We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
502.0
nTPM
FANTOM5:
13.9
Scaled Tags Per Million
Allen mouse:
12.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
502.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 405.2
2090
Male, age 80, both hemispheres
467.4
2188
Female, age 91, both hemispheres
423.8
2301
Female, age 85, both hemispheres
415.3
1984
Male, age 76, both hemispheres
314.5
Dorsal cochlear nucleus nTPM: 440.0
2378
Male, age 80, both hemispheres
475.4
2187
Female, age 91, both hemispheres
464.5
2802
Male, age 74, right hemisphere
452.5
2058
Male, age 76, both hemispheres
426.6
2370
Male, age 61, both hemispheres
380.7
Dorsal tegmental nucleus nTPM: 502.0
2358
Male, age 61, both hemispheres
794.9
2326
Male, age 74, both hemispheres
432.9
2083
Male, age 80, both hemispheres
411.5
1936
Male, age 76, left hemisphere
368.8
Dorsolateral tegmental area nTPM: 451.7
2337
Male, age 61, both hemispheres
831.0
2654
Male, age 80, both hemispheres
410.8
2360
Male, age 74, both hemispheres
349.9
2141
Male, age 76, both hemispheres
336.8
2751
Female, age 85, both hemispheres
329.9
Kolliker-Fuse nucleus nTPM: 427.9
2315
Male, age 76, right hemisphere
487.8
2793
Female, age 91, left hemisphere
407.2
2163
Male, age 80, both hemispheres
388.7
Lateral lemniscal nuclei nTPM: 357.9
2746
Female, age 85, left hemisphere
386.7
2036
Male, age 80, both hemispheres
380.5
2169
Male, age 76, both hemispheres
362.5
2320
Female, age 91, left hemisphere
334.7
2453
Male, age 74, right hemisphere
325.3
Lateral parabrachial nucleus nTPM: 473.8
2792
Male, age 76, both hemispheres
569.1
2790
Male, age 61, both hemispheres
461.4
2013
Male, age 80, both hemispheres
454.4
2139
Female, age 85, right hemisphere
410.4
Lateral vestibular nucleus nTPM: 433.9
2311
Male, age 80, both hemispheres
524.3
2184
Male, age 76, both hemispheres
343.4
Locus coeruleus nTPM: 370.7
2720
Male, age 74, both hemispheres
462.2
2123
Female, age 91, both hemispheres
392.6
2162
Male, age 80, both hemispheres
388.9
2317
Female, age 72, unknown
355.7
1980
Male, age 76, both hemispheres
339.5
2014
Male, age 55, unknown
333.1
2788
Male, age 74, unknown
323.2
Medial parabrachial nucleus nTPM: 415.2
2170
Female, age 91, both hemispheres
461.9
2156
Male, age 61, both hemispheres
459.8
2854
Male, age 80, both hemispheres
446.0
2786
Male, age 76, both hemispheres
373.3
2463
Female, age 85, right hemisphere
334.9
Medial periolivary nuclei nTPM: 363.5
2081
Male, age 80, both hemispheres
423.6
2063
Male, age 76, both hemispheres
399.8
2458
Female, age 91, both hemispheres
347.3
2791
Male, age 74, right hemisphere
325.6
2171
Female, age 85, both hemispheres
321.5
Motor facial nucleus nTPM: 365.8
2697
Female, age 85, both hemispheres
405.7
2365
Male, age 74, right hemisphere
399.8
2795
Female, age 91, both hemispheres
379.5
2062
Male, age 76, both hemispheres
354.3
2126
Male, age 61, both hemispheres
347.8
2327
Male, age 80, both hemispheres
307.6
Motor trigeminal nucleus nTPM: 364.7
2335
Male, age 61, both hemispheres
441.3
2560
Male, age 74, both hemispheres
374.9
2321
Female, age 91, both hemispheres
353.1
2309
Male, age 76, both hemispheres
331.1
2079
Male, age 80, both hemispheres
323.2
Nuclei of the trapezoid body nTPM: 332.7
1983
Male, age 76, both hemispheres
402.0
2166
Male, age 80, both hemispheres
351.7
2735
Female, age 85, both hemispheres
309.7
2368
Female, age 91, both hemispheres
304.6
2159
Male, age 61, both hemispheres
295.7
Nucleus raphe magnus nTPM: 353.7
2051
Male, age 76, both hemispheres
455.4
2459
Female, age 91, both hemispheres
362.0
2172
Female, age 85, both hemispheres
353.9
2328
Male, age 80, both hemispheres
339.5
2455
Male, age 74, both hemispheres
332.3
2160
Male, age 61, both hemispheres
279.3
Paramedian reticular nucleus nTPM: 375.9
2052
Male, age 76, both hemispheres
422.2
2050
Female, age 85, both hemispheres
367.6
2057
Male, age 80, both hemispheres
360.0
2313
Male, age 61, both hemispheres
354.0
Pedunculopontine tegmental nucleus nTPM: 470.1
2338
Male, age 61, both hemispheres
713.5
2334
Male, age 80, both hemispheres
410.1
1921
Female, age 85, both hemispheres
286.7
Pontine nuclei nTPM: 353.2
2319
Female, age 91, both hemispheres
406.4
2115
Male, age 80, left hemisphere
404.8
2787
Female, age 85, both hemispheres
398.9
1863
Male, age 55, unknown
361.2
1968
Male, age 76, left hemisphere
352.6
2109
Female, age 72, unknown
321.1
2454
Male, age 74, left hemisphere
310.2
2727
Male, age 61, right hemisphere
270.6
Pontine raphe nucleus nTPM: 342.3
2853
Male, age 76, midline
364.6
2122
Female, age 85, midline
320.1
Posteroventral cochlear nucleus nTPM: 423.7
2341
Male, age 80, both hemispheres
495.9
2371
Male, age 61, both hemispheres
466.9
2135
Female, age 91, both hemispheres
442.1
2070
Male, age 76, both hemispheres
380.6
2752
Female, age 85, both hemispheres
332.8
Principal sensory trigeminal nucleus nTPM: 330.3
2367
Female, age 91, left hemisphere
370.2
2324
Male, age 76, both hemispheres
367.0
2158
Male, age 61, both hemispheres
301.5
2008
Male, age 80, left hemisphere
282.6
Reticular pontine nucleus, caudal nTPM: 347.6
2092
Male, age 76, both hemispheres
397.9
2457
Female, age 91, both hemispheres
384.1
2559
Male, age 74, both hemispheres
327.8
2332
Male, age 80, right hemisphere
280.3
Reticular pontine nucleus, oral nTPM: 348.6
2167
Male, age 76, both hemispheres
407.2
1939
Male, age 80, both hemispheres
377.0
2366
Female, age 91, both hemispheres
356.2
2012
Female, age 85, both hemispheres
318.0
2361
Male, age 74, both hemispheres
284.9
Reticulotegmental nucleus nTPM: 367.9
2452
Male, age 74, both hemispheres
420.3
2322
Female, age 91, both hemispheres
371.1
2333
Male, age 80, both hemispheres
365.5
2325
Male, age 76, both hemispheres
314.6
Spinal trigeminal nucleus, oral nTPM: 352.9
2164
Male, age 80, both hemispheres
410.0
1978
Male, age 76, both hemispheres
345.4
2737
Female, age 85, both hemispheres
303.4
Subcoeruleus area nTPM: 364.8
2451
Male, age 74, both hemispheres
434.2
2369
Female, age 85, left hemisphere
371.3
2323
Female, age 91, left hemisphere
350.9
1958
Male, age 80, both hemispheres
344.8
2089
Male, age 76, left hemisphere
323.1
Superior olive nTPM: 345.4
2020
Male, age 76, both hemispheres
405.7
2561
Female, age 91, both hemispheres
376.1
2364
Male, age 74, right hemisphere
351.4
2329
Male, age 80, right hemisphere
320.9
1875
Female, age 85, both hemispheres
273.2
Ventral periolivary nuclei nTPM: 369.0
2023
Male, age 76, both hemispheres
414.7
2794
Female, age 91, left hemisphere
378.7
2165
Male, age 80, both hemispheres
349.6
2130
Female, age 85, both hemispheres
333.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 393.1
2359
Male, age 61, both hemispheres
477.4
2161
Male, age 80, both hemispheres
433.3
2840
Female, age 85, both hemispheres
404.3
1959
Male, age 76, both hemispheres
360.2
2456
Female, age 91, both hemispheres
351.2
2449
Male, age 74, both hemispheres
332.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
