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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:748.4 nTPM
HPA Brain:460.0 nTPM
GTEx:748.4 nTPM
FANTOM5:23.1 Scaled Tags Per Million
Mouse:791.7 nTPM
Allen mouse:19.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055133
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

460.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 460.0
2846 Female, age 79, unknown 582.0
2290 Female, age 72, unknown 554.1
1857 Female, age 85, left hemisphere 498.2
1781 Male, age 74, unknown 467.6
1854 Male, age 80, left hemisphere 458.1
2481 Female, age 94, left hemisphere 397.9
2289 Male, age 61, right hemisphere 371.6
2288 Male, age 75, left hemisphere 350.8
Globus pallidus, externus
nTPM: 443.4
1996 Male, age 80, right hemisphere 533.2
2395 Male, age 75, both hemispheres 473.2
2772 Female, age 79, unknown 432.9
2646 Male, age 61, right hemisphere 397.5
2567 Female, age 72, unknown 380.5
Globus pallidus, internus
nTPM: 434.5
2483 Female, age 94, right hemisphere 517.7
2287 Male, age 75, right hemisphere 486.6
2037 Male, age 80, right hemisphere 462.2
2566 Female, age 72, unknown 407.6
1818 Male, age 74, unknown 398.2
2778 Female, age 91, both hemispheres 389.2
2111 Female, age 85, right hemisphere 379.7
Nucleus accumbens
nTPM: 433.0
2698 Female, age 72, unknown 529.1
1783 Male, age 74, unknown 500.3
1806 Female, age 85, left hemisphere 498.2
1856 Female, age 91, right hemisphere 464.0
2391 Female, age 94, left hemisphere 396.8
2732 Male, age 80, right hemisphere 376.0
2286 Male, age 75, left hemisphere 361.9
2824 Male, age 61, right hemisphere 337.3
Nucleus basalis of Meynert
nTPM: 447.0
2821 Male, age 75, both hemispheres 482.8
2569 Male, age 61, both hemispheres 445.2
2484 Female, age 94, left hemisphere 437.4
2393 Male, age 80, right hemisphere 422.7
Nucleus of the diagonal band
nTPM: 320.3
1812 Female, age 91, both hemispheres 364.4
1979 Male, age 74, unknown 334.0
2195 Female, age 85, both hemispheres 320.7
2775 Male, age 80, right hemisphere 307.9
2029 Male, age 61, right hemisphere 274.6
Putamen
nTPM: 453.8
2489 Female, age 72, unknown 522.4
2466 Female, age 79, unknown 481.9
2482 Female, age 94, left hemisphere 477.3
1937 Female, age 91, right hemisphere 435.9
2647 Male, age 75, left hemisphere 433.6
1838 Male, age 80, right hemisphere 422.3
1829 Male, age 74, unknown 403.2
Septal nuclei
nTPM: 353.5
2199 Male, age 80, right hemisphere 449.0
2031 Female, age 72, unknown 372.4
2394 Male, age 61, left hemisphere 345.6
1960 Male, age 74, unknown 332.8
2059 Female, age 85, both hemispheres 329.5
2009 Female, age 91, both hemispheres 323.5
2629 Female, age 94, right hemisphere 321.6
Stria terminalis, bed nucleus
nTPM: 298.1
1974 Female, age 91, both hemispheres 318.4
2201 Male, age 74, unknown 297.9
2486 Female, age 94, both hemispheres 278.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

748.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 684.0
Samples: 246

Max nTPM: 1623.3
Min nTPM: 271.2
Std nTPM: 183.3
Median nTPM: 660.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1623.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1370.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1195.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1174.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1160.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1141.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1119.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1103.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1075.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1073.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1062.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1027.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1008.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 991.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 939.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 938.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 932.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 925.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 920.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 920.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 919.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 916.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 911.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 891.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 889.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 880.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 877.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 861.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 859.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 854.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 853.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 850.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 850.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 849.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 848.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 847.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 846.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 846.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 844.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 842.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 841.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 841.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 841.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 839.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 838.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 838.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 838.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 832.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 827.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 826.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 819.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 811.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 810.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 810.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 809.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 803.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 802.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 800.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 799.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 796.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 795.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 794.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 789.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 787.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 785.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 784.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 784.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 779.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 778.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 773.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 772.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 770.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 763.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 756.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 756.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 754.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 754.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 751.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 747.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 745.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 743.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 743.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 742.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 739.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 738.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 732.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 730.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 726.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 725.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 723.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 722.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 720.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 718.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 717.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 716.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 714.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 714.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 712.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 712.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 710.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 709.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 708.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 707.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 705.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 704.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 704.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 703.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 701.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 699.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 698.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 695.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 694.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 692.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 688.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 685.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 684.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 683.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 674.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 673.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 671.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 669.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 666.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 660.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 660.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 658.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 657.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 654.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 653.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 653.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 650.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 649.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 649.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 649.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 649.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 644.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 643.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 643.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 642.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 639.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 639.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 639.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 638.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 638.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 629.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 628.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 627.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 624.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 619.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 617.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 612.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 609.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 607.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 607.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 607.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 607.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 605.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 605.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 604.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 603.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 600.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 599.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 599.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 598.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 595.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 594.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 593.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 593.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 591.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 589.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 580.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 579.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 578.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 574.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 573.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 571.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 571.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 570.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 570.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 565.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 565.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 562.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 561.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 559.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 558.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 555.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 554.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 552.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 551.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 548.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 546.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 539.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 534.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 531.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 531.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 530.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 529.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 529.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 527.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 527.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 526.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 524.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 523.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 519.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 518.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 517.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 514.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 514.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 514.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 513.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 513.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 508.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 504.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 501.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 501.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 500.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 498.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 495.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 490.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 488.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 487.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 485.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 485.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 478.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 468.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 467.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 466.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 461.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 458.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 449.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 445.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 440.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 440.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 432.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 432.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 431.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 418.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 417.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 415.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 414.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 400.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 399.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 388.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 354.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 334.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 296.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 271.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 726.3
Samples: 246

Max nTPM: 2593.0
Min nTPM: 355.5
Std nTPM: 293.1
Median nTPM: 663.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2593.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2133.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2023.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1526.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1526.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1497.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1414.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1412.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1394.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1270.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1254.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1242.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1239.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1226.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1221.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1193.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1191.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1158.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1155.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1151.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1128.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1088.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1077.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1071.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1056.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1050.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1042.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1039.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1013.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 991.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 984.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 983.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 979.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 979.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 976.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 967.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 957.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 956.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 954.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 941.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 938.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 930.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 924.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 922.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 920.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 910.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 902.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 900.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 897.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 896.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 894.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 890.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 889.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 886.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 879.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 873.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 864.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 859.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 856.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 850.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 847.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 847.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 841.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 837.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 835.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 818.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 813.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 804.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 800.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 798.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 796.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 796.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 793.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 790.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 787.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 786.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 783.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 782.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 781.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 776.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 775.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 775.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 770.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 753.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 752.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 748.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 747.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 745.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 744.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 737.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 736.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 735.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 735.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 732.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 731.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 729.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 727.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 727.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 723.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 717.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 717.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 712.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 711.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 708.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 704.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 703.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 702.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 699.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 697.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 688.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 687.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 686.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 684.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 683.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 681.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 676.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 674.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 671.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 671.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 668.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 665.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 665.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 664.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 663.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 662.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 656.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 655.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 652.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 651.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 651.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 649.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 643.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 642.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 642.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 640.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 637.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 637.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 636.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 634.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 632.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 628.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 626.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 623.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 620.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 620.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 618.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 612.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 611.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 606.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 604.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 602.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 602.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 600.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 598.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 598.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 595.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 593.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 592.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 592.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 587.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 587.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 585.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 585.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 584.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 582.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 579.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 577.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 577.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 575.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 572.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 571.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 566.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 562.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 560.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 552.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 550.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 547.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 545.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 543.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 543.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 536.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 533.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 533.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 531.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 528.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 527.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 527.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 527.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 525.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 523.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 519.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 518.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 516.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 515.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 511.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 504.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 496.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 495.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 493.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 492.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 488.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 487.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 485.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 483.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 478.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 471.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 467.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 466.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 460.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 460.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 460.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 459.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 459.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 459.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 451.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 449.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 447.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 447.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 447.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 446.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 446.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 443.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 443.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 441.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 439.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 438.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 437.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 437.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 437.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 436.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 436.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 435.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 435.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 427.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 421.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 420.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 413.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 394.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 390.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 387.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 386.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 381.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 377.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 376.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 372.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 355.5
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Brain - Putamen (basal ganglia)
Average nTPM: 748.4
Samples: 205

Max nTPM: 1526.4
Min nTPM: 345.6
Std nTPM: 202.4
Median nTPM: 706.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1526.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1355.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1341.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1288.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1257.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1233.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1224.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1200.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1190.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1126.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1122.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1110.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1091.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1084.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1082.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1081.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1080.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1059.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1049.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1047.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1039.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1029.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1029.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1017.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1005.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1004.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1001.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 970.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 962.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 946.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 946.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 944.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 937.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 934.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 925.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 923.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 919.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 918.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 914.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 912.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 906.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 905.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 904.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 902.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 893.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 882.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 879.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 878.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 871.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 868.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 862.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 859.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 857.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 852.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 846.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 846.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 845.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 841.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 833.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 826.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 821.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 820.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 820.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 807.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 806.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 801.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 799.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 797.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 795.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 789.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 788.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 787.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 785.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 783.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 780.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 778.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 775.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 774.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 773.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 772.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 769.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 768.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 768.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 765.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 763.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 762.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 760.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 756.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 754.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 749.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 749.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 745.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 740.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 738.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 738.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 737.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 732.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 726.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 718.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 717.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 714.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 711.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 706.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 704.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 704.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 702.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 701.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 701.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 692.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 689.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 687.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 687.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 685.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 685.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 680.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 679.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 677.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 676.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 675.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 672.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 670.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 668.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 668.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 666.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 664.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 661.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 660.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 658.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 657.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 654.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 651.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 644.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 640.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 639.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 638.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 637.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 637.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 636.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 633.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 632.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 630.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 630.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 625.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 619.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 617.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 613.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 608.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 608.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 605.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 603.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 602.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 598.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 597.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 595.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 594.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 594.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 590.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 587.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 583.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 580.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 580.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 579.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 579.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 574.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 573.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 566.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 566.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 560.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 558.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 556.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 555.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 553.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 551.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 549.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 546.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 544.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 543.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 538.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 537.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 533.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 531.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 530.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 528.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 528.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 526.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 523.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 522.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 519.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 514.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 514.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 514.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 513.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 512.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 511.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 487.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 480.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 479.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 477.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 474.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 468.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 464.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 459.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 451.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 431.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 345.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

23.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 23.1
FF:10164-103B2 76 years, female 23.1
Nucleus accumbens
Scaled Tags Per Million: 11.3
FF:10037-101F1 23-56 years, mixed 11.3
Putamen
Scaled Tags Per Million: 14.0
FF:10176-103C5 60 years, female 14.0
Globus pallidus
Scaled Tags Per Million: 14.1
FF:10161-103A8 76 years, female 16.5
FF:10175-103C4 60 years, female 11.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

791.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 791.7
Samples: 4

Max nTPM: 901.0
Min nTPM: 724.6
Sample A Male 724.6
Sample B Male 814.0
Sample C Female 727.2
Sample D Female 901.0
Septum
nTPM: 675.4
Samples: 4

Max nTPM: 761.2
Min nTPM: 609.9
Sample A Male 621.4
Sample B Male 761.2
Sample C Female 709.2
Sample D Female 609.9
Ventral forebrain
nTPM: 711.4
Samples: 4

Max nTPM: 943.0
Min nTPM: 623.5
Sample A Male 628.0
Sample B Male 651.0
Sample C Female 943.0
Sample D Female 623.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.1
100146146 Antisense, RP_110623_01_A03, Mouse strain C57BL/6J (56 days, male) 19.1
Pallidum
Expression energy: 17.7
100146146 Antisense, RP_110623_01_A03, Mouse strain C57BL/6J (56 days, male) 17.7

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