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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:467.7 nTPM
HPA Brain:742.4 nTPM
GTEx:467.7 nTPM
FANTOM5:1372.7 Scaled Tags Per Million
Pig:559.6 nTPM
Mouse:1066.9 nTPM
Allen mouse:19.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001462Antibody CAB000157
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

742.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 665.3
2288 Male, age 75, left hemisphere 825.0
2846 Female, age 79, unknown 730.7
1781 Male, age 74, unknown 690.9
2290 Female, age 72, unknown 682.8
1857 Female, age 85, left hemisphere 672.7
2481 Female, age 94, left hemisphere 627.5
1854 Male, age 80, left hemisphere 597.8
2289 Male, age 61, right hemisphere 495.0
Globus pallidus, externus
nTPM: 641.5
2395 Male, age 75, both hemispheres 756.7
2772 Female, age 79, unknown 756.1
1996 Male, age 80, right hemisphere 717.0
2567 Female, age 72, unknown 490.2
2646 Male, age 61, right hemisphere 487.5
Globus pallidus, internus
nTPM: 723.2
2287 Male, age 75, right hemisphere 1059.7
2483 Female, age 94, right hemisphere 731.2
2778 Female, age 91, both hemispheres 716.9
2111 Female, age 85, right hemisphere 694.3
1818 Male, age 74, unknown 680.9
2566 Female, age 72, unknown 612.8
2037 Male, age 80, right hemisphere 566.9
Nucleus accumbens
nTPM: 742.4
1856 Female, age 91, right hemisphere 889.7
2698 Female, age 72, unknown 827.4
1783 Male, age 74, unknown 787.5
2286 Male, age 75, left hemisphere 737.9
2391 Female, age 94, left hemisphere 733.5
1806 Female, age 85, left hemisphere 725.6
2824 Male, age 61, right hemisphere 685.4
2732 Male, age 80, right hemisphere 552.3
Nucleus basalis of Meynert
nTPM: 575.5
2821 Male, age 75, both hemispheres 702.4
2484 Female, age 94, left hemisphere 601.9
2393 Male, age 80, right hemisphere 545.5
2569 Male, age 61, both hemispheres 452.1
Nucleus of the diagonal band
nTPM: 700.4
1812 Female, age 91, both hemispheres 812.0
2775 Male, age 80, right hemisphere 740.6
2029 Male, age 61, right hemisphere 730.6
2195 Female, age 85, both hemispheres 705.1
1979 Male, age 74, unknown 513.8
Putamen
nTPM: 639.8
1829 Male, age 74, unknown 735.7
2466 Female, age 79, unknown 711.8
1937 Female, age 91, right hemisphere 710.3
2482 Female, age 94, left hemisphere 658.1
1838 Male, age 80, right hemisphere 647.1
2647 Male, age 75, left hemisphere 519.5
2489 Female, age 72, unknown 496.0
Septal nuclei
nTPM: 656.9
2031 Female, age 72, unknown 861.4
2629 Female, age 94, right hemisphere 794.9
1960 Male, age 74, unknown 784.3
2009 Female, age 91, both hemispheres 660.8
2059 Female, age 85, both hemispheres 559.8
2394 Male, age 61, left hemisphere 509.2
2199 Male, age 80, right hemisphere 427.5
Stria terminalis, bed nucleus
nTPM: 707.8
1974 Female, age 91, both hemispheres 820.3
2486 Female, age 94, both hemispheres 748.0
2201 Male, age 74, unknown 555.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

467.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 430.0
Samples: 246

Max nTPM: 718.1
Min nTPM: 216.7
Std nTPM: 119.1
Median nTPM: 416.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 718.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 703.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 701.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 699.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 684.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 680.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 678.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 675.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 673.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 672.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 665.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 663.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 662.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 651.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 651.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 647.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 639.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 636.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 630.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 608.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 605.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 605.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 604.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 602.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 601.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 601.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 599.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 591.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 587.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 581.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 580.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 580.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 580.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 578.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 577.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 575.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 571.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 567.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 566.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 563.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 562.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 557.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 556.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 556.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 554.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 554.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 554.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 551.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 546.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 536.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 532.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 530.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 528.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 525.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 520.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 514.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 512.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 512.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 511.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 510.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 509.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 508.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 505.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 503.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 499.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 497.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 496.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 496.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 495.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 495.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 494.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 492.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 492.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 489.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 489.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 482.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 481.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 481.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 481.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 480.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 479.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 476.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 474.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 474.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 474.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 472.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 469.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 467.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 462.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 462.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 461.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 461.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 461.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 460.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 458.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 456.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 455.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 454.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 454.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 452.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 451.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 449.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 448.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 448.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 443.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 443.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 442.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 440.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 439.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 439.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 439.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 434.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 431.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 431.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 431.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 431.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 426.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 421.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 420.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 420.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 417.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 417.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 416.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 416.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 415.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 415.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 412.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 412.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 410.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 409.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 403.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 403.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 401.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 399.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 398.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 397.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 397.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 397.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 396.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 395.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 394.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 392.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 390.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 389.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 389.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 389.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 386.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 382.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 381.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 381.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 380.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 378.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 378.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 375.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 373.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 372.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 371.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 370.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 370.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 366.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 365.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 365.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 365.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 365.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 362.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 361.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 360.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 357.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 356.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 356.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 356.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 353.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 351.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 349.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 349.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 346.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 344.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 342.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 341.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 341.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 341.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 340.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 337.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 337.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 336.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 336.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 333.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 332.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 332.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 330.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 328.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 328.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 328.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 326.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 324.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 322.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 321.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 319.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 318.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 314.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 313.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 311.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 311.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 309.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 306.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 305.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 304.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 303.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 301.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 300.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 299.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 298.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 298.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 294.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 294.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 294.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 293.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 292.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 289.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 284.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 279.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 279.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 279.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 274.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 272.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 270.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 266.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 265.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 263.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 261.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 261.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 259.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 258.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 257.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 251.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 249.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 248.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 248.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 246.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 244.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 244.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 241.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 238.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 235.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 229.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 216.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 467.7
Samples: 246

Max nTPM: 877.1
Min nTPM: 161.8
Std nTPM: 149.8
Median nTPM: 475.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 877.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 806.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 795.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 793.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 787.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 776.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 773.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 769.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 767.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 756.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 737.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 721.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 712.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 710.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 709.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 704.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 702.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 701.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 693.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 688.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 687.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 682.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 680.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 671.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 666.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 666.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 655.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 650.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 647.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 640.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 637.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 636.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 634.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 633.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 633.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 632.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 631.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 630.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 624.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 622.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 621.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 620.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 615.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 611.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 610.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 603.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 602.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 601.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 598.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 598.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 597.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 596.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 595.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 595.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 595.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 582.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 574.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 570.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 569.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 562.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 559.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 559.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 558.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 558.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 554.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 553.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 550.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 547.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 546.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 545.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 543.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 541.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 541.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 540.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 539.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 538.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 538.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 536.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 532.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 531.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 530.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 529.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 527.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 527.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 526.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 524.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 524.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 523.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 523.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 523.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 522.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 520.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 518.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 518.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 517.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 517.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 514.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 511.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 510.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 509.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 507.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 504.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 504.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 503.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 501.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 501.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 497.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 496.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 496.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 494.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 493.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 492.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 488.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 486.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 485.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 484.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 483.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 481.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 479.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 477.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 477.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 475.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 475.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 474.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 470.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 469.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 469.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 468.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 466.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 466.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 466.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 465.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 464.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 461.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 460.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 458.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 458.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 456.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 455.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 455.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 454.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 454.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 454.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 450.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 446.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 441.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 441.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 439.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 438.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 438.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 426.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 421.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 420.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 418.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 413.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 412.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 412.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 411.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 410.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 403.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 393.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 392.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 392.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 391.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 391.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 391.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 390.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 389.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 385.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 384.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 383.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 382.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 379.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 375.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 374.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 373.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 371.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 371.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 370.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 370.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 369.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 366.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 362.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 362.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 359.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 355.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 352.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 348.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 348.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 345.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 342.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 339.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 338.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 336.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 334.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 329.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 326.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 308.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 305.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 304.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 304.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 302.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 293.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 291.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 287.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 285.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 284.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 284.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 282.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 279.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 278.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 276.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 274.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 272.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 270.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 264.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 263.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 262.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 262.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 262.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 260.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 258.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 257.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 256.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 255.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 255.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 253.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 250.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 250.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 250.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 245.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 244.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 243.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 242.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 240.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 231.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 231.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 228.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 227.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 223.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 210.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 202.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 177.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 170.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 168.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 161.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 444.7
Samples: 205

Max nTPM: 825.9
Min nTPM: 192.8
Std nTPM: 129.6
Median nTPM: 425.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 825.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 760.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 760.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 755.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 725.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 724.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 723.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 723.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 715.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 702.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 698.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 688.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 685.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 685.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 669.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 655.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 649.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 645.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 638.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 629.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 620.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 619.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 615.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 613.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 604.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 598.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 598.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 595.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 594.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 594.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 592.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 589.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 587.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 584.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 580.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 579.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 577.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 575.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 572.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 566.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 559.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 557.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 556.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 553.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 552.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 551.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 549.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 548.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 546.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 538.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 525.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 524.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 523.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 515.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 511.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 508.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 508.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 507.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 506.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 503.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 503.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 502.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 502.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 501.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 498.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 496.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 493.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 492.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 492.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 491.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 487.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 484.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 484.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 478.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 474.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 470.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 469.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 468.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 467.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 465.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 462.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 461.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 461.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 459.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 459.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 456.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 452.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 452.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 450.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 450.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 450.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 445.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 441.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 439.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 438.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 435.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 434.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 430.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 428.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 428.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 427.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 427.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 425.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 420.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 419.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 416.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 416.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 413.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 413.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 412.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 412.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 410.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 406.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 406.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 404.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 403.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 401.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 401.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 401.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 400.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 399.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 397.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 396.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 396.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 393.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 389.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 388.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 385.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 383.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 380.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 379.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 377.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 373.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 370.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 369.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 368.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 367.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 366.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 366.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 364.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 362.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 362.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 360.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 357.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 356.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 356.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 355.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 353.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 351.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 350.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 350.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 349.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 348.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 347.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 345.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 345.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 342.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 342.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 339.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 339.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 337.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 336.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 336.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 335.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 333.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 332.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 329.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 324.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 324.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 323.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 322.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 318.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 312.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 311.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 311.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 310.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 309.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 307.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 306.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 305.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 305.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 295.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 294.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 290.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 285.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 284.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 283.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 281.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 281.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 280.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 280.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 279.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 275.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 275.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 274.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 265.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 262.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 258.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 254.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 253.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 242.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 214.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 210.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 203.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 192.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1372.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 872.3
FF:10164-103B2 76 years, female 872.3
Nucleus accumbens
Scaled Tags Per Million: 1169.0
FF:10037-101F1 23-56 years, mixed 1169.0
Putamen
Scaled Tags Per Million: 1372.7
FF:10176-103C5 60 years, female 1372.7
Globus pallidus
Scaled Tags Per Million: 718.8
FF:10175-103C4 60 years, female 779.2
FF:10161-103A8 76 years, female 658.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

559.6
Pig sample Sample description nTPM
Caudate
nTPM: 495.4
Samples: 4

Max nTPM: 573.7
Min nTPM: 445.4
Sample A Female 445.4
Sample B Female 469.7
Sample C Male 573.7
Sample D Male 492.8
Putamen
nTPM: 559.6
Samples: 4

Max nTPM: 699.6
Min nTPM: 427.9
Sample A Female 537.5
Sample B Female 427.9
Sample C Male 699.6
Sample D Male 573.2
Septum
nTPM: 474.0
Samples: 4

Max nTPM: 545.9
Min nTPM: 409.2
Sample A Female 545.9
Sample B Female 409.2
Sample C Male 497.7
Sample D Male 443.0
Ventral pallidum
nTPM: 515.7
Samples: 4

Max nTPM: 544.6
Min nTPM: 456.7
Sample A Female 525.2
Sample B Female 456.7
Sample C Male 544.6
Sample D Male 536.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1066.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1066.9
Samples: 4

Max nTPM: 1127.1
Min nTPM: 996.6
Sample A Male 1127.1
Sample B Male 1104.4
Sample C Female 996.6
Sample D Female 1039.4
Septum
nTPM: 1004.9
Samples: 4

Max nTPM: 1022.8
Min nTPM: 973.2
Sample A Male 973.2
Sample B Male 1014.4
Sample C Female 1009.1
Sample D Female 1022.8
Ventral forebrain
nTPM: 967.6
Samples: 4

Max nTPM: 998.6
Min nTPM: 935.3
Sample A Male 935.3
Sample B Male 998.6
Sample C Female 957.4
Sample D Female 979.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.2
79591705 Antisense, RP_071218_02_B09, Mouse strain C57BL/6J (56 days, male) 31.0
106 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 26.6
107 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 22.9
70611467 Antisense, RP_050630_03_C12, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 17.3
79591705 Antisense, RP_071218_02_B09, Mouse strain C57BL/6J (56 days, male) 28.4
106 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 23.5
107 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 22.0
70611467 Antisense, RP_050630_03_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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