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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:298.0 nTPM
GTEx:298.0 nTPM
FANTOM5:406.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003001Antibody CAB000109
Squamous epithelial cells Not detectedNot detected


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

298.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 298.0
Samples: 156

Max nTPM: 1122.2
Min nTPM: 80.4
Std nTPM: 162.5
Median nTPM: 272.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1122.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 913.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 908.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 820.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 672.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 637.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 622.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 618.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 613.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 599.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 541.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 537.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 527.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 518.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 507.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 477.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 463.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 461.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 458.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 453.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 445.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 443.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 432.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 411.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 407.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 400.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 400.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 398.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 389.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 388.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 386.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 382.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 374.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 369.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 359.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 356.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 356.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 354.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 353.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 353.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 352.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 345.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 342.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 341.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 341.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 340.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 340.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 337.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 336.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 333.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 332.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 330.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 330.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 322.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 320.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 318.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 315.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 309.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 309.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 303.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 303.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 300.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 297.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 296.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 291.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 290.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 290.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 290.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 288.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 286.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 286.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 284.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 279.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 277.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 277.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 277.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 277.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 272.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 271.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 270.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 269.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 265.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 263.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 259.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 258.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 258.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 255.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 253.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 247.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 245.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 243.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 243.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 238.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 235.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 234.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 232.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 231.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 230.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 226.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 218.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 214.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 210.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 209.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 208.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 207.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 204.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 202.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 197.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 192.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 191.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 184.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 180.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 178.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 178.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 176.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 175.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 174.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 174.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 174.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 173.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 173.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 170.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 170.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 169.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 167.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 166.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 166.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 165.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 165.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 163.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 162.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 161.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 159.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 158.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 154.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 152.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 150.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 149.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 148.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 148.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 147.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 144.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 139.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 138.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 135.8
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 135.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 134.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 130.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 128.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 127.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 121.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 113.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 112.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 105.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 100.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 80.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

406.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 406.1
FF:10204-103F6 68 years, female 406.1

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