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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
440.3
nTPM
FANTOM5:
173.1
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
440.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 272.3
2090
Male, age 80, both hemispheres
304.7
2301
Female, age 85, both hemispheres
300.2
1984
Male, age 76, both hemispheres
246.0
2188
Female, age 91, both hemispheres
238.5
Dorsal cochlear nucleus nTPM: 320.6
2802
Male, age 74, right hemisphere
350.7
2370
Male, age 61, both hemispheres
332.6
2378
Male, age 80, both hemispheres
313.4
2187
Female, age 91, both hemispheres
304.7
2058
Male, age 76, both hemispheres
301.6
Dorsal tegmental nucleus nTPM: 440.3
2358
Male, age 61, both hemispheres
786.5
1936
Male, age 76, left hemisphere
347.8
2083
Male, age 80, both hemispheres
347.6
2326
Male, age 74, both hemispheres
279.3
Dorsolateral tegmental area nTPM: 384.1
2337
Male, age 61, both hemispheres
775.6
2654
Male, age 80, both hemispheres
343.9
2141
Male, age 76, both hemispheres
322.8
2360
Male, age 74, both hemispheres
255.3
2751
Female, age 85, both hemispheres
222.7
Kolliker-Fuse nucleus nTPM: 428.8
2315
Male, age 76, right hemisphere
583.3
2163
Male, age 80, both hemispheres
455.4
2793
Female, age 91, left hemisphere
247.5
Lateral lemniscal nuclei nTPM: 209.9
2169
Male, age 76, both hemispheres
228.8
2453
Male, age 74, right hemisphere
223.4
2320
Female, age 91, left hemisphere
211.2
2746
Female, age 85, left hemisphere
203.7
2036
Male, age 80, both hemispheres
182.3
Lateral parabrachial nucleus nTPM: 352.5
2792
Male, age 76, both hemispheres
497.1
2790
Male, age 61, both hemispheres
355.3
2139
Female, age 85, right hemisphere
305.3
2013
Male, age 80, both hemispheres
252.2
Lateral vestibular nucleus nTPM: 311.0
2311
Male, age 80, both hemispheres
319.3
2184
Male, age 76, both hemispheres
302.8
Locus coeruleus nTPM: 280.1
2123
Female, age 91, both hemispheres
309.9
1980
Male, age 76, both hemispheres
306.6
2720
Male, age 74, both hemispheres
290.1
2317
Female, age 72, unknown
282.8
2162
Male, age 80, both hemispheres
275.2
2014
Male, age 55, unknown
260.3
2788
Male, age 74, unknown
235.6
Medial parabrachial nucleus nTPM: 306.8
2156
Male, age 61, both hemispheres
439.1
2786
Male, age 76, both hemispheres
322.2
2170
Female, age 91, both hemispheres
301.9
2854
Male, age 80, both hemispheres
292.9
2463
Female, age 85, right hemisphere
177.9
Medial periolivary nuclei nTPM: 224.2
2791
Male, age 74, right hemisphere
276.0
2458
Female, age 91, both hemispheres
218.6
2063
Male, age 76, both hemispheres
216.8
2081
Male, age 80, both hemispheres
207.4
2171
Female, age 85, both hemispheres
202.0
Motor facial nucleus nTPM: 249.5
2795
Female, age 91, both hemispheres
318.4
2126
Male, age 61, both hemispheres
291.6
2365
Male, age 74, right hemisphere
239.0
2697
Female, age 85, both hemispheres
221.9
2327
Male, age 80, both hemispheres
217.2
2062
Male, age 76, both hemispheres
208.8
Motor trigeminal nucleus nTPM: 291.8
2335
Male, age 61, both hemispheres
433.7
2560
Male, age 74, both hemispheres
295.0
2309
Male, age 76, both hemispheres
290.6
2321
Female, age 91, both hemispheres
235.8
2079
Male, age 80, both hemispheres
203.7
Nuclei of the trapezoid body nTPM: 195.5
1983
Male, age 76, both hemispheres
250.4
2368
Female, age 91, both hemispheres
204.8
2166
Male, age 80, both hemispheres
191.1
2735
Female, age 85, both hemispheres
171.2
2159
Male, age 61, both hemispheres
160.2
Nucleus raphe magnus nTPM: 217.3
2051
Male, age 76, both hemispheres
270.0
2455
Male, age 74, both hemispheres
253.3
2459
Female, age 91, both hemispheres
235.6
2328
Male, age 80, both hemispheres
227.3
2160
Male, age 61, both hemispheres
165.0
2172
Female, age 85, both hemispheres
152.4
Paramedian reticular nucleus nTPM: 237.3
2052
Male, age 76, both hemispheres
272.9
2313
Male, age 61, both hemispheres
254.1
2057
Male, age 80, both hemispheres
229.4
2050
Female, age 85, both hemispheres
192.9
Pedunculopontine tegmental nucleus nTPM: 378.6
2338
Male, age 61, both hemispheres
544.1
2334
Male, age 80, both hemispheres
385.8
1921
Female, age 85, both hemispheres
206.0
Pontine nuclei nTPM: 199.6
2319
Female, age 91, both hemispheres
240.2
1863
Male, age 55, unknown
235.1
2115
Male, age 80, left hemisphere
215.0
2787
Female, age 85, both hemispheres
208.5
1968
Male, age 76, left hemisphere
207.1
2454
Male, age 74, left hemisphere
188.5
2109
Female, age 72, unknown
160.1
2727
Male, age 61, right hemisphere
142.3
Pontine raphe nucleus nTPM: 249.0
2853
Male, age 76, midline
295.2
2122
Female, age 85, midline
202.9
Posteroventral cochlear nucleus nTPM: 273.2
2341
Male, age 80, both hemispheres
316.5
2371
Male, age 61, both hemispheres
311.2
2135
Female, age 91, both hemispheres
277.6
2070
Male, age 76, both hemispheres
258.9
2752
Female, age 85, both hemispheres
201.6
Principal sensory trigeminal nucleus nTPM: 223.7
2324
Male, age 76, both hemispheres
351.3
2367
Female, age 91, left hemisphere
208.0
2008
Male, age 80, left hemisphere
167.8
2158
Male, age 61, both hemispheres
167.6
Reticular pontine nucleus, caudal nTPM: 226.6
2092
Male, age 76, both hemispheres
295.4
2559
Male, age 74, both hemispheres
228.3
2332
Male, age 80, right hemisphere
196.2
2457
Female, age 91, both hemispheres
186.4
Reticular pontine nucleus, oral nTPM: 248.8
1939
Male, age 80, both hemispheres
335.5
2167
Male, age 76, both hemispheres
317.0
2366
Female, age 91, both hemispheres
203.7
2361
Male, age 74, both hemispheres
202.6
2012
Female, age 85, both hemispheres
185.2
Reticulotegmental nucleus nTPM: 291.7
2333
Male, age 80, both hemispheres
312.6
2322
Female, age 91, both hemispheres
291.9
2452
Male, age 74, both hemispheres
286.2
2325
Male, age 76, both hemispheres
276.0
Spinal trigeminal nucleus, oral nTPM: 300.5
2737
Female, age 85, both hemispheres
364.7
2164
Male, age 80, both hemispheres
301.2
1978
Male, age 76, both hemispheres
235.7
Subcoeruleus area nTPM: 290.4
2451
Male, age 74, both hemispheres
396.4
2323
Female, age 91, left hemisphere
339.0
1958
Male, age 80, both hemispheres
268.1
2369
Female, age 85, left hemisphere
231.9
2089
Male, age 76, left hemisphere
216.8
Superior olive nTPM: 222.6
2364
Male, age 74, right hemisphere
259.2
2561
Female, age 91, both hemispheres
239.0
2020
Male, age 76, both hemispheres
229.7
2329
Male, age 80, right hemisphere
221.5
1875
Female, age 85, both hemispheres
163.3
Ventral periolivary nuclei nTPM: 231.5
2794
Female, age 91, left hemisphere
255.8
2130
Female, age 85, both hemispheres
244.6
2023
Male, age 76, both hemispheres
220.4
2165
Male, age 80, both hemispheres
205.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 282.7
2359
Male, age 61, both hemispheres
433.8
2840
Female, age 85, both hemispheres
274.8
2456
Female, age 91, both hemispheres
270.1
1959
Male, age 76, both hemispheres
252.1
2161
Male, age 80, both hemispheres
246.7
2449
Male, age 74, both hemispheres
218.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
