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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
789.2
nTPM
FANTOM5:
1045.1
Scaled Tags Per Million
Pig:
701.5
nTPM
Allen mouse:
16.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
789.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 613.3
2188
Female, age 91, both hemispheres
691.3
2301
Female, age 85, both hemispheres
656.9
2090
Male, age 80, both hemispheres
617.2
1984
Male, age 76, both hemispheres
487.8
Dorsal cochlear nucleus nTPM: 632.1
2802
Male, age 74, right hemisphere
762.4
2187
Female, age 91, both hemispheres
690.5
2378
Male, age 80, both hemispheres
580.5
2058
Male, age 76, both hemispheres
568.0
2370
Male, age 61, both hemispheres
559.2
Dorsal tegmental nucleus nTPM: 623.5
2083
Male, age 80, both hemispheres
759.9
2326
Male, age 74, both hemispheres
715.0
2358
Male, age 61, both hemispheres
535.1
1936
Male, age 76, left hemisphere
484.2
Dorsolateral tegmental area nTPM: 608.9
2654
Male, age 80, both hemispheres
698.0
2751
Female, age 85, both hemispheres
668.0
2360
Male, age 74, both hemispheres
578.8
2141
Male, age 76, both hemispheres
562.3
2337
Male, age 61, both hemispheres
537.5
Kolliker-Fuse nucleus nTPM: 652.4
2793
Female, age 91, left hemisphere
726.2
2163
Male, age 80, both hemispheres
710.1
2315
Male, age 76, right hemisphere
521.0
Lateral lemniscal nuclei nTPM: 667.8
2453
Male, age 74, right hemisphere
744.7
2169
Male, age 76, both hemispheres
724.5
2746
Female, age 85, left hemisphere
658.7
2320
Female, age 91, left hemisphere
635.1
2036
Male, age 80, both hemispheres
576.0
Lateral parabrachial nucleus nTPM: 611.7
2139
Female, age 85, right hemisphere
721.0
2013
Male, age 80, both hemispheres
632.6
2792
Male, age 76, both hemispheres
579.0
2790
Male, age 61, both hemispheres
514.0
Lateral vestibular nucleus nTPM: 602.3
2184
Male, age 76, both hemispheres
603.9
2311
Male, age 80, both hemispheres
600.7
Locus coeruleus nTPM: 615.9
2123
Female, age 91, both hemispheres
764.9
2720
Male, age 74, both hemispheres
635.9
2014
Male, age 55, unknown
616.0
2162
Male, age 80, both hemispheres
609.2
2317
Female, age 72, unknown
565.4
1980
Male, age 76, both hemispheres
563.8
2788
Male, age 74, unknown
556.2
Medial parabrachial nucleus nTPM: 617.3
2170
Female, age 91, both hemispheres
698.7
2854
Male, age 80, both hemispheres
663.7
2463
Female, age 85, right hemisphere
584.6
2156
Male, age 61, both hemispheres
580.9
2786
Male, age 76, both hemispheres
558.6
Medial periolivary nuclei nTPM: 692.7
2063
Male, age 76, both hemispheres
770.4
2791
Male, age 74, right hemisphere
751.9
2171
Female, age 85, both hemispheres
715.2
2081
Male, age 80, both hemispheres
616.0
2458
Female, age 91, both hemispheres
609.9
Motor facial nucleus nTPM: 725.3
2365
Male, age 74, right hemisphere
890.6
2062
Male, age 76, both hemispheres
762.5
2697
Female, age 85, both hemispheres
717.4
2126
Male, age 61, both hemispheres
706.5
2327
Male, age 80, both hemispheres
668.4
2795
Female, age 91, both hemispheres
606.3
Motor trigeminal nucleus nTPM: 627.8
2560
Male, age 74, both hemispheres
729.7
2079
Male, age 80, both hemispheres
650.1
2321
Female, age 91, both hemispheres
613.7
2335
Male, age 61, both hemispheres
599.2
2309
Male, age 76, both hemispheres
546.5
Nuclei of the trapezoid body nTPM: 709.8
2159
Male, age 61, both hemispheres
832.5
1983
Male, age 76, both hemispheres
766.3
2735
Female, age 85, both hemispheres
688.5
2166
Male, age 80, both hemispheres
653.4
2368
Female, age 91, both hemispheres
608.3
Nucleus raphe magnus nTPM: 738.3
2160
Male, age 61, both hemispheres
858.4
2455
Male, age 74, both hemispheres
826.7
2172
Female, age 85, both hemispheres
720.9
2459
Female, age 91, both hemispheres
694.8
2328
Male, age 80, both hemispheres
692.7
2051
Male, age 76, both hemispheres
636.0
Paramedian reticular nucleus nTPM: 656.7
2057
Male, age 80, both hemispheres
715.5
2313
Male, age 61, both hemispheres
703.5
2050
Female, age 85, both hemispheres
693.6
2052
Male, age 76, both hemispheres
514.0
Pedunculopontine tegmental nucleus nTPM: 619.3
2334
Male, age 80, both hemispheres
663.7
1921
Female, age 85, both hemispheres
624.7
2338
Male, age 61, both hemispheres
569.4
Pontine nuclei nTPM: 789.2
2454
Male, age 74, left hemisphere
954.3
1863
Male, age 55, unknown
887.8
2787
Female, age 85, both hemispheres
857.9
2109
Female, age 72, unknown
827.2
2727
Male, age 61, right hemisphere
820.4
1968
Male, age 76, left hemisphere
710.7
2319
Female, age 91, both hemispheres
641.3
2115
Male, age 80, left hemisphere
614.3
Pontine raphe nucleus nTPM: 686.4
2122
Female, age 85, midline
700.6
2853
Male, age 76, midline
672.2
Posteroventral cochlear nucleus nTPM: 625.4
2752
Female, age 85, both hemispheres
665.1
2070
Male, age 76, both hemispheres
658.6
2135
Female, age 91, both hemispheres
651.5
2341
Male, age 80, both hemispheres
614.9
2371
Male, age 61, both hemispheres
536.6
Principal sensory trigeminal nucleus nTPM: 656.1
2158
Male, age 61, both hemispheres
775.9
2367
Female, age 91, left hemisphere
664.1
2008
Male, age 80, left hemisphere
614.7
2324
Male, age 76, both hemispheres
569.7
Reticular pontine nucleus, caudal nTPM: 701.8
2559
Male, age 74, both hemispheres
773.2
2092
Male, age 76, both hemispheres
711.0
2332
Male, age 80, right hemisphere
665.7
2457
Female, age 91, both hemispheres
657.4
Reticular pontine nucleus, oral nTPM: 697.0
2361
Male, age 74, both hemispheres
856.0
2366
Female, age 91, both hemispheres
705.6
2012
Female, age 85, both hemispheres
681.6
1939
Male, age 80, both hemispheres
655.1
2167
Male, age 76, both hemispheres
586.9
Reticulotegmental nucleus nTPM: 670.8
2452
Male, age 74, both hemispheres
726.8
2322
Female, age 91, both hemispheres
712.8
2333
Male, age 80, both hemispheres
666.4
2325
Male, age 76, both hemispheres
577.4
Spinal trigeminal nucleus, oral nTPM: 603.4
2164
Male, age 80, both hemispheres
633.9
2737
Female, age 85, both hemispheres
592.3
1978
Male, age 76, both hemispheres
584.1
Subcoeruleus area nTPM: 640.5
2323
Female, age 91, left hemisphere
682.6
2369
Female, age 85, left hemisphere
668.7
1958
Male, age 80, both hemispheres
648.7
2451
Male, age 74, both hemispheres
609.2
2089
Male, age 76, left hemisphere
593.6
Superior olive nTPM: 707.7
2364
Male, age 74, right hemisphere
813.1
1875
Female, age 85, both hemispheres
753.5
2020
Male, age 76, both hemispheres
686.5
2329
Male, age 80, right hemisphere
659.8
2561
Female, age 91, both hemispheres
625.6
Ventral periolivary nuclei nTPM: 671.0
2130
Female, age 85, both hemispheres
716.6
2165
Male, age 80, both hemispheres
710.4
2023
Male, age 76, both hemispheres
703.3
2794
Female, age 91, left hemisphere
553.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 662.7
2449
Male, age 74, both hemispheres
804.9
2840
Female, age 85, both hemispheres
682.9
1959
Male, age 76, both hemispheres
652.7
2456
Female, age 91, both hemispheres
635.3
2161
Male, age 80, both hemispheres
630.8
2359
Male, age 61, both hemispheres
569.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
701.5
Pig sample
Sample description
nTPM
Pons nTPM: 701.5
Samples: 4
Max nTPM: 1253.9
Min nTPM: 434.0
Sample A
Female
1253.9
Sample B
Female
434.0
Sample C
Male
487.0
Sample D
Male
631.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
