
2290 Female, age 72, unknown 269.6
1854 Male, age 80, left hemisphere 265.4
2289 Male, age 61, right hemisphere 179.2
Globus pallidus, externus
nTPM: 291.0
2395 Male, age 75, both hemispheres 379.2
2772 Female, age 79, unknown 371.0
1996 Male, age 80, right hemisphere 304.2
2567 Female, age 72, unknown 212.8
2646 Male, age 61, right hemisphere 187.7
Globus pallidus, internus
nTPM: 317.7
2287 Male, age 75, right hemisphere 448.3
2778 Female, age 91, both hemispheres 366.7
2483 Female, age 94, right hemisphere 351.0
1818 Male, age 74, unknown 290.2
2037 Male, age 80, right hemisphere 274.5
2111 Female, age 85, right hemisphere 259.9
2566 Female, age 72, unknown 233.5
Nucleus accumbens
nTPM: 293.5
2391 Female, age 94, left hemisphere 335.4
2286 Male, age 75, left hemisphere 329.2
1856 Female, age 91, right hemisphere 322.3
2824 Male, age 61, right hemisphere 305.3
2698 Female, age 72, unknown 301.7
1783 Male, age 74, unknown 272.3
1806 Female, age 85, left hemisphere 269.9
2732 Male, age 80, right hemisphere 211.7
Nucleus basalis of Meynert
nTPM: 246.6
2821 Male, age 75, both hemispheres 296.0
2484 Female, age 94, left hemisphere 258.6
2393 Male, age 80, right hemisphere 244.2
2569 Male, age 61, both hemispheres 187.7
Nucleus of the diagonal band
nTPM: 360.0
1812 Female, age 91, both hemispheres 435.0
2775 Male, age 80, right hemisphere 395.7
2029 Male, age 61, right hemisphere 382.1
2195 Female, age 85, both hemispheres 332.6
1979 Male, age 74, unknown 254.5
Putamen
nTPM: 255.2
2466 Female, age 79, unknown 302.0
2482 Female, age 94, left hemisphere 285.8
1937 Female, age 91, right hemisphere 281.3
1838 Male, age 80, right hemisphere 265.3
1829 Male, age 74, unknown 260.7
2647 Male, age 75, left hemisphere 228.4
2489 Female, age 72, unknown 163.1
Septal nuclei
nTPM: 313.4
2031 Female, age 72, unknown 461.0
1960 Male, age 74, unknown 367.6
2009 Female, age 91, both hemispheres 324.7
2629 Female, age 94, right hemisphere 319.9
2394 Male, age 61, left hemisphere 269.2
2199 Male, age 80, right hemisphere 228.6
2059 Female, age 85, both hemispheres 222.8
Stria terminalis, bed nucleus
nTPM: 303.0
1974 Female, age 91, both hemispheres 364.0
2486 Female, age 94, both hemispheres 298.3
2201 Male, age 74, unknown 246.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 205.1
Samples: 246

Max nTPM: 430.5
Min nTPM: 119.1
Std nTPM: 44.4
Median nTPM: 198.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 430.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 359.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 335.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 333.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 321.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 316.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 315.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 305.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 300.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 298.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 297.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 297.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 292.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 288.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 278.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 274.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 271.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 269.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 268.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 268.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 267.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 267.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 266.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 266.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 261.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 260.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 257.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 256.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 253.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 253.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 250.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 250.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 249.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 248.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 242.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 242.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 242.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 241.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 241.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 241.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 240.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 240.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 239.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 239.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 239.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 238.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 237.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 237.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 235.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 234.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 234.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 233.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 232.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 232.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 232.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 232.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 231.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 231.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 231.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 230.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 229.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 229.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 227.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 227.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 225.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 224.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 221.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 221.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 221.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 221.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 220.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 217.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 217.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 217.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 217.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 217.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 216.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 216.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 215.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 215.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 214.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 214.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 214.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 213.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 213.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 212.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 212.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 211.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 211.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 211.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 210.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 210.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 209.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 208.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 208.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 208.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 208.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 208.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 208.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 207.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 207.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 207.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 207.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 206.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 206.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 205.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 205.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 205.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 204.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 204.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 204.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 203.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 203.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 201.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 201.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 201.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 200.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 199.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 199.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 198.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 198.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 198.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 198.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 197.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 197.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 197.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 197.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 195.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 195.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 195.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 194.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 194.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 194.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 194.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 194.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 194.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 193.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 192.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 191.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 190.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 190.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 189.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 189.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 189.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 189.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 189.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 188.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 187.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 187.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 187.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 186.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 186.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 185.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 185.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 185.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 185.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 184.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 184.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 183.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 183.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 183.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 182.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 182.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 181.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 181.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 181.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 180.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 180.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 179.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 179.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 179.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 179.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 178.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 176.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 176.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 176.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 176.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 175.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 175.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 175.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 174.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 174.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 173.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 173.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 173.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 172.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 171.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 171.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 170.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 170.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 170.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 169.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 169.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 169.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 168.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 168.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 167.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 167.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 166.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 166.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 165.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 165.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 165.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 164.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 164.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 162.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 162.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 162.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 162.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 161.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 161.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 161.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 159.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 159.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 158.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 158.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 156.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 155.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 153.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 152.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 152.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 150.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 149.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 149.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 148.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 144.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 142.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 142.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 140.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 140.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 137.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 132.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 129.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 128.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 123.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 120.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 119.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 217.2
Samples: 246

Max nTPM: 474.0
Min nTPM: 90.3
Std nTPM: 55.8
Median nTPM: 213.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 474.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 360.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 358.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 354.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 345.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 344.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 342.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 340.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 332.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 328.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 326.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 324.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 313.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 312.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 311.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 304.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 304.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 300.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 293.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 291.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 291.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 288.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 287.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 286.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 283.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 282.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 282.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 282.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 281.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 278.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 278.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 277.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 275.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 270.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 270.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 270.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 269.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 269.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 266.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 265.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 265.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 264.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 264.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 263.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 259.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 259.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 258.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 258.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 257.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 256.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 256.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 255.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 255.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 254.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 254.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 254.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 253.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 252.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 252.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 251.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 251.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 251.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 251.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 250.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 248.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 247.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 247.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 246.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 246.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 246.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 245.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 245.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 245.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 244.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 244.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 244.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 244.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 243.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 242.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 241.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 240.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 240.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 238.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 237.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 237.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 237.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 237.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 236.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 236.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 236.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 236.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 236.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 236.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 234.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 234.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 233.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 233.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 231.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 231.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 230.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 230.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 229.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 229.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 229.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 227.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 226.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 225.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 224.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 224.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 224.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 224.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 223.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 221.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 221.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 221.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 221.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 220.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 220.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 218.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 215.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 215.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 214.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 213.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 213.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 213.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 212.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 211.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 211.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 210.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 209.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 209.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 208.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 208.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 207.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 206.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 206.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 205.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 205.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 204.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 204.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 203.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 203.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 202.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 201.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 200.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 200.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 200.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 196.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 196.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 196.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 195.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 195.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 194.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 194.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 192.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 191.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 191.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 191.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 191.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 191.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 190.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 190.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 189.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 189.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 188.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 188.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 186.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 186.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 185.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 185.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 185.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 184.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 184.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 184.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 184.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 183.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 182.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 181.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 181.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 181.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 180.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 180.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 179.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 179.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 178.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 178.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 177.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 176.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 176.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 175.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 174.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 173.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 172.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 172.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 171.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 171.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 168.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 168.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 167.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 166.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 166.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 165.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 165.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 164.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 163.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 163.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 162.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 162.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 162.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 160.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 160.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 160.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 158.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 158.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 158.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 157.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 156.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 156.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 154.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 154.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 154.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 154.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 153.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 153.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 151.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 150.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 147.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 147.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 145.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 144.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 140.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 137.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 133.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 129.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 125.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 125.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 123.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 121.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 119.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 112.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 112.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 112.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 109.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 104.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 95.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 90.3
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Brain - Putamen (basal ganglia)
Average nTPM: 216.4
Samples: 205

Max nTPM: 402.1
Min nTPM: 117.4
Std nTPM: 45.6
Median nTPM: 211.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 402.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 399.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 358.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 338.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 315.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 314.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 313.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 304.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 303.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 302.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 299.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 294.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 293.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 289.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 287.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 287.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 285.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 284.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 277.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 276.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 273.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 271.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 267.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 264.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 263.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 261.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 261.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 259.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 257.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 257.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 255.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 253.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 253.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 252.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 251.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 251.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 250.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 249.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 249.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 249.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 248.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 248.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 248.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 248.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 246.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 246.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 245.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 245.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 245.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 242.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 242.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 242.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 241.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 241.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 240.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 239.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 238.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 238.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 237.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 237.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 237.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 237.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 236.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 236.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 235.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 234.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 234.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 233.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 230.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 229.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 228.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 227.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 227.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 227.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 226.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 225.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 225.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 224.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 224.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 223.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 223.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 221.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 221.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 221.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 220.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 220.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 220.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 219.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 218.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 218.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 217.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 217.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 216.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 215.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 215.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 213.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 212.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 211.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 211.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 211.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 211.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 211.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 211.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 211.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 210.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 210.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 210.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 210.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 210.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 209.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 209.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 207.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 207.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 207.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 205.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 203.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 203.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 203.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 203.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 203.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 202.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 202.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 201.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 201.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 200.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 200.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 199.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 199.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 199.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 198.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 198.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 198.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 197.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 196.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 196.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 196.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 194.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 193.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 193.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 193.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 192.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 191.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 190.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 189.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 188.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 188.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 187.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 187.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 186.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 185.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 185.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 184.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 183.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 183.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 182.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 181.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 181.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 181.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 181.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 181.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 180.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 179.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 179.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 177.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 176.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 176.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 175.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 175.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 175.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 175.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 174.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 173.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 170.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 170.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 170.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 170.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 170.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 169.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 169.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 168.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 168.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 168.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 168.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 167.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 167.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 165.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 162.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 162.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 161.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 160.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 160.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 159.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 156.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 153.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 153.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 152.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 152.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 150.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 149.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 145.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 138.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 136.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 133.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 132.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

781.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 533.2
FF:10164-103B2 76 years, female 533.2
Nucleus accumbens
Scaled Tags Per Million: 696.0
FF:10037-101F1 23-56 years, mixed 696.0
Putamen
Scaled Tags Per Million: 781.7
FF:10176-103C5 60 years, female 781.7
Globus pallidus
Scaled Tags Per Million: 480.7
FF:10161-103A8 76 years, female 537.7
FF:10175-103C4 60 years, female 423.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.6
Pig sample Sample description nTPM
Caudate
nTPM: 222.8
Samples: 4

Max nTPM: 235.5
Min nTPM: 214.7
Sample A Female 220.0
Sample B Female 214.7
Sample C Male 235.5
Sample D Male 221.0
Putamen
nTPM: 313.6
Samples: 4

Max nTPM: 448.8
Min nTPM: 239.0
Sample A Female 292.8
Sample B Female 239.0
Sample C Male 448.8
Sample D Male 273.8
Septum
nTPM: 277.6
Samples: 4

Max nTPM: 335.1
Min nTPM: 244.4
Sample A Female 269.5
Sample B Female 244.4
Sample C Male 335.1
Sample D Male 261.4
Ventral pallidum
nTPM: 258.3
Samples: 4

Max nTPM: 299.1
Min nTPM: 232.5
Sample A Female 232.5
Sample B Female 263.8
Sample C Male 299.1
Sample D Male 237.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

791.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 727.6
Samples: 4

Max nTPM: 746.0
Min nTPM: 708.2
Sample A Male 746.0
Sample B Male 708.2
Sample C Female 710.9
Sample D Female 745.1
Septum
nTPM: 791.7
Samples: 4

Max nTPM: 839.5
Min nTPM: 729.0
Sample A Male 768.8
Sample B Male 839.5
Sample C Female 829.4
Sample D Female 729.0
Ventral forebrain
nTPM: 776.4
Samples: 4

Max nTPM: 826.0
Min nTPM: 743.9
Sample A Male 743.9
Sample B Male 773.6
Sample C Female 826.0
Sample D Female 762.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 24.2
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 24.5
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 23.9
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 22.4
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 19.5
Pallidum
Expression energy: 22.1
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 22.2
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 22.1
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 20.4
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 16.4

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