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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1307.5
nTPM
FANTOM5:
5776.1
Scaled Tags Per Million
Pig:
853.0
nTPM
Allen mouse:
20.4
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1307.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 915.7
2188
Female, age 91, both hemispheres
1130.5
2301
Female, age 85, both hemispheres
930.4
2090
Male, age 80, both hemispheres
898.9
1984
Male, age 76, both hemispheres
703.0
Dorsal cochlear nucleus nTPM: 875.2
2187
Female, age 91, both hemispheres
1236.9
2370
Male, age 61, both hemispheres
827.0
2802
Male, age 74, right hemisphere
814.3
2058
Male, age 76, both hemispheres
778.8
2378
Male, age 80, both hemispheres
719.2
Dorsal tegmental nucleus nTPM: 967.9
2358
Male, age 61, both hemispheres
1205.0
2083
Male, age 80, both hemispheres
1071.0
2326
Male, age 74, both hemispheres
859.1
1936
Male, age 76, left hemisphere
736.5
Dorsolateral tegmental area nTPM: 863.3
2751
Female, age 85, both hemispheres
1070.7
2654
Male, age 80, both hemispheres
959.8
2337
Male, age 61, both hemispheres
862.1
2141
Male, age 76, both hemispheres
796.4
2360
Male, age 74, both hemispheres
627.6
Kolliker-Fuse nucleus nTPM: 1113.0
2163
Male, age 80, both hemispheres
1291.2
2793
Female, age 91, left hemisphere
1179.9
2315
Male, age 76, right hemisphere
868.0
Lateral lemniscal nuclei nTPM: 1188.0
2169
Male, age 76, both hemispheres
1579.5
2036
Male, age 80, both hemispheres
1308.1
2453
Male, age 74, right hemisphere
1064.7
2746
Female, age 85, left hemisphere
1021.3
2320
Female, age 91, left hemisphere
966.3
Lateral parabrachial nucleus nTPM: 963.8
2139
Female, age 85, right hemisphere
1262.7
2013
Male, age 80, both hemispheres
982.1
2790
Male, age 61, both hemispheres
883.7
2792
Male, age 76, both hemispheres
726.8
Lateral vestibular nucleus nTPM: 1164.4
2184
Male, age 76, both hemispheres
1293.9
2311
Male, age 80, both hemispheres
1035.0
Locus coeruleus nTPM: 1209.0
2123
Female, age 91, both hemispheres
1520.4
2014
Male, age 55, unknown
1499.4
2720
Male, age 74, both hemispheres
1211.3
2317
Female, age 72, unknown
1101.1
2788
Male, age 74, unknown
1099.2
1980
Male, age 76, both hemispheres
1060.3
2162
Male, age 80, both hemispheres
971.5
Medial parabrachial nucleus nTPM: 1071.9
2170
Female, age 91, both hemispheres
1476.5
2854
Male, age 80, both hemispheres
1134.1
2156
Male, age 61, both hemispheres
1066.8
2786
Male, age 76, both hemispheres
848.5
2463
Female, age 85, right hemisphere
833.6
Medial periolivary nuclei nTPM: 1100.6
2063
Male, age 76, both hemispheres
1562.3
2171
Female, age 85, both hemispheres
1244.4
2458
Female, age 91, both hemispheres
956.4
2081
Male, age 80, both hemispheres
879.8
2791
Male, age 74, right hemisphere
859.9
Motor facial nucleus nTPM: 1078.8
2062
Male, age 76, both hemispheres
1634.1
2365
Male, age 74, right hemisphere
1077.0
2795
Female, age 91, both hemispheres
983.5
2327
Male, age 80, both hemispheres
972.7
2697
Female, age 85, both hemispheres
972.5
2126
Male, age 61, both hemispheres
833.1
Motor trigeminal nucleus nTPM: 1048.3
2560
Male, age 74, both hemispheres
1175.5
2321
Female, age 91, both hemispheres
1108.4
2079
Male, age 80, both hemispheres
1066.9
2335
Male, age 61, both hemispheres
1005.0
2309
Male, age 76, both hemispheres
885.5
Nuclei of the trapezoid body nTPM: 1297.5
2159
Male, age 61, both hemispheres
1737.6
1983
Male, age 76, both hemispheres
1504.8
2735
Female, age 85, both hemispheres
1296.0
2166
Male, age 80, both hemispheres
1025.8
2368
Female, age 91, both hemispheres
923.3
Nucleus raphe magnus nTPM: 1275.1
2160
Male, age 61, both hemispheres
1909.9
2172
Female, age 85, both hemispheres
1402.4
2455
Male, age 74, both hemispheres
1216.2
2051
Male, age 76, both hemispheres
1106.9
2328
Male, age 80, both hemispheres
1024.3
2459
Female, age 91, both hemispheres
990.7
Paramedian reticular nucleus nTPM: 1152.5
2050
Female, age 85, both hemispheres
1370.5
2057
Male, age 80, both hemispheres
1198.2
2313
Male, age 61, both hemispheres
1180.5
2052
Male, age 76, both hemispheres
860.6
Pedunculopontine tegmental nucleus nTPM: 1041.9
2338
Male, age 61, both hemispheres
1225.5
2334
Male, age 80, both hemispheres
1010.1
1921
Female, age 85, both hemispheres
890.2
Pontine nuclei nTPM: 1307.5
1863
Male, age 55, unknown
1692.2
2787
Female, age 85, both hemispheres
1640.2
2727
Male, age 61, right hemisphere
1487.9
1968
Male, age 76, left hemisphere
1350.6
2109
Female, age 72, unknown
1250.9
2454
Male, age 74, left hemisphere
1108.5
2319
Female, age 91, both hemispheres
1052.6
2115
Male, age 80, left hemisphere
877.0
Pontine raphe nucleus nTPM: 1184.4
2122
Female, age 85, midline
1351.1
2853
Male, age 76, midline
1017.6
Posteroventral cochlear nucleus nTPM: 946.3
2752
Female, age 85, both hemispheres
1064.5
2341
Male, age 80, both hemispheres
1030.1
2135
Female, age 91, both hemispheres
911.4
2070
Male, age 76, both hemispheres
903.8
2371
Male, age 61, both hemispheres
821.7
Principal sensory trigeminal nucleus nTPM: 1248.1
2158
Male, age 61, both hemispheres
1670.6
2008
Male, age 80, left hemisphere
1135.3
2324
Male, age 76, both hemispheres
1135.0
2367
Female, age 91, left hemisphere
1051.5
Reticular pontine nucleus, caudal nTPM: 1085.4
2092
Male, age 76, both hemispheres
1360.8
2332
Male, age 80, right hemisphere
1032.1
2457
Female, age 91, both hemispheres
1016.3
2559
Male, age 74, both hemispheres
932.3
Reticular pontine nucleus, oral nTPM: 1072.8
2361
Male, age 74, both hemispheres
1338.7
2012
Female, age 85, both hemispheres
1202.2
1939
Male, age 80, both hemispheres
1017.8
2366
Female, age 91, both hemispheres
912.8
2167
Male, age 76, both hemispheres
892.6
Reticulotegmental nucleus nTPM: 1054.5
2325
Male, age 76, both hemispheres
1280.6
2322
Female, age 91, both hemispheres
1052.0
2452
Male, age 74, both hemispheres
978.9
2333
Male, age 80, both hemispheres
906.3
Spinal trigeminal nucleus, oral nTPM: 1034.4
2164
Male, age 80, both hemispheres
1225.5
2737
Female, age 85, both hemispheres
1103.9
1978
Male, age 76, both hemispheres
773.8
Subcoeruleus area nTPM: 1050.7
2323
Female, age 91, left hemisphere
1191.9
2089
Male, age 76, left hemisphere
1152.1
1958
Male, age 80, both hemispheres
1125.6
2369
Female, age 85, left hemisphere
896.0
2451
Male, age 74, both hemispheres
887.7
Superior olive nTPM: 1073.9
1875
Female, age 85, both hemispheres
1282.3
2020
Male, age 76, both hemispheres
1233.4
2329
Male, age 80, right hemisphere
974.8
2561
Female, age 91, both hemispheres
941.4
2364
Male, age 74, right hemisphere
937.6
Ventral periolivary nuclei nTPM: 1134.6
2130
Female, age 85, both hemispheres
1195.9
2023
Male, age 76, both hemispheres
1187.8
2165
Male, age 80, both hemispheres
1176.4
2794
Female, age 91, left hemisphere
978.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 1050.9
1959
Male, age 76, both hemispheres
1222.7
2840
Female, age 85, both hemispheres
1129.3
2449
Male, age 74, both hemispheres
1100.2
2161
Male, age 80, both hemispheres
1024.7
2359
Male, age 61, both hemispheres
920.9
2456
Female, age 91, both hemispheres
907.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
853.0
Pig sample
Sample description
nTPM
Pons nTPM: 853.1
Samples: 4
Max nTPM: 1011.6
Min nTPM: 727.6
Sample A
Female
727.6
Sample B
Female
834.6
Sample C
Male
1011.6
Sample D
Male
838.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
