PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		13.068
Mouse brain, Intensity
Ponsi 		19.845
RNA expressioni
HPA Brain:1334.3 nTPM
FANTOM5:3585.3 Scaled Tags Per Million
Pig:978.1 nTPM
Mouse:2574.1 nTPM
Allen mouse:19.3 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA001830
Medulla oblongata mean intensity 13.068
intensityi
FRONT BACK
Nucleus of the solitary tract 9.810
Raphe magnus nucleus 0.956
Cochlear nucleus 9.315
Lateral paragigantocellular nucleus 10.158
Raphe pallidus nucleus 0.161
Facial nucleus 4.734
Hypoglossal nucleus -
Ambiguus nucleus 13.068
External cuneate nucleus -
Inferior olivary nucleus 0.479
Raphe obscures nucleus 8.751
Dorsal motor nucleus of vagus 4.212
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 7.281
Parabrachial nucleus 19.845
Principle sensory trigeminal nucleus 12.420
Locus coeruleus -
Pontine nucleus -
Vestibular nucleus 4.069
Pontine reticular nucleus, oral -
Lateral lemniscus 9.654
Superior paraolivary nucleus 5.246

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1334.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 495.1
1984 Male, age 76, both hemispheres 702.1
2301 Female, age 85, both hemispheres 543.6
2188 Female, age 91, both hemispheres 468.0
2090 Male, age 80, both hemispheres 266.9
Area postrema
nTPM: 135.9
2054 Male, age 76, both hemispheres 271.1
2306 Male, age 80, both hemispheres 77.2
2799 Male, age 61, both hemispheres 59.3
Dorsal cochlear nucleus
nTPM: 324.2
2058 Male, age 76, both hemispheres 400.6
2187 Female, age 91, both hemispheres 373.0
2370 Male, age 61, both hemispheres 372.5
2378 Male, age 80, both hemispheres 262.1
2802 Male, age 74, right hemisphere 212.5
Dorsal medullary reticular nucleus
nTPM: 523.5
2040 Female, age 85, both hemispheres 697.1
2373 Male, age 61, both hemispheres 469.1
2088 Male, age 76, both hemispheres 404.4
Dorsal motor vagal complex
nTPM: 372.7
2133 Female, age 91, both hemispheres 794.4
2000 Male, age 74, unknown 574.6
2813 Female, age 72, unknown 322.3
2844 Male, age 55, unknown 313.9
2807 Female, age 85, both hemispheres 287.7
2797 Male, age 61, both hemispheres 277.2
2185 Male, age 76, both hemispheres 239.9
2643 Male, age 74, both hemispheres 171.4
Dorsal tegmental nucleus
nTPM: 366.1
2083 Male, age 80, both hemispheres 429.4
1936 Male, age 76, left hemisphere 403.8
2358 Male, age 61, both hemispheres 389.4
2326 Male, age 74, both hemispheres 241.9
Dorsolateral tegmental area
nTPM: 297.2
2654 Male, age 80, both hemispheres 406.0
2751 Female, age 85, both hemispheres 357.0
2141 Male, age 76, both hemispheres 324.8
2360 Male, age 74, both hemispheres 283.3
2337 Male, age 61, both hemispheres 114.9
Gigantocellular reticular nuclei, medullary
nTPM: 597.1
2462 Male, age 74, both hemispheres 1330.8
2022 Male, age 76, right hemisphere 573.0
2310 Male, age 80, both hemispheres 562.7
1876 Female, age 85, both hemispheres 504.7
2387 Female, age 91, both hemispheres 362.5
2314 Male, age 61, both hemispheres 249.1
Gigantocellular reticular nuclei, pars
nTPM: 625.2
2168 Male, age 76, both hemispheres 1065.9
2084 Female, age 85, both hemispheres 555.7
2336 Male, age 61, both hemispheres 518.7
2330 Male, age 80, both hemispheres 498.5
2706 Male, age 80, both hemispheres 487.4
Inferior olive
nTPM: 163.9
2085 Female, age 85, both hemispheres 267.6
2628 Female, age 91, both hemispheres 242.7
2178 Male, age 61, both hemispheres 121.4
2563 Male, age 74, both hemispheres 116.3
2379 Male, age 80, both hemispheres 71.3
Kolliker-Fuse nucleus
nTPM: 478.8
2793 Female, age 91, left hemisphere 573.7
2163 Male, age 80, both hemispheres 533.4
2315 Male, age 76, right hemisphere 329.3
Lateral lemniscal nuclei
nTPM: 954.0
2169 Male, age 76, both hemispheres 1241.4
2453 Male, age 74, right hemisphere 1149.9
2036 Male, age 80, both hemispheres 933.9
2746 Female, age 85, left hemisphere 806.4
2320 Female, age 91, left hemisphere 638.4
Lateral medullary reticular nucleus
nTPM: 370.9
2044 Male, age 76, both hemispheres 834.3
2190 Female, age 85, both hemispheres 342.4
2305 Male, age 74, both hemispheres 318.9
2804 Female, age 91, both hemispheres 303.8
2374 Male, age 61, both hemispheres 238.9
2852 Male, age 80, both hemispheres 187.1
Lateral parabrachial nucleus
nTPM: 571.7
2139 Female, age 85, right hemisphere 1013.3
2790 Male, age 61, both hemispheres 541.2
2013 Male, age 80, both hemispheres 519.8
2792 Male, age 76, both hemispheres 212.6
Lateral vestibular nucleus
nTPM: 435.6
2184 Male, age 76, both hemispheres 534.9
2311 Male, age 80, both hemispheres 336.4
Locus coeruleus
nTPM: 529.1
2720 Male, age 74, both hemispheres 864.7
2123 Female, age 91, both hemispheres 835.0
2788 Male, age 74, unknown 433.1
2014 Male, age 55, unknown 425.6
2162 Male, age 80, both hemispheres 418.0
1980 Male, age 76, both hemispheres 375.3
2317 Female, age 72, unknown 352.1
Medial olivary nucleus
nTPM: 141.2
2851 Male, age 80, both hemispheres 257.6
1962 Male, age 76, both hemispheres 194.7
2138 Female, age 91, both hemispheres 58.7
1943 Male, age 61, both hemispheres 53.8
Medial parabrachial nucleus
nTPM: 452.4
2854 Male, age 80, both hemispheres 666.0
2156 Male, age 61, both hemispheres 491.7
2463 Female, age 85, right hemisphere 382.9
2786 Male, age 76, both hemispheres 362.8
2170 Female, age 91, both hemispheres 358.8
Medial periolivary nuclei
nTPM: 883.4
2171 Female, age 85, both hemispheres 1477.7
2063 Male, age 76, both hemispheres 1257.7
2791 Male, age 74, right hemisphere 720.3
2458 Female, age 91, both hemispheres 527.0
2081 Male, age 80, both hemispheres 434.1
Medial vestibular nucleus
nTPM: 690.0
2743 Female, age 85, both hemispheres 782.3
2801 Male, age 74, both hemispheres 763.3
2803 Female, age 91, both hemispheres 700.2
2624 Male, age 61, both hemispheres 663.0
2134 Male, age 76, both hemispheres 633.2
2093 Male, age 80, both hemispheres 598.1
Motor facial nucleus
nTPM: 886.1
2062 Male, age 76, both hemispheres 1295.8
2365 Male, age 74, right hemisphere 1055.8
2327 Male, age 80, both hemispheres 983.8
2697 Female, age 85, both hemispheres 922.0
2126 Male, age 61, both hemispheres 553.3
2795 Female, age 91, both hemispheres 505.7
Motor hypoglossal nucleus
nTPM: 551.6
2125 Female, age 91, both hemispheres 844.7
2132 Female, age 85, both hemispheres 678.2
2461 Male, age 61, both hemispheres 651.7
2182 Male, age 80, both hemispheres 321.0
2277 Male, age 76, both hemispheres 262.5
Motor trigeminal nucleus
nTPM: 543.6
2079 Male, age 80, both hemispheres 841.9
2560 Male, age 74, both hemispheres 507.0
2335 Male, age 61, both hemispheres 485.2
2321 Female, age 91, both hemispheres 468.1
2309 Male, age 76, both hemispheres 415.8
Nuclei of the trapezoid body
nTPM: 1240.6
2159 Male, age 61, both hemispheres 2241.7
2735 Female, age 85, both hemispheres 1396.4
1983 Male, age 76, both hemispheres 1182.8
2166 Male, age 80, both hemispheres 774.1
2368 Female, age 91, both hemispheres 607.8
Nucleus ambiguus
nTPM: 381.5
2096 Female, age 85, both hemispheres 601.7
2071 Male, age 76, both hemispheres 161.3
Nucleus cuneatus
nTPM: 368.7
2131 Male, age 76, both hemispheres 713.7
2100 Male, age 76, both hemispheres 543.9
2376 Male, age 61, both hemispheres 516.4
2564 Male, age 74, both hemispheres 385.4
2562 Male, age 61, both hemispheres 385.3
2381 Male, age 80, both hemispheres 312.5
2808 Female, age 85, both hemispheres 199.0
2805 Female, age 91, both hemispheres 142.6
2380 Male, age 80, both hemispheres 119.6
Nucleus gracilis
nTPM: 137.7
2627 Male, age 74, both hemispheres 198.7
2382 Male, age 80, both hemispheres 107.9
2299 Female, age 85, both hemispheres 106.6
Nucleus raphe magnus
nTPM: 1334.3
2160 Male, age 61, both hemispheres 2345.6
2455 Male, age 74, both hemispheres 1721.3
2172 Female, age 85, both hemispheres 1546.5
2328 Male, age 80, both hemispheres 901.2
2051 Male, age 76, both hemispheres 784.2
2459 Female, age 91, both hemispheres 706.9
Nucleus raphe obscurus
nTPM: 262.9
2800 Male, age 61, midline 418.1
2845 Female, age 85, midline 317.7
2142 Male, age 76, midline 52.8
Nucleus raphe pallidus
nTPM: 346.6
1924 Male, age 61, midline 502.1
2183 Male, age 80, midline 400.9
2145 Male, age 76, midline 136.8
Nucleus tractus solitarii
nTPM: 446.8
2144 Female, age 91, right hemisphere 943.9
2656 Male, age 76, both hemispheres 325.8
2191 Female, age 85, both hemispheres 276.3
2307 Male, age 80, both hemispheres 241.1
Paramedian reticular nucleus
nTPM: 716.1
2050 Female, age 85, both hemispheres 1134.2
2313 Male, age 61, both hemispheres 743.4
2057 Male, age 80, both hemispheres 582.1
2052 Male, age 76, both hemispheres 404.8
Parvicellular reticular nuclei
nTPM: 633.1
2558 Male, age 74, both hemispheres 801.2
2095 Male, age 76, both hemispheres 648.9
2119 Male, age 80, both hemispheres 449.1
Parvicellular reticular nuclei, medullary
nTPM: 572.4
2189 Female, age 91, both hemispheres 683.0
2091 Female, age 85, both hemispheres 573.5
2181 Male, age 80, left hemisphere 460.7
Pedunculopontine tegmental nucleus
nTPM: 440.1
2338 Male, age 61, both hemispheres 510.7
1921 Female, age 85, both hemispheres 417.4
2334 Male, age 80, both hemispheres 392.3
Peritrigeminal nucleus
nTPM: 743.5
2179 Male, age 61, both hemispheres 936.2
2136 Male, age 76, both hemispheres 726.7
2067 Female, age 85, both hemispheres 567.7
Pontine nuclei
nTPM: 1176.6
2727 Male, age 61, right hemisphere 2202.2
1863 Male, age 55, unknown 1498.7
2787 Female, age 85, both hemispheres 1385.3
2109 Female, age 72, unknown 1261.2
1968 Male, age 76, left hemisphere 1073.5
2454 Male, age 74, left hemisphere 965.5
2115 Male, age 80, left hemisphere 562.4
2319 Female, age 91, both hemispheres 464.1
Pontine raphe nucleus
nTPM: 687.5
2122 Female, age 85, midline 995.6
2853 Male, age 76, midline 379.4
Posteroventral cochlear nucleus
nTPM: 388.2
2752 Female, age 85, both hemispheres 768.6
2070 Male, age 76, both hemispheres 512.0
2371 Male, age 61, both hemispheres 332.8
2341 Male, age 80, both hemispheres 293.5
2135 Female, age 91, both hemispheres 34.0
Prepositus hypoglossal nucleus
nTPM: 553.1
2855 Female, age 85, right hemisphere 666.5
2086 Male, age 80, both hemispheres 439.8
Principal sensory trigeminal nucleus
nTPM: 968.2
2158 Male, age 61, both hemispheres 1867.7
2008 Male, age 80, left hemisphere 1008.5
2367 Female, age 91, left hemisphere 542.0
2324 Male, age 76, both hemispheres 454.6
Reticular pontine nucleus, caudal
nTPM: 666.7
2332 Male, age 80, right hemisphere 1049.0
2092 Male, age 76, both hemispheres 809.3
2457 Female, age 91, both hemispheres 503.9
2559 Male, age 74, both hemispheres 304.5
Reticular pontine nucleus, oral
nTPM: 588.8
2361 Male, age 74, both hemispheres 946.3
2012 Female, age 85, both hemispheres 774.7
2366 Female, age 91, both hemispheres 494.5
2167 Male, age 76, both hemispheres 379.8
1939 Male, age 80, both hemispheres 348.7
Reticulotegmental nucleus
nTPM: 561.9
2325 Male, age 76, both hemispheres 712.2
2333 Male, age 80, both hemispheres 577.4
2322 Female, age 91, both hemispheres 535.2
2452 Male, age 74, both hemispheres 422.9
Spinal trigeminal nucleus, caudal
nTPM: 548.8
2390 Female, age 91, both hemispheres 790.3
2447 Male, age 76, both hemispheres 683.4
2642 Male, age 74, both hemispheres 450.8
2312 Male, age 61, both hemispheres 445.1
2308 Male, age 80, both hemispheres 374.0
Spinal trigeminal nucleus, interpolar
nTPM: 851.1
2066 Male, age 76, right hemisphere 1156.4
2389 Female, age 91, both hemispheres 1000.0
2625 Male, age 61, both hemispheres 826.8
2386 Female, age 85, both hemispheres 706.0
2033 Male, age 80, both hemispheres 566.4
Spinal trigeminal nucleus, oral
nTPM: 527.3
2737 Female, age 85, both hemispheres 641.4
2164 Male, age 80, both hemispheres 495.5
1978 Male, age 76, both hemispheres 445.0
Spinal vestibular nucleus
nTPM: 541.9
2186 Female, age 91, both hemispheres 807.9
2796 Male, age 61, both hemispheres 586.0
2806 Female, age 85, both hemispheres 556.8
2780 Male, age 80, both hemispheres 552.2
2748 Male, age 76, both hemispheres 475.9
2384 Male, age 74, both hemispheres 272.5
Subcoeruleus area
nTPM: 566.3
2323 Female, age 91, left hemisphere 769.1
2089 Male, age 76, left hemisphere 742.3
1958 Male, age 80, both hemispheres 728.5
2451 Male, age 74, both hemispheres 330.1
2369 Female, age 85, left hemisphere 261.4
Superior olive
nTPM: 865.6
1875 Female, age 85, both hemispheres 1256.6
2364 Male, age 74, right hemisphere 908.3
2329 Male, age 80, right hemisphere 769.2
2020 Male, age 76, both hemispheres 724.6
2561 Female, age 91, both hemispheres 669.2
Superior vestibular nucleus
nTPM: 345.7
2015 Male, age 80, both hemispheres 411.4
2061 Male, age 76, both hemispheres 330.3
2383 Male, age 74, both hemispheres 295.3
Ventral medullary reticular nucleus
nTPM: 373.8
2060 Male, age 76, both hemispheres 432.6
2372 Male, age 61, both hemispheres 314.9
Ventral periolivary nuclei
nTPM: 993.1
2130 Female, age 85, both hemispheres 1254.8
2165 Male, age 80, both hemispheres 1105.2
2794 Female, age 91, left hemisphere 911.4
2023 Male, age 76, both hemispheres 700.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 564.9
2741 Female, age 85, both hemispheres 821.3
1986 Male, age 76, both hemispheres 800.6
2302 Female, age 91, both hemispheres 490.2
2180 Male, age 61, both hemispheres 449.9
2118 Male, age 80, both hemispheres 262.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 708.9
2449 Male, age 74, both hemispheres 1354.1
1959 Male, age 76, both hemispheres 817.1
2840 Female, age 85, both hemispheres 753.7
2161 Male, age 80, both hemispheres 676.4
2456 Female, age 91, both hemispheres 343.5
2359 Male, age 61, both hemispheres 308.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3585.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 922.4
FF:10182-103D2 60 years, female 1229.2
FF:10165-103B3 76 years, female 615.5
Medulla oblongata
Scaled Tags Per Million: 587.3
FF:10038-101F2 18-64 years, mixed 796.4
FF:10155-103A2 76 years, female 597.6
FF:10174-103C3 60 years, female 367.8
Pons
Scaled Tags Per Million: 3585.3
FF:10033-101E6 18-54 years, mixed 3585.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 978.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 626.8
Samples: 4

Max nTPM: 793.2
Min nTPM: 361.9
Sample A Female 793.2
Sample B Female 737.4
Sample C Male 614.8
Sample D Male 361.9
Pons
nTPM: 978.1
Samples: 4

Max nTPM: 1653.4
Min nTPM: 497.7
Sample A Female 1061.8
Sample B Female 497.7
Sample C Male 699.6
Sample D Male 1653.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2574.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2574.1
Samples: 4

Max nTPM: 2654.5
Min nTPM: 2526.5
Sample A Male 2549.1
Sample B Male 2654.5
Sample C Female 2526.5
Sample D Female 2566.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 19.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 19.3
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 19.3
Pons
Expression energy: 18.1
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 18.1

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