PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:12486.1 nTPM
FANTOM5:7212.5 Scaled Tags Per Million
Pig:3204.2 nTPM
Mouse:763.8 nTPM
Allen mouse:13.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 12486.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 3355.4
1984 Male, age 76, both hemispheres 4388.5
2090 Male, age 80, both hemispheres 3508.8
2301 Female, age 85, both hemispheres 3104.5
2188 Female, age 91, both hemispheres 2419.8
Area postrema
nTPM: 12486.1
2799 Male, age 61, both hemispheres 22074.4
2306 Male, age 80, both hemispheres 8193.1
2054 Male, age 76, both hemispheres 7190.9
Dorsal cochlear nucleus
nTPM: 3629.0
2058 Male, age 76, both hemispheres 4475.6
2370 Male, age 61, both hemispheres 4459.0
2187 Female, age 91, both hemispheres 3313.7
2802 Male, age 74, right hemisphere 3118.1
2378 Male, age 80, both hemispheres 2778.7
Dorsal medullary reticular nucleus
nTPM: 3772.3
2040 Female, age 85, both hemispheres 4002.3
2088 Male, age 76, both hemispheres 3928.2
2373 Male, age 61, both hemispheres 3386.5
Dorsal motor vagal complex
nTPM: 6376.1
2797 Male, age 61, both hemispheres 9722.5
2185 Male, age 76, both hemispheres 7388.2
2813 Female, age 72, unknown 7164.5
2000 Male, age 74, unknown 6762.9
2643 Male, age 74, both hemispheres 5928.8
2844 Male, age 55, unknown 5175.9
2133 Female, age 91, both hemispheres 4984.0
2807 Female, age 85, both hemispheres 3882.0
Dorsal tegmental nucleus
nTPM: 5049.8
2358 Male, age 61, both hemispheres 6757.1
1936 Male, age 76, left hemisphere 4962.1
2083 Male, age 80, both hemispheres 4400.0
2326 Male, age 74, both hemispheres 4079.9
Dorsolateral tegmental area
nTPM: 4984.3
2360 Male, age 74, both hemispheres 8052.4
2337 Male, age 61, both hemispheres 4797.6
2141 Male, age 76, both hemispheres 4533.4
2654 Male, age 80, both hemispheres 4047.0
2751 Female, age 85, both hemispheres 3491.0
Gigantocellular reticular nuclei, medullary
nTPM: 3578.1
2462 Male, age 74, both hemispheres 5626.3
2314 Male, age 61, both hemispheres 4482.2
1876 Female, age 85, both hemispheres 4021.0
2022 Male, age 76, right hemisphere 2979.2
2387 Female, age 91, both hemispheres 2307.8
2310 Male, age 80, both hemispheres 2052.1
Gigantocellular reticular nuclei, pars
nTPM: 3327.3
2084 Female, age 85, both hemispheres 4241.5
2336 Male, age 61, both hemispheres 3811.9
2168 Male, age 76, both hemispheres 2900.8
2330 Male, age 80, both hemispheres 2885.0
2706 Male, age 80, both hemispheres 2797.4
Inferior olive
nTPM: 5528.3
2085 Female, age 85, both hemispheres 6393.2
2563 Male, age 74, both hemispheres 5929.6
2628 Female, age 91, both hemispheres 5466.4
2178 Male, age 61, both hemispheres 5205.6
2379 Male, age 80, both hemispheres 4646.9
Kolliker-Fuse nucleus
nTPM: 6263.9
2315 Male, age 76, right hemisphere 12758.9
2163 Male, age 80, both hemispheres 4073.2
2793 Female, age 91, left hemisphere 1959.6
Lateral lemniscal nuclei
nTPM: 2233.5
2746 Female, age 85, left hemisphere 3431.3
2169 Male, age 76, both hemispheres 2896.6
2036 Male, age 80, both hemispheres 1861.1
2453 Male, age 74, right hemisphere 1519.0
2320 Female, age 91, left hemisphere 1459.7
Lateral medullary reticular nucleus
nTPM: 6326.8
2305 Male, age 74, both hemispheres 10096.9
2852 Male, age 80, both hemispheres 6373.2
2374 Male, age 61, both hemispheres 5838.6
2190 Female, age 85, both hemispheres 5642.7
2804 Female, age 91, both hemispheres 5045.1
2044 Male, age 76, both hemispheres 4964.2
Lateral parabrachial nucleus
nTPM: 4767.2
2792 Male, age 76, both hemispheres 6079.1
2139 Female, age 85, right hemisphere 5296.0
2790 Male, age 61, both hemispheres 3871.1
2013 Male, age 80, both hemispheres 3822.5
Lateral vestibular nucleus
nTPM: 4261.4
2311 Male, age 80, both hemispheres 4496.5
2184 Male, age 76, both hemispheres 4026.3
Locus coeruleus
nTPM: 4203.7
2123 Female, age 91, both hemispheres 5232.5
2788 Male, age 74, unknown 4953.2
2014 Male, age 55, unknown 4529.7
1980 Male, age 76, both hemispheres 4392.6
2317 Female, age 72, unknown 4176.3
2162 Male, age 80, both hemispheres 3386.0
2720 Male, age 74, both hemispheres 2755.3
Medial olivary nucleus
nTPM: 7272.4
1962 Male, age 76, both hemispheres 7926.0
1943 Male, age 61, both hemispheres 7440.7
2138 Female, age 91, both hemispheres 7432.6
2851 Male, age 80, both hemispheres 6290.4
Medial parabrachial nucleus
nTPM: 3774.9
2156 Male, age 61, both hemispheres 4519.1
2854 Male, age 80, both hemispheres 3813.5
2786 Male, age 76, both hemispheres 3591.5
2170 Female, age 91, both hemispheres 3486.9
2463 Female, age 85, right hemisphere 3463.6
Medial periolivary nuclei
nTPM: 3692.7
2791 Male, age 74, right hemisphere 6545.8
2063 Male, age 76, both hemispheres 3655.7
2171 Female, age 85, both hemispheres 3310.3
2081 Male, age 80, both hemispheres 2718.3
2458 Female, age 91, both hemispheres 2233.6
Medial vestibular nucleus
nTPM: 4443.7
2134 Male, age 76, both hemispheres 5261.8
2743 Female, age 85, both hemispheres 5181.9
2801 Male, age 74, both hemispheres 4728.5
2624 Male, age 61, both hemispheres 4449.6
2093 Male, age 80, both hemispheres 3846.9
2803 Female, age 91, both hemispheres 3193.5
Motor facial nucleus
nTPM: 3204.6
2365 Male, age 74, right hemisphere 4803.2
2062 Male, age 76, both hemispheres 3773.3
2795 Female, age 91, both hemispheres 3239.8
2126 Male, age 61, both hemispheres 3132.6
2697 Female, age 85, both hemispheres 2618.6
2327 Male, age 80, both hemispheres 1660.3
Motor hypoglossal nucleus
nTPM: 4428.9
2277 Male, age 76, both hemispheres 6311.2
2461 Male, age 61, both hemispheres 6123.0
2125 Female, age 91, both hemispheres 3694.5
2182 Male, age 80, both hemispheres 3264.3
2132 Female, age 85, both hemispheres 2751.5
Motor trigeminal nucleus
nTPM: 2678.9
2335 Male, age 61, both hemispheres 3979.8
2309 Male, age 76, both hemispheres 3446.4
2079 Male, age 80, both hemispheres 2541.9
2321 Female, age 91, both hemispheres 2059.7
2560 Male, age 74, both hemispheres 1366.7
Nuclei of the trapezoid body
nTPM: 2908.9
1983 Male, age 76, both hemispheres 4152.5
2735 Female, age 85, both hemispheres 3045.0
2368 Female, age 91, both hemispheres 2616.2
2166 Male, age 80, both hemispheres 2426.1
2159 Male, age 61, both hemispheres 2304.7
Nucleus ambiguus
nTPM: 5875.9
2071 Male, age 76, both hemispheres 8637.6
2096 Female, age 85, both hemispheres 3114.2
Nucleus cuneatus
nTPM: 4595.8
2564 Male, age 74, both hemispheres 7106.7
2808 Female, age 85, both hemispheres 6081.9
2562 Male, age 61, both hemispheres 5642.8
2380 Male, age 80, both hemispheres 5244.4
2100 Male, age 76, both hemispheres 4380.4
2376 Male, age 61, both hemispheres 4003.4
2131 Male, age 76, both hemispheres 3698.2
2381 Male, age 80, both hemispheres 3130.3
2805 Female, age 91, both hemispheres 2074.5
Nucleus gracilis
nTPM: 6861.6
2627 Male, age 74, both hemispheres 12905.1
2299 Female, age 85, both hemispheres 4185.0
2382 Male, age 80, both hemispheres 3494.6
Nucleus raphe magnus
nTPM: 3189.4
2051 Male, age 76, both hemispheres 4903.0
2455 Male, age 74, both hemispheres 4716.2
2172 Female, age 85, both hemispheres 2600.8
2328 Male, age 80, both hemispheres 2437.2
2160 Male, age 61, both hemispheres 2409.1
2459 Female, age 91, both hemispheres 2070.3
Nucleus raphe obscurus
nTPM: 6048.0
2142 Male, age 76, midline 10144.9
2800 Male, age 61, midline 4103.3
2845 Female, age 85, midline 3895.9
Nucleus raphe pallidus
nTPM: 8812.7
1924 Male, age 61, midline 14521.8
2145 Male, age 76, midline 7364.8
2183 Male, age 80, midline 4551.5
Nucleus tractus solitarii
nTPM: 5356.9
2144 Female, age 91, right hemisphere 6651.2
2191 Female, age 85, both hemispheres 6243.3
2307 Male, age 80, both hemispheres 4524.7
2656 Male, age 76, both hemispheres 4008.6
Paramedian reticular nucleus
nTPM: 3946.4
2052 Male, age 76, both hemispheres 4935.7
2057 Male, age 80, both hemispheres 4449.2
2050 Female, age 85, both hemispheres 3283.8
2313 Male, age 61, both hemispheres 3116.7
Parvicellular reticular nuclei
nTPM: 3567.9
2119 Male, age 80, both hemispheres 5276.3
2095 Male, age 76, both hemispheres 4135.6
2558 Male, age 74, both hemispheres 1291.9
Parvicellular reticular nuclei, medullary
nTPM: 3610.0
2091 Female, age 85, both hemispheres 3932.7
2189 Female, age 91, both hemispheres 3640.4
2181 Male, age 80, left hemisphere 3256.7
Pedunculopontine tegmental nucleus
nTPM: 4529.4
2338 Male, age 61, both hemispheres 5146.2
1921 Female, age 85, both hemispheres 4364.7
2334 Male, age 80, both hemispheres 4077.3
Peritrigeminal nucleus
nTPM: 6375.0
2067 Female, age 85, both hemispheres 7459.5
2136 Male, age 76, both hemispheres 6526.5
2179 Male, age 61, both hemispheres 5138.8
Pontine nuclei
nTPM: 2534.5
1863 Male, age 55, unknown 3783.2
1968 Male, age 76, left hemisphere 3292.1
2787 Female, age 85, both hemispheres 3089.7
2115 Male, age 80, left hemisphere 2940.3
2109 Female, age 72, unknown 2316.9
2727 Male, age 61, right hemisphere 2024.1
2319 Female, age 91, both hemispheres 1793.5
2454 Male, age 74, left hemisphere 1035.7
Pontine raphe nucleus
nTPM: 3480.9
2853 Male, age 76, midline 4086.5
2122 Female, age 85, midline 2875.4
Posteroventral cochlear nucleus
nTPM: 3574.0
2371 Male, age 61, both hemispheres 4494.6
2070 Male, age 76, both hemispheres 4375.7
2752 Female, age 85, both hemispheres 3668.2
2341 Male, age 80, both hemispheres 3090.1
2135 Female, age 91, both hemispheres 2241.2
Prepositus hypoglossal nucleus
nTPM: 4611.6
2086 Male, age 80, both hemispheres 5280.1
2855 Female, age 85, right hemisphere 3943.1
Principal sensory trigeminal nucleus
nTPM: 2745.8
2324 Male, age 76, both hemispheres 4605.5
2008 Male, age 80, left hemisphere 2452.6
2158 Male, age 61, both hemispheres 2327.5
2367 Female, age 91, left hemisphere 1597.7
Reticular pontine nucleus, caudal
nTPM: 2480.8
2092 Male, age 76, both hemispheres 4559.9
2457 Female, age 91, both hemispheres 2083.1
2332 Male, age 80, right hemisphere 2039.0
2559 Male, age 74, both hemispheres 1241.3
Reticular pontine nucleus, oral
nTPM: 2929.5
1939 Male, age 80, both hemispheres 4785.8
2167 Male, age 76, both hemispheres 3656.0
2012 Female, age 85, both hemispheres 3314.7
2366 Female, age 91, both hemispheres 1732.9
2361 Male, age 74, both hemispheres 1158.3
Reticulotegmental nucleus
nTPM: 2897.2
2333 Male, age 80, both hemispheres 3560.1
2322 Female, age 91, both hemispheres 3225.7
2325 Male, age 76, both hemispheres 3167.3
2452 Male, age 74, both hemispheres 1635.6
Spinal trigeminal nucleus, caudal
nTPM: 4144.6
2308 Male, age 80, both hemispheres 4818.1
2642 Male, age 74, both hemispheres 4461.2
2312 Male, age 61, both hemispheres 4356.7
2447 Male, age 76, both hemispheres 3794.5
2390 Female, age 91, both hemispheres 3292.3
Spinal trigeminal nucleus, interpolar
nTPM: 3999.8
2625 Male, age 61, both hemispheres 5472.3
2066 Male, age 76, right hemisphere 4730.5
2033 Male, age 80, both hemispheres 3802.4
2386 Female, age 85, both hemispheres 3409.5
2389 Female, age 91, both hemispheres 2584.4
Spinal trigeminal nucleus, oral
nTPM: 3525.4
2737 Female, age 85, both hemispheres 3785.2
1978 Male, age 76, both hemispheres 3739.3
2164 Male, age 80, both hemispheres 3051.7
Spinal vestibular nucleus
nTPM: 3480.1
2748 Male, age 76, both hemispheres 4162.9
2780 Male, age 80, both hemispheres 3975.7
2796 Male, age 61, both hemispheres 3922.9
2806 Female, age 85, both hemispheres 3715.8
2186 Female, age 91, both hemispheres 3256.8
2384 Male, age 74, both hemispheres 1846.2
Subcoeruleus area
nTPM: 3132.3
1958 Male, age 80, both hemispheres 3850.5
2369 Female, age 85, left hemisphere 3559.5
2323 Female, age 91, left hemisphere 3456.7
2089 Male, age 76, left hemisphere 2633.8
2451 Male, age 74, both hemispheres 2160.8
Superior olive
nTPM: 3317.5
2364 Male, age 74, right hemisphere 6544.2
2020 Male, age 76, both hemispheres 3215.5
1875 Female, age 85, both hemispheres 2712.4
2329 Male, age 80, right hemisphere 2081.1
2561 Female, age 91, both hemispheres 2034.0
Superior vestibular nucleus
nTPM: 7755.8
2383 Male, age 74, both hemispheres 11505.1
2061 Male, age 76, both hemispheres 6893.1
2015 Male, age 80, both hemispheres 4869.1
Ventral medullary reticular nucleus
nTPM: 3934.8
2060 Male, age 76, both hemispheres 4258.1
2372 Male, age 61, both hemispheres 3611.5
Ventral periolivary nuclei
nTPM: 3025.5
2130 Female, age 85, both hemispheres 3665.0
2023 Male, age 76, both hemispheres 3407.3
2165 Male, age 80, both hemispheres 3301.3
2794 Female, age 91, left hemisphere 1728.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 4895.4
1986 Male, age 76, both hemispheres 6739.2
2741 Female, age 85, both hemispheres 4711.4
2302 Female, age 91, both hemispheres 4663.2
2180 Male, age 61, both hemispheres 4589.6
2118 Male, age 80, both hemispheres 3773.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 3334.4
2359 Male, age 61, both hemispheres 4676.2
2840 Female, age 85, both hemispheres 4172.1
1959 Male, age 76, both hemispheres 3921.1
2449 Male, age 74, both hemispheres 2656.4
2161 Male, age 80, both hemispheres 2556.3
2456 Female, age 91, both hemispheres 2024.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 7212.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 5674.0
FF:10182-103D2 60 years, female 6657.8
FF:10165-103B3 76 years, female 4690.2
Medulla oblongata
Scaled Tags Per Million: 7212.5
FF:10174-103C3 60 years, female 8037.3
FF:10038-101F2 18-64 years, mixed 7106.8
FF:10155-103A2 76 years, female 6493.4
Pons
Scaled Tags Per Million: 2734.1
FF:10033-101E6 18-54 years, mixed 2734.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3204.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 3204.3
Samples: 4

Max nTPM: 3501.9
Min nTPM: 2747.2
Sample A Female 2747.2
Sample B Female 3167.5
Sample C Male 3501.9
Sample D Male 3400.4
Pons
nTPM: 3038.1
Samples: 4

Max nTPM: 3686.7
Min nTPM: 2422.9
Sample A Female 3686.7
Sample B Female 2422.9
Sample C Male 2975.2
Sample D Male 3067.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 763.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 763.8
Samples: 4

Max nTPM: 813.4
Min nTPM: 741.3
Sample A Male 750.5
Sample B Male 741.3
Sample C Female 813.4
Sample D Female 749.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.0
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 19.4
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 15.8
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 6.7
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 3.3
Pons
Expression energy: 11.1
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 16.8
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 14.5
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 5.4
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 2.6

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