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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:570.1 nTPM
HPA Brain:901.1 nTPM
GTEx:570.1 nTPM
FANTOM5:2158.3 Scaled Tags Per Million
Pig:948.6 nTPM
Mouse:1593.5 nTPM
Allen mouse:26.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001830Antibody HPA071013Antibody CAB000360
Glial cells MediumNot detectedNot detected
Neuronal cells MediumNot detectedNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

901.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 452.4
1781 Male, age 74, unknown 650.7
2288 Male, age 75, left hemisphere 649.6
1857 Female, age 85, left hemisphere 545.0
1854 Male, age 80, left hemisphere 436.7
2290 Female, age 72, unknown 424.7
2846 Female, age 79, unknown 399.2
2289 Male, age 61, right hemisphere 268.9
2481 Female, age 94, left hemisphere 244.6
Globus pallidus, externus
nTPM: 149.2
2772 Female, age 79, unknown 317.9
1996 Male, age 80, right hemisphere 125.4
2395 Male, age 75, both hemispheres 113.2
2567 Female, age 72, unknown 95.1
2646 Male, age 61, right hemisphere 94.4
Globus pallidus, internus
nTPM: 147.7
1818 Male, age 74, unknown 367.7
2037 Male, age 80, right hemisphere 170.9
2483 Female, age 94, right hemisphere 150.9
2566 Female, age 72, unknown 143.3
2111 Female, age 85, right hemisphere 94.1
2287 Male, age 75, right hemisphere 57.2
2778 Female, age 91, both hemispheres 49.9
Nucleus accumbens
nTPM: 446.6
1856 Female, age 91, right hemisphere 826.0
1783 Male, age 74, unknown 535.3
2286 Male, age 75, left hemisphere 519.4
1806 Female, age 85, left hemisphere 490.0
2824 Male, age 61, right hemisphere 476.1
2698 Female, age 72, unknown 373.2
2391 Female, age 94, left hemisphere 217.6
2732 Male, age 80, right hemisphere 135.5
Nucleus basalis of Meynert
nTPM: 315.9
2393 Male, age 80, right hemisphere 453.8
2821 Male, age 75, both hemispheres 415.1
2484 Female, age 94, left hemisphere 323.3
2569 Male, age 61, both hemispheres 71.3
Nucleus of the diagonal band
nTPM: 852.7
1812 Female, age 91, both hemispheres 1216.5
2029 Male, age 61, right hemisphere 1002.3
2775 Male, age 80, right hemisphere 995.6
2195 Female, age 85, both hemispheres 806.6
1979 Male, age 74, unknown 242.6
Putamen
nTPM: 410.2
1937 Female, age 91, right hemisphere 691.2
1838 Male, age 80, right hemisphere 584.8
1829 Male, age 74, unknown 485.0
2466 Female, age 79, unknown 367.0
2647 Male, age 75, left hemisphere 287.2
2482 Female, age 94, left hemisphere 257.9
2489 Female, age 72, unknown 198.5
Septal nuclei
nTPM: 693.8
2629 Female, age 94, right hemisphere 1122.4
2031 Female, age 72, unknown 1002.9
1960 Male, age 74, unknown 905.8
2009 Female, age 91, both hemispheres 881.5
2059 Female, age 85, both hemispheres 500.4
2394 Male, age 61, left hemisphere 269.5
2199 Male, age 80, right hemisphere 174.0
Stria terminalis, bed nucleus
nTPM: 901.1
1974 Female, age 91, both hemispheres 1316.1
2486 Female, age 94, both hemispheres 1093.9
2201 Male, age 74, unknown 293.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

570.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 560.0
Samples: 246

Max nTPM: 2380.4
Min nTPM: 18.4
Std nTPM: 379.6
Median nTPM: 526.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2380.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1780.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1529.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1439.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1425.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1393.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1237.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1226.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1222.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1217.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1204.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1182.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1182.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1175.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1154.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1154.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1148.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1128.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1114.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1108.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1092.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1066.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1054.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1046.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1039.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1026.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1024.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1024.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1020.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1019.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1002.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 988.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 986.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 984.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 982.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 972.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 967.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 963.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 960.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 958.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 956.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 946.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 926.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 925.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 919.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 917.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 910.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 906.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 898.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 894.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 889.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 888.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 876.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 867.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 852.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 850.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 845.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 843.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 841.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 839.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 836.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 830.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 824.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 815.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 812.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 811.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 807.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 794.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 780.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 780.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 778.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 777.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 776.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 770.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 763.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 759.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 756.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 742.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 741.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 738.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 733.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 725.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 724.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 718.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 715.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 696.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 696.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 695.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 693.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 690.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 688.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 686.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 683.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 675.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 673.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 672.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 671.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 652.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 647.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 634.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 632.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 632.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 632.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 631.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 618.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 614.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 605.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 602.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 588.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 583.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 582.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 574.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 568.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 564.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 561.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 556.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 548.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 548.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 542.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 542.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 540.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 537.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 526.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 525.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 524.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 515.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 513.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 479.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 478.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 476.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 469.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 469.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 465.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 465.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 464.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 463.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 457.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 445.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 445.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 441.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 439.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 437.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 433.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 429.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 428.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 428.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 425.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 411.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 410.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 400.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 389.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 388.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 387.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 379.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 377.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 376.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 360.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 358.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 355.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 336.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 336.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 331.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 330.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 320.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 311.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 304.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 302.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 301.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 300.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 291.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 284.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 279.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 278.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 272.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 268.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 262.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 259.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 257.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 256.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 256.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 239.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 238.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 236.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 235.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 234.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 231.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 224.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 222.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 219.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 217.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 210.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 204.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 204.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 203.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 201.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 196.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 195.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 191.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 182.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 172.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 168.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 167.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 162.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 160.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 154.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 153.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 153.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 147.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 141.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 129.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 128.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 126.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 125.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 124.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 119.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 114.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 113.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 112.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 108.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 98.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 95.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 92.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 79.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 77.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 74.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 72.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 69.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 60.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 58.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 57.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 50.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 36.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 34.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 18.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 570.1
Samples: 246

Max nTPM: 1384.5
Min nTPM: 28.8
Std nTPM: 294.9
Median nTPM: 612.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1384.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1217.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1189.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1110.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1105.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1098.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1090.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1059.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1032.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1023.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 999.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 984.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 979.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 979.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 978.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 967.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 960.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 954.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 952.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 947.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 940.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 935.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 935.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 931.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 925.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 922.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 921.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 917.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 916.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 915.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 911.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 910.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 910.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 902.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 901.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 895.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 895.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 894.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 893.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 892.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 886.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 878.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 877.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 868.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 866.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 860.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 857.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 850.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 835.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 832.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 822.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 818.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 815.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 810.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 805.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 798.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 791.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 789.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 788.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 787.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 786.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 786.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 784.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 783.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 779.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 776.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 774.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 772.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 771.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 770.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 769.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 761.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 761.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 760.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 756.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 754.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 746.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 744.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 744.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 742.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 740.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 736.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 727.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 727.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 726.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 726.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 724.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 714.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 707.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 706.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 704.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 703.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 694.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 694.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 693.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 684.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 684.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 682.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 677.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 677.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 676.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 671.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 670.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 664.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 661.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 660.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 657.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 654.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 649.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 645.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 644.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 640.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 639.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 635.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 634.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 632.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 632.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 625.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 625.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 621.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 620.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 616.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 616.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 608.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 605.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 603.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 601.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 596.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 587.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 586.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 586.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 582.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 581.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 579.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 573.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 562.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 562.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 559.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 556.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 556.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 553.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 548.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 539.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 538.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 533.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 530.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 526.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 525.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 505.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 505.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 502.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 501.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 497.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 494.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 492.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 490.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 490.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 488.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 486.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 484.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 484.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 469.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 454.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 447.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 443.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 443.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 438.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 427.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 414.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 412.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 409.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 403.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 402.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 397.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 392.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 388.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 383.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 382.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 374.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 367.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 364.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 363.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 355.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 355.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 355.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 351.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 341.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 335.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 318.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 317.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 316.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 307.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 294.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 272.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 262.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 245.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 240.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 239.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 230.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 228.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 221.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 214.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 208.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 207.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 204.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 201.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 193.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 187.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 183.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 173.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 171.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 155.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 155.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 153.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 152.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 143.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 141.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 132.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 123.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 119.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 113.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 111.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 105.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 104.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 103.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 101.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 98.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 96.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 96.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 93.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 93.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 93.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 92.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 91.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 79.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 75.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 74.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 70.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 61.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 51.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 50.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 47.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 45.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 38.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 37.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 28.8
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Brain - Putamen (basal ganglia)
Average nTPM: 521.4
Samples: 205

Max nTPM: 1906.7
Min nTPM: 12.9
Std nTPM: 361.4
Median nTPM: 489.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1906.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1358.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1328.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1325.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1292.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1276.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1274.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1153.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1142.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1135.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1123.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1115.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1098.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1068.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1067.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1066.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1063.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1062.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1058.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1056.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1047.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1046.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1042.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1030.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1009.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1006.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 998.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 995.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 976.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 974.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 967.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 966.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 963.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 944.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 944.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 941.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 929.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 918.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 899.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 893.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 870.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 853.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 836.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 834.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 818.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 810.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 809.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 806.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 804.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 799.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 793.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 765.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 762.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 755.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 752.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 748.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 737.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 730.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 712.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 695.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 693.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 676.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 674.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 673.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 652.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 649.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 644.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 639.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 631.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 624.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 624.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 612.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 606.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 604.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 599.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 597.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 594.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 593.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 593.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 592.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 590.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 584.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 579.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 579.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 579.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 578.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 574.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 573.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 572.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 567.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 541.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 538.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 533.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 527.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 525.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 513.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 512.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 507.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 502.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 501.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 501.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 494.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 489.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 469.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 460.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 459.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 459.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 450.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 437.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 435.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 434.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 420.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 416.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 412.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 409.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 407.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 397.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 396.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 396.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 395.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 391.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 389.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 388.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 376.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 364.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 363.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 359.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 358.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 348.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 346.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 335.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 333.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 319.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 317.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 305.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 303.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 301.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 301.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 279.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 276.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 275.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 269.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 261.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 251.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 250.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 245.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 243.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 230.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 225.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 216.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 213.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 209.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 208.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 204.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 202.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 201.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 190.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 189.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 189.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 178.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 175.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 172.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 171.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 168.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 166.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 161.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 155.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 147.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 146.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 144.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 135.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 128.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 122.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 121.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 120.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 108.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 107.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 106.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 106.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 95.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 92.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 90.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 90.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 85.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 81.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 80.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 79.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 76.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 63.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 57.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 54.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 44.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 40.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 36.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 33.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 28.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 28.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 26.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 18.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2158.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 897.3
FF:10164-103B2 76 years, female 897.3
Nucleus accumbens
Scaled Tags Per Million: 2158.3
FF:10037-101F1 23-56 years, mixed 2158.3
Putamen
Scaled Tags Per Million: 1368.7
FF:10176-103C5 60 years, female 1368.7
Globus pallidus
Scaled Tags Per Million: 399.3
FF:10175-103C4 60 years, female 595.6
FF:10161-103A8 76 years, female 203.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

948.6
Pig sample Sample description nTPM
Caudate
nTPM: 784.1
Samples: 4

Max nTPM: 949.5
Min nTPM: 719.6
Sample A Female 733.9
Sample B Female 719.6
Sample C Male 949.5
Sample D Male 733.5
Putamen
nTPM: 948.6
Samples: 4

Max nTPM: 1514.0
Min nTPM: 473.3
Sample A Female 473.3
Sample B Female 895.4
Sample C Male 1514.0
Sample D Male 911.8
Septum
nTPM: 509.6
Samples: 4

Max nTPM: 590.6
Min nTPM: 414.4
Sample A Female 590.6
Sample B Female 533.7
Sample C Male 499.6
Sample D Male 414.4
Ventral pallidum
nTPM: 615.9
Samples: 4

Max nTPM: 687.0
Min nTPM: 545.6
Sample A Female 687.0
Sample B Female 622.6
Sample C Male 608.4
Sample D Male 545.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1593.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1307.5
Samples: 4

Max nTPM: 1516.2
Min nTPM: 1176.5
Sample A Male 1249.1
Sample B Male 1176.5
Sample C Female 1516.2
Sample D Female 1288.2
Septum
nTPM: 1094.6
Samples: 4

Max nTPM: 1208.6
Min nTPM: 966.8
Sample A Male 1208.6
Sample B Male 1125.5
Sample C Female 1077.5
Sample D Female 966.8
Ventral forebrain
nTPM: 1593.5
Samples: 4

Max nTPM: 1752.6
Min nTPM: 1467.7
Sample A Male 1752.6
Sample B Male 1484.8
Sample C Female 1467.7
Sample D Female 1668.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 26.7
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 26.7
Pallidum
Expression energy: 25.8
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 25.8

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