PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1353.8 nTPM
FANTOM5:5776.1 Scaled Tags Per Million
Pig:853.0 nTPM
Mouse:1358.2 nTPM
Allen mouse:21.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1353.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 915.7
2188 Female, age 91, both hemispheres 1130.5
2301 Female, age 85, both hemispheres 930.4
2090 Male, age 80, both hemispheres 898.9
1984 Male, age 76, both hemispheres 703.0
Area postrema
nTPM: 666.8
2054 Male, age 76, both hemispheres 692.2
2306 Male, age 80, both hemispheres 668.3
2799 Male, age 61, both hemispheres 640.0
Dorsal cochlear nucleus
nTPM: 875.2
2187 Female, age 91, both hemispheres 1236.9
2370 Male, age 61, both hemispheres 827.0
2802 Male, age 74, right hemisphere 814.3
2058 Male, age 76, both hemispheres 778.8
2378 Male, age 80, both hemispheres 719.2
Dorsal medullary reticular nucleus
nTPM: 954.4
2040 Female, age 85, both hemispheres 1417.0
2373 Male, age 61, both hemispheres 747.1
2088 Male, age 76, both hemispheres 699.0
Dorsal motor vagal complex
nTPM: 864.2
2133 Female, age 91, both hemispheres 1345.9
2000 Male, age 74, unknown 1016.0
2844 Male, age 55, unknown 1012.5
2643 Male, age 74, both hemispheres 893.8
2813 Female, age 72, unknown 844.1
2807 Female, age 85, both hemispheres 705.9
2185 Male, age 76, both hemispheres 585.1
2797 Male, age 61, both hemispheres 510.2
Dorsal tegmental nucleus
nTPM: 967.9
2358 Male, age 61, both hemispheres 1205.0
2083 Male, age 80, both hemispheres 1071.0
2326 Male, age 74, both hemispheres 859.1
1936 Male, age 76, left hemisphere 736.5
Dorsolateral tegmental area
nTPM: 863.3
2751 Female, age 85, both hemispheres 1070.7
2654 Male, age 80, both hemispheres 959.8
2337 Male, age 61, both hemispheres 862.1
2141 Male, age 76, both hemispheres 796.4
2360 Male, age 74, both hemispheres 627.6
Gigantocellular reticular nuclei, medullary
nTPM: 939.2
2462 Male, age 74, both hemispheres 1089.3
2387 Female, age 91, both hemispheres 1009.1
2310 Male, age 80, both hemispheres 1003.4
1876 Female, age 85, both hemispheres 938.0
2314 Male, age 61, both hemispheres 814.4
2022 Male, age 76, right hemisphere 780.8
Gigantocellular reticular nuclei, pars
nTPM: 1122.0
2168 Male, age 76, both hemispheres 1509.0
2084 Female, age 85, both hemispheres 1201.3
2336 Male, age 61, both hemispheres 1079.5
2706 Male, age 80, both hemispheres 910.4
2330 Male, age 80, both hemispheres 909.9
Inferior olive
nTPM: 878.5
2628 Female, age 91, both hemispheres 1140.1
2085 Female, age 85, both hemispheres 914.1
2563 Male, age 74, both hemispheres 893.5
2379 Male, age 80, both hemispheres 815.7
2178 Male, age 61, both hemispheres 629.4
Kolliker-Fuse nucleus
nTPM: 1113.0
2163 Male, age 80, both hemispheres 1291.2
2793 Female, age 91, left hemisphere 1179.9
2315 Male, age 76, right hemisphere 868.0
Lateral lemniscal nuclei
nTPM: 1188.0
2169 Male, age 76, both hemispheres 1579.5
2036 Male, age 80, both hemispheres 1308.1
2453 Male, age 74, right hemisphere 1064.7
2746 Female, age 85, left hemisphere 1021.3
2320 Female, age 91, left hemisphere 966.3
Lateral medullary reticular nucleus
nTPM: 1009.6
2804 Female, age 91, both hemispheres 1267.3
2044 Male, age 76, both hemispheres 1143.3
2305 Male, age 74, both hemispheres 1072.0
2852 Male, age 80, both hemispheres 914.5
2190 Female, age 85, both hemispheres 885.0
2374 Male, age 61, both hemispheres 775.8
Lateral parabrachial nucleus
nTPM: 963.8
2139 Female, age 85, right hemisphere 1262.7
2013 Male, age 80, both hemispheres 982.1
2790 Male, age 61, both hemispheres 883.7
2792 Male, age 76, both hemispheres 726.8
Lateral vestibular nucleus
nTPM: 1164.4
2184 Male, age 76, both hemispheres 1293.9
2311 Male, age 80, both hemispheres 1035.0
Locus coeruleus
nTPM: 1209.0
2123 Female, age 91, both hemispheres 1520.4
2014 Male, age 55, unknown 1499.4
2720 Male, age 74, both hemispheres 1211.3
2317 Female, age 72, unknown 1101.1
2788 Male, age 74, unknown 1099.2
1980 Male, age 76, both hemispheres 1060.3
2162 Male, age 80, both hemispheres 971.5
Medial olivary nucleus
nTPM: 873.0
2138 Female, age 91, both hemispheres 988.9
2851 Male, age 80, both hemispheres 931.7
1962 Male, age 76, both hemispheres 831.2
1943 Male, age 61, both hemispheres 740.2
Medial parabrachial nucleus
nTPM: 1071.9
2170 Female, age 91, both hemispheres 1476.5
2854 Male, age 80, both hemispheres 1134.1
2156 Male, age 61, both hemispheres 1066.8
2786 Male, age 76, both hemispheres 848.5
2463 Female, age 85, right hemisphere 833.6
Medial periolivary nuclei
nTPM: 1100.6
2063 Male, age 76, both hemispheres 1562.3
2171 Female, age 85, both hemispheres 1244.4
2458 Female, age 91, both hemispheres 956.4
2081 Male, age 80, both hemispheres 879.8
2791 Male, age 74, right hemisphere 859.9
Medial vestibular nucleus
nTPM: 1162.9
2801 Male, age 74, both hemispheres 1429.6
2134 Male, age 76, both hemispheres 1299.9
2624 Male, age 61, both hemispheres 1197.9
2803 Female, age 91, both hemispheres 1108.1
2743 Female, age 85, both hemispheres 1006.9
2093 Male, age 80, both hemispheres 935.1
Motor facial nucleus
nTPM: 1078.8
2062 Male, age 76, both hemispheres 1634.1
2365 Male, age 74, right hemisphere 1077.0
2795 Female, age 91, both hemispheres 983.5
2327 Male, age 80, both hemispheres 972.7
2697 Female, age 85, both hemispheres 972.5
2126 Male, age 61, both hemispheres 833.1
Motor hypoglossal nucleus
nTPM: 1151.4
2461 Male, age 61, both hemispheres 1522.8
2125 Female, age 91, both hemispheres 1272.4
2132 Female, age 85, both hemispheres 1210.0
2182 Male, age 80, both hemispheres 1054.8
2277 Male, age 76, both hemispheres 697.3
Motor trigeminal nucleus
nTPM: 1048.3
2560 Male, age 74, both hemispheres 1175.5
2321 Female, age 91, both hemispheres 1108.4
2079 Male, age 80, both hemispheres 1066.9
2335 Male, age 61, both hemispheres 1005.0
2309 Male, age 76, both hemispheres 885.5
Nuclei of the trapezoid body
nTPM: 1297.5
2159 Male, age 61, both hemispheres 1737.6
1983 Male, age 76, both hemispheres 1504.8
2735 Female, age 85, both hemispheres 1296.0
2166 Male, age 80, both hemispheres 1025.8
2368 Female, age 91, both hemispheres 923.3
Nucleus ambiguus
nTPM: 918.5
2096 Female, age 85, both hemispheres 1050.1
2071 Male, age 76, both hemispheres 787.0
Nucleus cuneatus
nTPM: 801.2
2564 Male, age 74, both hemispheres 966.2
2131 Male, age 76, both hemispheres 853.6
2380 Male, age 80, both hemispheres 806.4
2805 Female, age 91, both hemispheres 790.7
2376 Male, age 61, both hemispheres 789.4
2381 Male, age 80, both hemispheres 775.6
2562 Male, age 61, both hemispheres 752.9
2808 Female, age 85, both hemispheres 741.1
2100 Male, age 76, both hemispheres 735.3
Nucleus gracilis
nTPM: 766.4
2627 Male, age 74, both hemispheres 938.0
2382 Male, age 80, both hemispheres 794.8
2299 Female, age 85, both hemispheres 566.3
Nucleus raphe magnus
nTPM: 1275.1
2160 Male, age 61, both hemispheres 1909.9
2172 Female, age 85, both hemispheres 1402.4
2455 Male, age 74, both hemispheres 1216.2
2051 Male, age 76, both hemispheres 1106.9
2328 Male, age 80, both hemispheres 1024.3
2459 Female, age 91, both hemispheres 990.7
Nucleus raphe obscurus
nTPM: 947.1
2845 Female, age 85, midline 1236.4
2800 Male, age 61, midline 957.9
2142 Male, age 76, midline 647.0
Nucleus raphe pallidus
nTPM: 1033.5
2183 Male, age 80, midline 1225.7
1924 Male, age 61, midline 1149.8
2145 Male, age 76, midline 724.9
Nucleus tractus solitarii
nTPM: 789.5
2191 Female, age 85, both hemispheres 859.0
2144 Female, age 91, right hemisphere 833.3
2656 Male, age 76, both hemispheres 789.1
2307 Male, age 80, both hemispheres 676.6
Paramedian reticular nucleus
nTPM: 1152.5
2050 Female, age 85, both hemispheres 1370.5
2057 Male, age 80, both hemispheres 1198.2
2313 Male, age 61, both hemispheres 1180.5
2052 Male, age 76, both hemispheres 860.6
Parvicellular reticular nuclei
nTPM: 1069.9
2119 Male, age 80, both hemispheres 1132.6
2558 Male, age 74, both hemispheres 1051.9
2095 Male, age 76, both hemispheres 1025.2
Parvicellular reticular nuclei, medullary
nTPM: 1189.6
2091 Female, age 85, both hemispheres 1375.9
2189 Female, age 91, both hemispheres 1267.6
2181 Male, age 80, left hemisphere 925.5
Pedunculopontine tegmental nucleus
nTPM: 1041.9
2338 Male, age 61, both hemispheres 1225.5
2334 Male, age 80, both hemispheres 1010.1
1921 Female, age 85, both hemispheres 890.2
Peritrigeminal nucleus
nTPM: 1104.2
2067 Female, age 85, both hemispheres 1130.7
2136 Male, age 76, both hemispheres 1095.7
2179 Male, age 61, both hemispheres 1086.2
Pontine nuclei
nTPM: 1307.5
1863 Male, age 55, unknown 1692.2
2787 Female, age 85, both hemispheres 1640.2
2727 Male, age 61, right hemisphere 1487.9
1968 Male, age 76, left hemisphere 1350.6
2109 Female, age 72, unknown 1250.9
2454 Male, age 74, left hemisphere 1108.5
2319 Female, age 91, both hemispheres 1052.6
2115 Male, age 80, left hemisphere 877.0
Pontine raphe nucleus
nTPM: 1184.4
2122 Female, age 85, midline 1351.1
2853 Male, age 76, midline 1017.6
Posteroventral cochlear nucleus
nTPM: 946.3
2752 Female, age 85, both hemispheres 1064.5
2341 Male, age 80, both hemispheres 1030.1
2135 Female, age 91, both hemispheres 911.4
2070 Male, age 76, both hemispheres 903.8
2371 Male, age 61, both hemispheres 821.7
Prepositus hypoglossal nucleus
nTPM: 983.5
2855 Female, age 85, right hemisphere 1203.8
2086 Male, age 80, both hemispheres 763.2
Principal sensory trigeminal nucleus
nTPM: 1248.1
2158 Male, age 61, both hemispheres 1670.6
2008 Male, age 80, left hemisphere 1135.3
2324 Male, age 76, both hemispheres 1135.0
2367 Female, age 91, left hemisphere 1051.5
Reticular pontine nucleus, caudal
nTPM: 1085.4
2092 Male, age 76, both hemispheres 1360.8
2332 Male, age 80, right hemisphere 1032.1
2457 Female, age 91, both hemispheres 1016.3
2559 Male, age 74, both hemispheres 932.3
Reticular pontine nucleus, oral
nTPM: 1072.8
2361 Male, age 74, both hemispheres 1338.7
2012 Female, age 85, both hemispheres 1202.2
1939 Male, age 80, both hemispheres 1017.8
2366 Female, age 91, both hemispheres 912.8
2167 Male, age 76, both hemispheres 892.6
Reticulotegmental nucleus
nTPM: 1054.5
2325 Male, age 76, both hemispheres 1280.6
2322 Female, age 91, both hemispheres 1052.0
2452 Male, age 74, both hemispheres 978.9
2333 Male, age 80, both hemispheres 906.3
Spinal trigeminal nucleus, caudal
nTPM: 990.9
2390 Female, age 91, both hemispheres 1640.0
2642 Male, age 74, both hemispheres 899.9
2447 Male, age 76, both hemispheres 862.6
2308 Male, age 80, both hemispheres 841.6
2312 Male, age 61, both hemispheres 710.4
Spinal trigeminal nucleus, interpolar
nTPM: 1353.8
2625 Male, age 61, both hemispheres 2221.6
2066 Male, age 76, right hemisphere 1537.5
2389 Female, age 91, both hemispheres 1077.6
2033 Male, age 80, both hemispheres 1054.8
2386 Female, age 85, both hemispheres 877.6
Spinal trigeminal nucleus, oral
nTPM: 1034.4
2164 Male, age 80, both hemispheres 1225.5
2737 Female, age 85, both hemispheres 1103.9
1978 Male, age 76, both hemispheres 773.8
Spinal vestibular nucleus
nTPM: 1013.5
2186 Female, age 91, both hemispheres 1096.7
2384 Male, age 74, both hemispheres 1074.0
2780 Male, age 80, both hemispheres 1055.1
2806 Female, age 85, both hemispheres 978.7
2796 Male, age 61, both hemispheres 975.3
2748 Male, age 76, both hemispheres 901.2
Subcoeruleus area
nTPM: 1050.7
2323 Female, age 91, left hemisphere 1191.9
2089 Male, age 76, left hemisphere 1152.1
1958 Male, age 80, both hemispheres 1125.6
2369 Female, age 85, left hemisphere 896.0
2451 Male, age 74, both hemispheres 887.7
Superior olive
nTPM: 1073.9
1875 Female, age 85, both hemispheres 1282.3
2020 Male, age 76, both hemispheres 1233.4
2329 Male, age 80, right hemisphere 974.8
2561 Female, age 91, both hemispheres 941.4
2364 Male, age 74, right hemisphere 937.6
Superior vestibular nucleus
nTPM: 886.8
2015 Male, age 80, both hemispheres 1115.5
2061 Male, age 76, both hemispheres 828.6
2383 Male, age 74, both hemispheres 716.4
Ventral medullary reticular nucleus
nTPM: 842.8
2060 Male, age 76, both hemispheres 882.4
2372 Male, age 61, both hemispheres 803.3
Ventral periolivary nuclei
nTPM: 1134.6
2130 Female, age 85, both hemispheres 1195.9
2023 Male, age 76, both hemispheres 1187.8
2165 Male, age 80, both hemispheres 1176.4
2794 Female, age 91, left hemisphere 978.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1027.0
2741 Female, age 85, both hemispheres 1121.7
2302 Female, age 91, both hemispheres 1096.3
1986 Male, age 76, both hemispheres 1040.1
2180 Male, age 61, both hemispheres 980.7
2118 Male, age 80, both hemispheres 896.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1050.9
1959 Male, age 76, both hemispheres 1222.7
2840 Female, age 85, both hemispheres 1129.3
2449 Male, age 74, both hemispheres 1100.2
2161 Male, age 80, both hemispheres 1024.7
2359 Male, age 61, both hemispheres 920.9
2456 Female, age 91, both hemispheres 907.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 5776.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2538.0
FF:10182-103D2 60 years, female 3189.1
FF:10165-103B3 76 years, female 1886.8
Medulla oblongata
Scaled Tags Per Million: 2532.5
FF:10038-101F2 18-64 years, mixed 3544.9
FF:10174-103C3 60 years, female 2368.7
FF:10155-103A2 76 years, female 1683.9
Pons
Scaled Tags Per Million: 5776.1
FF:10033-101E6 18-54 years, mixed 5776.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 853.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 727.9
Samples: 4

Max nTPM: 1076.3
Min nTPM: 498.7
Sample A Female 568.5
Sample B Female 768.1
Sample C Male 1076.3
Sample D Male 498.7
Pons
nTPM: 853.1
Samples: 4

Max nTPM: 1011.6
Min nTPM: 727.6
Sample A Female 727.6
Sample B Female 834.6
Sample C Male 1011.6
Sample D Male 838.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1358.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1358.2
Samples: 4

Max nTPM: 1397.7
Min nTPM: 1326.1
Sample A Male 1326.1
Sample B Male 1359.9
Sample C Female 1397.7
Sample D Female 1349.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 21.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 21.1
77465048 Antisense, RP_070129_03_A07, Mouse strain C57BL/6J (56 days, male) 21.1
Pons
Expression energy: 20.4
77465048 Antisense, RP_070129_03_A07, Mouse strain C57BL/6J (56 days, male) 20.4

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