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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:536.9 nTPM
FANTOM5:246.2 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

536.9
Sample id Sample description nTPM
Area postrema
nTPM: 536.9
2799 Male, age 61, both hemispheres 861.3
2306 Male, age 80, both hemispheres 392.2
2054 Male, age 76, both hemispheres 357.2
Dorsal medullary reticular nucleus
nTPM: 241.0
2373 Male, age 61, both hemispheres 258.9
2088 Male, age 76, both hemispheres 250.2
2040 Female, age 85, both hemispheres 214.0
Dorsal motor vagal complex
nTPM: 366.4
2813 Female, age 72, unknown 464.0
2807 Female, age 85, both hemispheres 460.0
2797 Male, age 61, both hemispheres 435.5
2185 Male, age 76, both hemispheres 373.2
2643 Male, age 74, both hemispheres 352.7
2844 Male, age 55, unknown 309.8
2133 Female, age 91, both hemispheres 289.8
2000 Male, age 74, unknown 246.7
Gigantocellular reticular nuclei, medullary
nTPM: 253.9
2310 Male, age 80, both hemispheres 276.4
2314 Male, age 61, both hemispheres 269.2
2462 Male, age 74, both hemispheres 263.3
2022 Male, age 76, right hemisphere 258.6
1876 Female, age 85, both hemispheres 228.0
2387 Female, age 91, both hemispheres 227.9
Gigantocellular reticular nuclei, pars
nTPM: 257.5
2706 Male, age 80, both hemispheres 294.9
2330 Male, age 80, both hemispheres 286.5
2336 Male, age 61, both hemispheres 278.1
2084 Female, age 85, both hemispheres 233.2
2168 Male, age 76, both hemispheres 194.8
Inferior olive
nTPM: 330.9
2178 Male, age 61, both hemispheres 355.6
2379 Male, age 80, both hemispheres 353.0
2628 Female, age 91, both hemispheres 343.0
2563 Male, age 74, both hemispheres 321.7
2085 Female, age 85, both hemispheres 281.1
Lateral medullary reticular nucleus
nTPM: 289.9
2190 Female, age 85, both hemispheres 333.9
2374 Male, age 61, both hemispheres 299.6
2852 Male, age 80, both hemispheres 289.1
2044 Male, age 76, both hemispheres 284.9
2804 Female, age 91, both hemispheres 276.7
2305 Male, age 74, both hemispheres 255.6
Medial olivary nucleus
nTPM: 336.6
1962 Male, age 76, both hemispheres 369.5
2851 Male, age 80, both hemispheres 355.9
2138 Female, age 91, both hemispheres 323.6
1943 Male, age 61, both hemispheres 297.6
Medial vestibular nucleus
nTPM: 278.5
2624 Male, age 61, both hemispheres 413.4
2134 Male, age 76, both hemispheres 324.5
2093 Male, age 80, both hemispheres 250.1
2801 Male, age 74, both hemispheres 228.5
2803 Female, age 91, both hemispheres 227.6
2743 Female, age 85, both hemispheres 226.9
Motor hypoglossal nucleus
nTPM: 274.4
2461 Male, age 61, both hemispheres 350.6
2277 Male, age 76, both hemispheres 285.5
2182 Male, age 80, both hemispheres 275.0
2125 Female, age 91, both hemispheres 236.0
2132 Female, age 85, both hemispheres 225.0
Nucleus ambiguus
nTPM: 317.7
2071 Male, age 76, both hemispheres 380.3
2096 Female, age 85, both hemispheres 255.1
Nucleus cuneatus
nTPM: 354.7
2564 Male, age 74, both hemispheres 541.7
2808 Female, age 85, both hemispheres 471.1
2562 Male, age 61, both hemispheres 439.8
2805 Female, age 91, both hemispheres 349.1
2376 Male, age 61, both hemispheres 347.7
2380 Male, age 80, both hemispheres 286.2
2381 Male, age 80, both hemispheres 266.1
2100 Male, age 76, both hemispheres 254.7
2131 Male, age 76, both hemispheres 235.7
Nucleus gracilis
nTPM: 411.9
2299 Female, age 85, both hemispheres 520.8
2627 Male, age 74, both hemispheres 438.9
2382 Male, age 80, both hemispheres 276.0
Nucleus raphe obscurus
nTPM: 318.7
2142 Male, age 76, midline 405.1
2800 Male, age 61, midline 302.6
2845 Female, age 85, midline 248.4
Nucleus raphe pallidus
nTPM: 416.4
1924 Male, age 61, midline 621.4
2183 Male, age 80, midline 331.4
2145 Male, age 76, midline 296.5
Nucleus tractus solitarii
nTPM: 335.1
2191 Female, age 85, both hemispheres 599.4
2656 Male, age 76, both hemispheres 287.0
2307 Male, age 80, both hemispheres 277.9
2144 Female, age 91, right hemisphere 176.3
Parvicellular reticular nuclei
nTPM: 266.6
2119 Male, age 80, both hemispheres 301.2
2095 Male, age 76, both hemispheres 287.4
2558 Male, age 74, both hemispheres 211.3
Parvicellular reticular nuclei, medullary
nTPM: 340.5
2091 Female, age 85, both hemispheres 466.4
2181 Male, age 80, left hemisphere 281.2
2189 Female, age 91, both hemispheres 273.8
Peritrigeminal nucleus
nTPM: 405.3
2067 Female, age 85, both hemispheres 573.9
2136 Male, age 76, both hemispheres 363.3
2179 Male, age 61, both hemispheres 278.8
Prepositus hypoglossal nucleus
nTPM: 263.5
2086 Male, age 80, both hemispheres 300.1
2855 Female, age 85, right hemisphere 226.9
Spinal trigeminal nucleus, caudal
nTPM: 310.6
2642 Male, age 74, both hemispheres 400.6
2312 Male, age 61, both hemispheres 340.5
2308 Male, age 80, both hemispheres 313.3
2390 Female, age 91, both hemispheres 256.7
2447 Male, age 76, both hemispheres 241.7
Spinal trigeminal nucleus, interpolar
nTPM: 293.8
2386 Female, age 85, both hemispheres 368.2
2625 Male, age 61, both hemispheres 314.8
2033 Male, age 80, both hemispheres 297.6
2066 Male, age 76, right hemisphere 270.4
2389 Female, age 91, both hemispheres 218.1
Spinal vestibular nucleus
nTPM: 277.8
2796 Male, age 61, both hemispheres 338.0
2780 Male, age 80, both hemispheres 302.7
2748 Male, age 76, both hemispheres 300.1
2384 Male, age 74, both hemispheres 255.2
2806 Female, age 85, both hemispheres 249.6
2186 Female, age 91, both hemispheres 221.4
Superior vestibular nucleus
nTPM: 339.6
2061 Male, age 76, both hemispheres 416.6
2383 Male, age 74, both hemispheres 303.4
2015 Male, age 80, both hemispheres 298.7
Ventral medullary reticular nucleus
nTPM: 249.3
2372 Male, age 61, both hemispheres 253.6
2060 Male, age 76, both hemispheres 244.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 308.2
2741 Female, age 85, both hemispheres 398.6
1986 Male, age 76, both hemispheres 316.4
2180 Male, age 61, both hemispheres 293.4
2302 Female, age 91, both hemispheres 285.1
2118 Male, age 80, both hemispheres 247.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

246.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 246.2
FF:10038-101F2 18-64 years, mixed 358.1
FF:10155-103A2 76 years, female 306.6
FF:10174-103C3 60 years, female 74.0

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