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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:7454.4 nTPM
HPA Brain:4505.1 nTPM
GTEx:7454.4 nTPM
FANTOM5:4870.0 Scaled Tags Per Million
Pig:4174.9 nTPM
Mouse:1231.1 nTPM
Allen mouse:14.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000572Antibody CAB016253Antibody CAB080180
Glial cells LowNot detectedMedium
Neuronal cells Not detectedNot detectedMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4505.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4505.1
2481 Female, age 94, left hemisphere 5925.8
2290 Female, age 72, unknown 4878.4
1854 Male, age 80, left hemisphere 4687.9
1857 Female, age 85, left hemisphere 4584.6
2289 Male, age 61, right hemisphere 4512.4
2846 Female, age 79, unknown 3995.8
2288 Male, age 75, left hemisphere 3877.8
1781 Male, age 74, unknown 3577.8
Globus pallidus, externus
nTPM: 4474.7
1996 Male, age 80, right hemisphere 6411.5
2646 Male, age 61, right hemisphere 5665.9
2772 Female, age 79, unknown 4909.0
2395 Male, age 75, both hemispheres 3302.3
2567 Female, age 72, unknown 2084.7
Globus pallidus, internus
nTPM: 4059.5
2483 Female, age 94, right hemisphere 6691.6
2037 Male, age 80, right hemisphere 5128.2
1818 Male, age 74, unknown 4753.4
2287 Male, age 75, right hemisphere 4573.9
2778 Female, age 91, both hemispheres 2965.3
2566 Female, age 72, unknown 2293.8
2111 Female, age 85, right hemisphere 2009.9
Nucleus accumbens
nTPM: 3714.2
2286 Male, age 75, left hemisphere 5030.6
1806 Female, age 85, left hemisphere 4116.2
2732 Male, age 80, right hemisphere 3974.4
2698 Female, age 72, unknown 3967.7
2391 Female, age 94, left hemisphere 3694.9
1783 Male, age 74, unknown 3264.6
1856 Female, age 91, right hemisphere 3183.5
2824 Male, age 61, right hemisphere 2481.6
Nucleus basalis of Meynert
nTPM: 3730.7
2569 Male, age 61, both hemispheres 5462.3
2393 Male, age 80, right hemisphere 3650.1
2484 Female, age 94, left hemisphere 3342.8
2821 Male, age 75, both hemispheres 2467.7
Nucleus of the diagonal band
nTPM: 3712.3
1812 Female, age 91, both hemispheres 5045.5
2775 Male, age 80, right hemisphere 3763.2
1979 Male, age 74, unknown 3570.7
2195 Female, age 85, both hemispheres 3537.6
2029 Male, age 61, right hemisphere 2644.4
Putamen
nTPM: 3685.4
2482 Female, age 94, left hemisphere 5480.2
1838 Male, age 80, right hemisphere 3921.5
2466 Female, age 79, unknown 3749.4
2489 Female, age 72, unknown 3657.3
1937 Female, age 91, right hemisphere 3472.1
1829 Male, age 74, unknown 3454.7
2647 Male, age 75, left hemisphere 2062.4
Septal nuclei
nTPM: 4232.7
2199 Male, age 80, right hemisphere 4920.9
2059 Female, age 85, both hemispheres 4759.3
2629 Female, age 94, right hemisphere 4544.7
2009 Female, age 91, both hemispheres 4468.0
2031 Female, age 72, unknown 4132.1
1960 Male, age 74, unknown 3971.8
2394 Male, age 61, left hemisphere 2832.3
Stria terminalis, bed nucleus
nTPM: 3429.4
1974 Female, age 91, both hemispheres 3892.1
2486 Female, age 94, both hemispheres 3248.5
2201 Male, age 74, unknown 3147.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7454.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 7342.4
Samples: 246

Max nTPM: 20431.3
Min nTPM: 907.2
Std nTPM: 3078.2
Median nTPM: 6842.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20431.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17568.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 17367.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 16960.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 15857.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 15290.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 14783.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 14657.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14438.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14187.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 14072.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 13577.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13515.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 13194.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 12734.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12516.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12448.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12424.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 12406.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 12196.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 12094.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12070.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11903.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11714.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11580.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11535.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11450.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 11358.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11338.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11278.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 10864.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 10755.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 10699.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 10571.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10463.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10406.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 10254.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 10103.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 10090.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 10059.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 10051.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 9851.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 9821.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9787.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9580.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 9463.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 9298.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9191.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9164.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 9117.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 9105.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 9037.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 9016.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8964.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8917.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 8850.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8776.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 8776.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8748.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 8730.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 8719.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 8582.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 8567.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 8533.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8521.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8511.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 8463.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 8461.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 8431.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 8413.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8255.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 8249.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8249.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 8235.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8216.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 8183.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 8172.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 8160.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 8139.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8087.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 8038.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7987.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 7958.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 7952.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7921.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 7872.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7851.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 7790.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7788.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7764.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7729.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7684.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 7621.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 7584.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 7563.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 7533.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7492.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 7491.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7470.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 7395.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7361.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7349.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7326.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7325.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 7301.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 7272.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 7261.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7259.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 7154.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 7136.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 7098.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7063.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 7056.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7033.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 7008.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 6980.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 6973.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 6956.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 6924.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 6889.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 6868.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 6866.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 6843.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 6841.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 6823.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 6772.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 6748.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 6703.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6674.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 6659.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 6651.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 6543.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 6521.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6520.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 6454.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6437.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6430.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 6407.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 6382.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 6369.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 6368.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 6317.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 6288.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 6271.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 6260.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 6258.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 6255.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 6245.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 6225.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6215.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6175.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6169.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 6156.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6150.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 6136.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6105.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6064.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6064.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 5986.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5953.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 5948.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 5946.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5915.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 5877.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 5875.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 5871.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 5866.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 5831.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 5823.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 5816.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5802.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5766.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5716.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5687.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5610.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5600.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 5597.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5591.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 5577.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5539.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5524.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 5507.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5469.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 5438.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5405.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5304.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5239.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5228.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 5224.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5218.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 5086.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 5064.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5036.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 4987.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 4976.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 4968.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4963.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 4951.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4929.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4895.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4888.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4810.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4794.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4781.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 4755.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4704.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4681.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 4618.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4612.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4570.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 4548.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 4524.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 4450.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 4355.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 4319.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 4305.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 4249.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 4209.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4188.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4161.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 4139.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4057.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 3942.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 3920.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3898.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3835.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3792.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3778.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 3621.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3556.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3530.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 3513.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3486.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 3437.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3264.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3055.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2971.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2909.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2809.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2776.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2553.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2168.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2003.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1581.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1473.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 907.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 6327.9
Samples: 246

Max nTPM: 17168.9
Min nTPM: 2035.1
Std nTPM: 2737.0
Median nTPM: 5743.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 17168.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 15033.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14445.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 14311.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 13911.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 13432.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13285.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13199.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 12993.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 12813.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 12670.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 12640.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 12630.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 12600.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 12544.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 11499.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 11476.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11110.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 10959.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 10946.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 10846.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 10637.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 10432.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 10137.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 10021.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9780.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9710.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 9684.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 9341.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 9326.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9278.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 9192.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9164.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 9126.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9059.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 9044.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9017.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8944.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 8890.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 8850.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8794.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 8705.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 8697.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 8544.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 8532.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8374.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 8374.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8183.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 8077.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 8047.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 8003.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 7924.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 7840.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 7721.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 7654.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 7603.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7590.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 7521.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 7507.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 7499.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 7442.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 7439.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 7365.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 7310.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 7292.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7271.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 7257.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 7245.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7245.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 7232.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 7219.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 7195.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 7167.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 7165.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 7161.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 7123.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 7012.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 6991.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 6964.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 6868.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 6794.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 6777.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 6727.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 6720.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 6707.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 6705.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 6664.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 6646.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 6630.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 6575.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 6548.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 6535.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 6529.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6506.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 6474.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 6461.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 6450.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 6430.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 6403.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 6384.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 6364.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 6355.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 6307.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 6304.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 6302.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 6244.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6223.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6084.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6070.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 6045.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 5942.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 5939.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 5900.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 5885.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 5862.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 5858.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5840.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5826.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 5795.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 5786.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 5769.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 5768.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 5745.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 5741.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 5719.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 5717.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 5713.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 5689.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 5637.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5636.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 5635.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 5629.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 5602.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 5595.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 5593.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 5492.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 5446.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 5425.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 5384.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5363.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5354.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5345.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5325.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5318.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 5312.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 5303.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 5254.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5198.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 5177.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 5161.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 5133.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 5122.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 5115.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 5097.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 5078.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 5074.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 5068.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 5057.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 5041.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 5025.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 5020.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 4996.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 4982.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 4980.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4967.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 4958.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 4952.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 4923.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 4910.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 4908.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 4808.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 4805.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 4779.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4767.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 4743.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4722.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 4719.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 4678.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 4664.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4660.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 4644.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 4633.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 4603.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 4558.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 4485.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 4469.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 4402.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 4391.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 4361.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 4326.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 4298.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 4255.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 4252.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 4238.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4235.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 4209.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 4193.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 4158.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 4108.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 4100.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 4089.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 4067.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 4045.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 4031.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 4027.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4019.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3994.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3951.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3892.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3869.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 3858.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 3845.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3779.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 3760.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 3751.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 3665.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 3659.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 3622.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 3581.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 3559.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 3495.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 3380.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 3302.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3267.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3260.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3260.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3199.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 3164.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 2995.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 2975.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2904.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 2869.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 2824.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2735.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 2728.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2708.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 2691.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 2616.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 2308.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2306.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 2299.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2297.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 2136.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 2090.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 2054.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 2035.1
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Brain - Putamen (basal ganglia)
Average nTPM: 7454.4
Samples: 205

Max nTPM: 23577.0
Min nTPM: 1276.3
Std nTPM: 3693.1
Median nTPM: 6987.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23577.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 20304.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 20067.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19673.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 19556.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 17633.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 16297.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15931.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15138.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14831.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14778.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14220.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13848.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13423.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 13405.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 13256.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12743.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 12703.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 12350.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12280.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 12144.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12124.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11982.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11787.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11555.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 11314.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11092.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 10852.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10330.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 9938.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9834.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9789.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9675.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9661.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9622.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 9610.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 9543.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9520.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 9485.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9417.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9337.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9315.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9312.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 9202.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9193.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9180.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 9146.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9096.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9050.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 9029.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8978.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 8924.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 8910.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8896.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8890.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8860.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8799.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 8736.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 8662.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 8656.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8618.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8615.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 8564.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8506.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8474.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 8445.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8381.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8373.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8323.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8312.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8260.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8229.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8166.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8061.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8041.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 8000.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7855.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7767.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 7739.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 7722.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7693.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7658.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 7621.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7609.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 7609.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7571.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7540.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7537.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7528.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 7505.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7449.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 7394.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7386.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 7339.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7259.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7255.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7218.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7218.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7185.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7085.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 7007.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 6996.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 6987.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6952.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 6944.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6936.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 6864.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6854.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 6843.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6832.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 6714.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 6606.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6591.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6576.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 6540.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6531.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6515.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 6494.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6454.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6445.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 6421.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 6281.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 6249.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 6227.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 6182.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6144.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6132.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 6124.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6025.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 6001.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 5987.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5949.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 5895.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5768.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 5679.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5653.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 5647.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 5639.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5632.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 5506.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 5445.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 5437.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 5415.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 5415.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 5373.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 5362.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 5276.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5260.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 5256.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5109.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 5042.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 4948.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 4938.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 4930.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4865.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4859.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 4843.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 4811.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4789.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4699.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 4693.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 4664.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 4660.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 4555.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 4511.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4364.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 4327.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 4324.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 4289.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 4157.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 4139.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4109.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4016.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 3983.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3909.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3908.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 3876.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3866.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3807.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 3774.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3739.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 3625.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 3565.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 3419.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3370.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 3272.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3146.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 3135.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3130.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 3015.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2995.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2994.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 2918.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2914.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2870.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 2628.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2605.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2521.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2508.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2234.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2173.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2109.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1811.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1704.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1276.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4870.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4870.0
FF:10164-103B2 76 years, female 4870.0
Nucleus accumbens
Scaled Tags Per Million: 3743.9
FF:10037-101F1 23-56 years, mixed 3743.9
Putamen
Scaled Tags Per Million: 3833.2
FF:10176-103C5 60 years, female 3833.2
Globus pallidus
Scaled Tags Per Million: 3868.4
FF:10175-103C4 60 years, female 4483.3
FF:10161-103A8 76 years, female 3253.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4174.9
Pig sample Sample description nTPM
Caudate
nTPM: 4174.9
Samples: 4

Max nTPM: 5359.6
Min nTPM: 2931.2
Sample A Female 2931.2
Sample B Female 4586.7
Sample C Male 5359.6
Sample D Male 3822.2
Putamen
nTPM: 3261.0
Samples: 4

Max nTPM: 4254.4
Min nTPM: 2715.2
Sample A Female 2715.2
Sample B Female 2808.4
Sample C Male 4254.4
Sample D Male 3266.1
Septum
nTPM: 3194.9
Samples: 4

Max nTPM: 3761.5
Min nTPM: 2544.7
Sample A Female 3060.8
Sample B Female 3412.5
Sample C Male 2544.7
Sample D Male 3761.5
Ventral pallidum
nTPM: 3124.6
Samples: 4

Max nTPM: 3274.8
Min nTPM: 2888.7
Sample A Female 3094.9
Sample B Female 3274.8
Sample C Male 2888.7
Sample D Male 3240.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1231.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1086.5
Samples: 4

Max nTPM: 1186.1
Min nTPM: 1016.2
Sample A Male 1056.4
Sample B Male 1087.1
Sample C Female 1016.2
Sample D Female 1186.1
Septum
nTPM: 1231.1
Samples: 4

Max nTPM: 1403.7
Min nTPM: 960.7
Sample A Male 960.7
Sample B Male 1403.7
Sample C Female 1322.5
Sample D Female 1237.5
Ventral forebrain
nTPM: 1036.6
Samples: 4

Max nTPM: 1225.5
Min nTPM: 926.0
Sample A Male 926.0
Sample B Male 993.7
Sample C Female 1225.5
Sample D Female 1001.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.5
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 20.0
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 16.8
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 8.9
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 3.7
Pallidum
Expression energy: 12.8
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 19.9
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 16.4
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 5.7
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 2.0

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