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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:3544.0 nTPM
HPA Brain:5506.9 nTPM
GTEx:3544.0 nTPM
FANTOM5:2819.0 Scaled Tags Per Million
Pig:974.0 nTPM
Mouse:432.8 nTPM
Allen mouse:10.3 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000572Antibody CAB016253Antibody CAB080180
Purkinje cells Not detectedNot detectedHigh
Cells in granular layer Not detectedLowNot detected
Cells in molecular layer LowLowHigh







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5506.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 3497.3
1768 Female, age 72, unknown 4886.5
2101 Male, age 74, right hemisphere 4535.7
2003 Female, age 85, right hemisphere 4143.9
1769 Male, age 76, right hemisphere 3383.4
2055 Female, age 91, right hemisphere 3238.5
2006 Male, age 61, right hemisphere 2767.4
1774 Male, age 80, left hemisphere 2757.2
1788 Male, age 55, unknown 2265.7
Cerebellar nuclei
nTPM: 5506.9
2783 Female, age 72, unknown 8482.2
2175 Male, age 61, right hemisphere 6791.2
1966 Female, age 91, left hemisphere 5738.9
1871 Male, age 74, unknown 5196.8
2882 Male, age 76, left hemisphere 4941.9
2177 Female, age 85, both hemispheres 4912.7
1879 Male, age 55, unknown 4888.5
2005 Male, age 80, left hemisphere 4585.4
2318 Male, age 74, left hemisphere 4024.8
Flocculonodular lobe
nTPM: 2760.5
1765 Male, age 55, unknown 3372.7
2004 Male, age 61, right hemisphere 3151.3
1767 Male, age 76, left hemisphere 3004.3
1792 Male, age 74, unknown 2818.5
2176 Female, age 91, right hemisphere 2661.2
1771 Male, age 80, left hemisphere 2432.5
1835 Female, age 85, right hemisphere 1882.6
Vermis
nTPM: 3197.9
1751 Male, age 74, right hemisphere 6135.9
1778 Female, age 91, left hemisphere 4104.0
1928 Female, age 72, unknown 3286.7
1766 Male, age 55, unknown 3141.9
1770 Male, age 76, left hemisphere 3080.1
2834 Male, age 80, left hemisphere 2951.1
1825 Male, age 74, unknown 2603.9
2460 Male, age 61, both hemispheres 1993.0
1988 Female, age 85, left hemisphere 1484.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3544.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 2893.0
Samples: 215

Max nTPM: 14010.2
Min nTPM: 1062.8
Std nTPM: 1385.2
Median nTPM: 2632.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 14010.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 7907.4
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 7722.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 7440.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 6930.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 6341.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 5973.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 5614.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 5354.9
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 5237.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 5230.7
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 5175.6
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 5119.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 4887.5
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 4802.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 4658.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 4647.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 4590.5
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 4549.6
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 4483.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 4428.6
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 4428.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 4379.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 4292.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 4272.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 4188.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 4050.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 3979.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 3949.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 3948.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 3931.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 3835.9
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 3822.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 3820.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 3805.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 3779.8
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 3732.7
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 3718.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 3711.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 3637.3
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 3555.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 3542.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 3525.1
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 3522.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 3504.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 3477.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 3435.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 3423.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 3400.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 3383.4
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 3376.8
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 3376.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 3359.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 3326.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 3321.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 3308.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 3289.5
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 3234.0
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 3232.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 3218.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 3198.8
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 3180.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 3156.9
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 3126.5
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 3126.0
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 3099.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 3096.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 3077.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 3056.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 3048.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 3029.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 3028.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 3024.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 3004.0
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 2980.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 2974.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 2969.9
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 2969.0
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 2967.9
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 2931.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 2928.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 2922.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 2920.7
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 2895.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 2844.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 2834.8
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 2833.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 2824.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 2800.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 2783.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 2757.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 2734.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 2725.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 2719.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 2716.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 2715.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 2710.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 2709.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 2709.0
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 2667.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 2665.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 2663.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 2648.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 2636.7
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 2633.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 2633.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 2632.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 2632.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 2604.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 2591.9
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 2570.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 2552.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 2524.8
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 2513.4
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 2508.6
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 2485.4
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 2465.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 2457.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 2454.4
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 2446.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 2428.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 2428.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 2420.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 2417.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 2413.6
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 2392.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 2388.1
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 2347.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 2326.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 2323.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 2316.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 2305.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 2305.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 2303.9
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 2284.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 2252.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 2238.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 2227.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 2211.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 2186.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 2168.6
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 2161.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 2156.8
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 2132.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 2125.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 2120.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 2118.1
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 2098.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 2084.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 2081.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 2078.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 2077.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 2075.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 2075.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 2071.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 2068.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 2063.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 2061.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 2056.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 2051.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 2042.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 2023.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 2019.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 2013.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 2008.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 2004.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 2004.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 2003.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 1996.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 1996.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 1991.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 1985.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 1985.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 1985.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 1981.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 1974.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1974.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 1973.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 1915.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 1908.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 1887.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 1882.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 1876.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 1875.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 1869.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 1858.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 1848.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 1848.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 1816.4
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 1802.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 1793.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 1778.7
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 1766.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 1755.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 1739.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1735.5
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1716.5
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 1704.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 1665.7
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 1652.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 1645.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 1608.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 1600.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 1560.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 1533.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 1507.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 1477.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 1448.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 1446.9
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 1398.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 1396.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 1375.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 1361.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 1132.5
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 1062.8
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Brain - Cerebellum
Average nTPM: 3544.0
Samples: 241

Max nTPM: 12368.3
Min nTPM: 1401.4
Std nTPM: 1644.0
Median nTPM: 3142.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 12368.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 11944.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 11297.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 9856.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 8501.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 7997.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 7431.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 6922.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 6576.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 6458.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 6414.0
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 6339.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 6090.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 6027.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 6000.6
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 5962.0
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 5935.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 5895.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 5795.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 5741.5
GTEX-11ONC-3026-SM-5985W 60-69 years, male 5669.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 5640.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 5615.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 5577.3
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 5523.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 5520.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 5431.0
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 5422.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 5371.0
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 5330.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 5325.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 5206.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 5136.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 5135.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 5088.7
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 5027.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 4913.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 4869.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 4864.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 4855.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 4808.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 4750.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 4723.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 4667.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 4659.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 4655.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 4652.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 4580.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 4570.3
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 4567.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 4473.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 4471.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 4361.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 4328.6
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 4304.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 4284.4
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 4277.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 4241.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 4204.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 4186.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 4185.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 4173.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 4130.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 4046.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 4016.5
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 3957.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 3897.2
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 3892.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 3843.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 3835.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 3806.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 3750.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 3749.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 3707.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 3699.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 3696.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 3683.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 3662.5
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 3655.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 3641.1
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 3631.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 3599.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 3588.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 3586.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 3580.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 3578.1
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 3576.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 3504.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 3492.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 3486.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 3483.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 3473.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 3452.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 3437.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 3429.2
GTEX-144GL-2926-SM-5O99F 50-59 years, male 3424.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 3421.8
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 3420.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 3414.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 3395.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 3392.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 3386.3
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 3371.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 3364.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 3360.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 3358.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 3354.3
GTEX-11EI6-2926-SM-5985U 60-69 years, male 3336.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 3320.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 3320.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 3304.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 3280.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 3262.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 3238.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 3234.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 3222.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 3179.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 3176.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 3157.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 3153.8
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 3142.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 3122.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 3119.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 3117.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 3093.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 3079.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 3069.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 3064.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 3063.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 3059.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 3047.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 3034.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 3031.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 3002.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 2997.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 2992.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 2975.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 2966.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 2960.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 2958.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 2951.6
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 2936.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 2913.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 2909.5
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 2908.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 2906.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 2847.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 2831.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 2831.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 2825.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 2823.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 2814.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 2811.5
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 2805.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 2799.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 2791.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 2787.0
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 2756.4
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 2743.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 2736.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 2723.2
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 2714.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 2704.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 2684.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 2669.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 2659.2
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 2658.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 2650.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 2646.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 2631.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 2629.5
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 2623.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 2618.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 2606.0
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 2563.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 2510.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 2509.9
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 2501.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 2496.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 2483.2
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 2461.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 2458.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 2453.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 2445.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 2445.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 2421.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 2400.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 2360.6
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 2346.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 2345.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 2331.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 2330.3
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 2327.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 2322.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 2296.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 2261.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 2252.3
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 2237.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 2229.8
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 2228.7
GTEX-18465-2926-SM-7KFSE 50-59 years, male 2201.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 2201.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 2193.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 2188.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 2187.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 2168.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 2163.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 2155.4
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 2140.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 2140.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 2113.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 2112.9
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 2109.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 2092.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 2065.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 2065.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 2064.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 2030.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 2017.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 1997.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 1993.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 1971.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 1969.1
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 1939.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 1920.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 1915.1
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 1902.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 1901.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 1896.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 1889.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 1811.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 1755.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 1733.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 1732.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 1673.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 1641.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 1557.9
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 1533.7
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 1533.1
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1523.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 1401.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2819.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 2819.0
FF:10166-103B4 76 years, female 3105.3
FF:10083-102B2 22-68 years, mixed 2532.7

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

974.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 974.0
Samples: 4

Max nTPM: 1703.6
Min nTPM: 591.3
Sample A Female 1703.6
Sample B Female 844.9
Sample C Male 591.3
Sample D Male 756.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

432.8
Mouse sample Sample description nTPM
Cerebellum
nTPM: 432.8
Samples: 4

Max nTPM: 439.4
Min nTPM: 424.6
Sample A Male 424.6
Sample B Male 436.7
Sample C Female 439.4
Sample D Female 430.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 10.3
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 14.8
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 13.0
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 5.9
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 3.5

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